CF835994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23 Identity = 55/150 (36.67%), Postives = 81/150 (54.00%), Query Frame = -1 Query: 219 EVGAASSDYGDPN---YPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 653 E+ S +Y D +PC GK YYGRGP+Q++WN NY G+++G D L +PD +A PVL+F++A+W+W + H+ + G+G T ING +EC AV NR+ ++ FC +FG+ PG NL C Sbjct: 141 EIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23 Identity = 59/136 (43.38%), Postives = 84/136 (61.76%), Query Frame = -1 Query: 225 NYPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGND--AVR-NRIGFFTTFCGKFGIQPGDNL 617 ++PC KY RGPIQLT N NY G+A+G DL+ NPDL+ DP++SFK+A+WFWM+ KPSCH++++ +AN A R+P G+ NII+ G+D AVR + IGF+ +C G+ G +L Sbjct: 227 DWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF-----GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.733e-21 Identity = 55/151 (36.42%), Postives = 76/151 (50.33%), Query Frame = -1 Query: 219 EVGAASSDYGDPN----YPCRGK--YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 653 E+ AS DY D YPC Y+GRGPIQL+WN NY G A D L P+ ++ D V+SFK+A+W+WM +P N+ G+G T ING +EC V+ R+ ++T +C + G+ GDNL C Sbjct: 141 EIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--------------QHVRPVINQ-------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.953e-21 Identity = 53/145 (36.55%), Postives = 76/145 (52.41%), Query Frame = -1 Query: 219 SSDYGDPN---YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 638 S+ Y DP +PC KYYGRGP+Q++WN NY G A+G D L +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG + R+G++ +C + G+ PG NL C Sbjct: 146 SNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.699e-19 Identity = 48/143 (33.57%), Postives = 72/143 (50.35%), Query Frame = -1 Query: 219 ASSDYGDPNYPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 641 A D + +PC KYYGRGP+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM N V+ G+G T ING +EC + R+G++ +C + + PG NL C Sbjct: 159 AYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of CF835994 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11 Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = -1 Query: 315 MTAQPPKPSCHEVIIDEWKPSANEVNAGRLPGYGLTTNIINGGIEC 452 MT Q KPSCH+VI + W+P+A + AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of CF835994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835994 ID=CF835994; Name=CF835994; organism=Citrus sinensis; type=EST; length=659bpback to top |