CF835997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835997 vs. ExPASy Swiss-Prot
Match: ELV1A_XENLA (ELAV-like protein 1-A OS=Xenopus laevis GN=elavl1-A PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.252e-11 Identity = 44/134 (32.84%), Postives = 68/134 (50.75%), Query Frame = -2 Query: 47 TSLYVGDLDFNVTDSQLFDLLSLVGQVVSVRVCRD-----------LSTRRSLGYAYVNYGDPADAARALDVLNFTPLNNKSIRIT*CHGDPSIRETGSATILIENLDKSVHHKALRDTFSSFGSILSCEIATD 415 T+L V L N+T +L L S +G+V S ++ RD LS SLGY +VNY + DA RA++ LN L +K+I+++ PS A + I L +++ K + D F FG I++ + D Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGFEMRSSSLSKGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVS--FARPSSESIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVD 151
BLAST of CF835997 vs. ExPASy Swiss-Prot
Match: SAP49_SCHPO (Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe GN=sap49 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.547e-11 Identity = 40/129 (31.01%), Postives = 64/129 (49.61%), Query Frame = -2 Query: 29 SLYVGDLDFNVTDSQLFDLLSLVGQVVSVRVCRDLSTRRSLGYAYVNYGDPADAARALDVLNFTPLNNKSIRIT*CHGDPSIRETGSATILIENLDKSVHHKALRDTFSSFGSILSC-EIATDGSRESQ 412 ++Y+G+LD VTDS LF+L G VV++ + RD G+ + + D A +LN L K IR+ D + A + + NLD V + L DTFS+ G ++ ++A D + S+ Sbjct: 12 TIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKPIRVNRASQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSK 140
BLAST of CF835997 vs. ExPASy Swiss-Prot
Match: SXL_DROME (Protein sex-lethal OS=Drosophila melanogaster GN=Sxl PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.462e-11 Identity = 44/146 (30.14%), Postives = 73/146 (50.00%), Query Frame = -2 Query: 47 LQGQISGRNGEAAGASGNRLLATSLYVGDLDFNVTDSQLFDLLSLVGQVVSVRVCRDLSTRRSLGYAYVNYGDPADAARALDVLNFTPLNNKSIRIT*CH-GDPSIRETGSATILIENLDKSVHHKALRDTFSSFGSILSCEIATD 481 L G G G + R T+L V L ++TD +L+ L +G + + R+ RD T S GYA+V++ D+ RA+ VLN + NK ++++ G SI++T + + NL +++ L F +GSI+ I D Sbjct: 103 LCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDT---NLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRD 245 The following BLAST results are available for this feature:
BLAST of CF835997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835997 ID=CF835997; Name=CF835997; organism=Citrus sinensis; type=EST; length=749bpback to top |