CF835995
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835995 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.467e-30 Identity = 63/129 (48.84%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 268 GKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNCNYLRCGEALGV 654 G I++R++FE +L +RN+ CPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYCF +++ + +YYGRGPIQLT NY R G+ +GV Sbjct: 28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD------------RYYGRGPIQLTHQSNYERAGQGIGV 140
BLAST of CF835995 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.467e-30 Identity = 79/195 (40.51%), Postives = 102/195 (52.31%), Query Frame = 1 Query: 94 AQNCGSPVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGD--GGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVD 657 +QNCG C CCS+FG+CG T YC GC+S G C GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA HET +C+ E+ AS DYCD N YPC GK Y+GRGPIQL+WN NY CG++L ++ Sbjct: 24 SQNCG----CAPNLCCSQFGYCGSTDAYCGTGCRS-------GPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLN 189
BLAST of CF835995 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.495e-30 Identity = 74/194 (38.14%), Postives = 106/194 (54.64%), Query Frame = 1 Query: 91 SAQNCGSPVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD---PNYPC-RGK-YYGRGPIQLTWNCNYLRCGEALGVD 657 +AQ+CG C +CCS++G+CG +DYC GCQ+ P D A + + I++ + F L+ +D C A+ FYT DAF+ AA +P+FG +G+ KREIAAFFA HET +C+ E+ S +YCD +PC GK YYGRGP+Q++WN NY G+++G D Sbjct: 24 AAQSCG----CASDQCCSKWGFCGTGSDYCGTGCQAG----------PCDVPATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFD 189
BLAST of CF835995 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.224e-29 Identity = 68/140 (48.57%), Postives = 86/140 (61.43%), Query Frame = 1 Query: 241 GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNCNYLRCGEALGVD 657 G A G +G +I++ +F +L R++ +CPAR FYTYDAFI AA +FPAFG SG + +RE+AAFF QT HETTGG ++ WGYCF E+ A+S YYGRGPIQLT NY G ALG+D Sbjct: 26 GAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSP----------PYYGRGPIQLTGQSNYQAAGNALGLD 152
BLAST of CF835995 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 6.075e-29 Identity = 73/196 (37.24%), Postives = 100/196 (51.02%), Query Frame = 1 Query: 91 SAQNCGSPV---VCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC-DPNYPCRG--KYYGRGPIQLTWNCNYLRCGEALGVD 657 S CG+ V C CCS GWCG DYC CQ C+ V G G + +++ +F+ + +R D CP++ FY+Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C +D+C ++PC KY RGPIQLT N NY G+A+G D Sbjct: 68 SDHRCGAAVGNPPCGQDRCCSVHGWCGGGNDYCSGSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGED 260
BLAST of CF835995 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.036e-28 Identity = 67/131 (51.15%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 265 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNCNYLRCGEALGVD 657 +G I++ +F+ +L+ RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG +P G YA GYCF RE + YYGRGPIQLT NY G+A+ D Sbjct: 26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNG-----------YYGRGPIQLTGQSNYDLAGKAIEQD 144
BLAST of CF835995 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.768e-28 Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 265 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNCNYLRCGEALGVD 657 +G I++ +F ++L+ RND RCPA FYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG A + GYCF R+ +D D +YYGRGPIQLT NY + G A+ D Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNQNNYEKAGNAIRQD 143
BLAST of CF835995 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.309e-28 Identity = 65/129 (50.39%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 265 LGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNCNYLRCGEALG 651 +G I++ +F ++L+ RND RCPA FYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG A + GYCF R+ +D D +YYGRGPIQLT NY + G A+G Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNRNNYEKAGTAIG 141
BLAST of CF835995 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 6.717e-28 Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 1 Query: 91 SAQNCGSPVVCPGGECCSRFGWCGLTTDYCCEGCQSN-C----NQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR--GKYYGRGPIQLTWNCNYLRCGEALGVD 657 +AQNCG C G CCS++G+CG T YC +GCQS C + G G AG G + +++ F + + + C + FYT +F+ AA+++ F N KREIAAFFA HET C+ E+ A+ DYCD + +PC+ KYYGRGP+Q++WN NY G+ +G D Sbjct: 26 AAQNCG----CQDGYCCSQWGYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAG-AGAGVSVESVVTEAFFNGI-KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFD 205
BLAST of CF835995 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.146e-27 Identity = 80/205 (39.02%), Postives = 96/205 (46.83%), Query Frame = 1 Query: 94 AQNCGSPVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDD----------GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREV-GAASSDYCDPN----YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVD 657 AQNCG C CCS FG+CG T YC G NC C P GT G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ KREIAAFFA HETT C E G YCD + YPC KYYGRGP+QL+WN NY G+A+G D Sbjct: 27 AQNCG----CAPNLCCSNFGFCGTGTPYCGVG---NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFD 208 The following BLAST results are available for this feature:
BLAST of CF835995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835995 ID=CF835995; Name=CF835995; organism=Citrus sinensis; type=EST; length=658bpback to top |