CF836003
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836003 vs. ExPASy Swiss-Prot
Match: DBP8_PICST (ATP-dependent RNA helicase DBP8 OS=Pichia stipitis GN=DBP8 PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.164e-29 Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 3 Query: 297 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIP*ILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGALALVITPTRELAYQLAEQFKALGSGLHLRCEAVAGGMDLLTPAKSLMNRPHVVIATPGMM 680 F LG++ W + + + PT +Q+ CIP IL G D +G A+TGSGKT AFA P+L + +EDP+G LV+TPTRELA Q+AEQF ALG+ ++++ V GG D + L +PH VIATPG + Sbjct: 3 FEDLGVSRWLSEALAAMKIHTPTAIQSGCIPKILSGHDCIGGAKTGSGKTIAFAAPMLTQWSEDPFGIFGLVLTPTRELALQIAEQFAALGASMNIKISVVVGGEDFVKQTLELQKKPHFVIATPGRL 130
BLAST of CF836003 vs. ExPASy Swiss-Prot
Match: DBP8_EMENI (ATP-dependent RNA helicase dbp8 OS=Emericella nidulans GN=dbp8 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.164e-29 Identity = 60/128 (46.88%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 297 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIP*ILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGALALVITPTRELAYQLAEQFKALGSGLHLRCEAVAGGMDLLTPAKSLMNRPHVVIATPGMM 680 F L +A W V + + +R+PT +Q CIP IL+G+D +G ++TGSGKT AF++PIL + AEDP+G A+++TPTRELA Q+ EQ KA+ + ++ + GG D+ + A L RPHVV+ATPG + Sbjct: 97 FKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVPILQKWAEDPFGIFAVILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRSQAIELAGRPHVVVATPGRL 224
BLAST of CF836003 vs. ExPASy Swiss-Prot
Match: DBP8_ASPNC (ATP-dependent RNA helicase dbp8 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp8 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.164e-29 Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 297 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIP*ILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGALALVITPTRELAYQLAEQFKALGSGLHLRCEAVAGGMDLLTPAKSLMNRPHVVIATPGMM 680 FA L +A W + + + +R+PT +Q CIP IL G+D +G ++TGSGKT AF++P+L + AEDP+G LV+TPTRELA Q+ EQ KA+ + ++ + GG D+ A +L RPHVVIATPG + Sbjct: 94 FASLNVAPWLIGSLTTMAVRKPTAIQKACIPEILNGRDCIGGSRTGSGKTIAFSVPMLQKWAEDPFGIFGLVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRPQAVALAQRPHVVIATPGRL 221
BLAST of CF836003 vs. ExPASy Swiss-Prot
Match: DBP8_ASPCL (ATP-dependent RNA helicase dbp8 OS=Aspergillus clavatus GN=dbp8 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.164e-29 Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 297 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIP*ILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGALALVITPTRELAYQLAEQFKALGSGLHLRCEAVAGGMDLLTPAKSLMNRPHVVIATPGMM 680 F+ L +A W V + L +R+PT +Q CIP IL GKD +G ++TGSGKT AF++P+L + AEDP G L++TPTRELA Q+ EQ KA+ + ++ + GG D+ + A +L RPHVV+ATPG + Sbjct: 95 FSALNVAPWLVGSLTTLAVRKPTAIQKACIPEILNGKDCIGGSRTGSGKTIAFSVPMLQKWAEDPLGIFGLILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRSQALALAGRPHVVVATPGRL 222
BLAST of CF836003 vs. ExPASy Swiss-Prot
Match: DBP8_NEOFI (ATP-dependent RNA helicase dbp8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp8 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.133e-29 Identity = 61/128 (47.66%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 297 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIP*ILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGALALVITPTRELAYQLAEQFKALGSGLHLRCEAVAGGMDLLTPAKSLMNRPHVVIATPGMM 680 FA L +A W V + + +R+PT +Q CIP IL+G+D +G ++TGSGKT AF++P+L + AEDP+G +V+TPTRELA Q+ EQ KA+ + ++ + GG D+ A +L RPHVVIATPG + Sbjct: 98 FAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFSVPMLQKWAEDPFGIFGVVLTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRPQAIALAGRPHVVIATPGRL 225
BLAST of CF836003 vs. ExPASy Swiss-Prot
Match: DBP8_ASPFU (ATP-dependent RNA helicase dbp8 OS=Aspergillus fumigatus GN=dbp8 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.133e-29 Identity = 61/128 (47.66%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 297 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIP*ILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGALALVITPTRELAYQLAEQFKALGSGLHLRCEAVAGGMDLLTPAKSLMNRPHVVIATPGMM 680 FA L +A W V + + +R+PT +Q CIP IL+G+D +G ++TGSGKT AF++P+L + AEDP+G +V+TPTRELA Q+ EQ KA+ + ++ + GG D+ A +L RPHVVIATPG + Sbjct: 98 FAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFSVPMLQKWAEDPFGIFGVVLTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRPQAIALAGRPHVVIATPGRL 225
BLAST of CF836003 vs. ExPASy Swiss-Prot
Match: DDX47_DICDI (Probable ATP-dependent RNA helicase ddx47 OS=Dictyostelium discoideum GN=ddx47 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 57/126 (45.24%), Postives = 85/126 (67.46%), Query Frame = 3 Query: 297 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIP*ILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGALALVITPTRELAYQLAEQFKALGSGLHLRCEAVAGGMDLLTPAKSLMNRPHVVIATPG 674 F LG+ + C +LG +P +Q IP L+G+D++GLAQTGSGKTAAF +P+L +L E P G L + PTRELAYQ+A+QF A+GS + ++ + GG+D ++ + +L +PHVV+ +PG Sbjct: 121 FESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQKLLEAPQGLFCLALAPTRELAYQIADQFNAIGSTIGVKTCVLVGGIDSMSQSLALAKKPHVVVGSPG 246
BLAST of CF836003 vs. ExPASy Swiss-Prot
Match: DBP8_ASPOR (ATP-dependent RNA helicase dbp8 OS=Aspergillus oryzae GN=dbp8 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28 Identity = 60/125 (48.00%), Postives = 88/125 (70.40%), Query Frame = 3 Query: 306 LGLAEWAVQTCKELGMRRPTPVQTHCIP*ILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGALALVITPTRELAYQLAEQFKALGSGLHLRCEAVAGGMDLLTPAKSLMNRPHVVIATPGMM 680 L ++ W V + + +R+PT +Q CIP IL+G+D +G ++TGSGKT AFA+PIL + A+DP+G A+V+TPTRELA Q+ EQ KA+ + ++ + GG D+ + A +L RPHVVIATPG + Sbjct: 18 LNVSPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFAVPILQKWAQDPFGIFAVVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRSQALALSQRPHVVIATPGRL 142
BLAST of CF836003 vs. ExPASy Swiss-Prot
Match: DBP8_PHANO (ATP-dependent RNA helicase DBP8 OS=Phaeosphaeria nodorum GN=DBP8 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.499e-28 Identity = 62/128 (48.44%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 297 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIP*ILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGALALVITPTRELAYQLAEQFKALGSGLHLRCEAVAGGMDLLTPAKSLMNRPHVVIATPGMM 680 FA + +A W V + + ++RPT +Q CIP IL+G+D +G ++TG+GKT AF++PIL + AEDP G L+ITPTRELA Q+ EQ KA+ + ++ V GG D A +L +RPHVVIATPG + Sbjct: 79 FASIDVAPWLVASLASMEIKRPTGIQKACIPEILKGRDCIGGSRTGTGKTVAFSVPILQKWAEDPSGIFGLIITPTRELAIQIYEQVKAISAPQSMKPILVTGGSDQREQAIALASRPHVVIATPGRL 206
BLAST of CF836003 vs. ExPASy Swiss-Prot
Match: RRP3_LODEL (ATP-dependent rRNA helicase RRP3 OS=Lodderomyces elongisporus GN=RRP3 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 297 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIP*ILEGKDVLGLAQTGSGKTAAFALPILHRL--AEDPYGALALVITPTRELAYQLAEQFKALGSGLHLRCEAVAGGMDLLTPAKSLMNRPHVVIATPGMM 680 F L +++ + L +PTP+Q IP L+GKD++G+A+TGSGKTAAFA+PIL L A PY ALV+ PTRELA+Q+ E F ALGS + LR + GGM ++ A+ LM +PHV+IATPG + Sbjct: 100 FTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPY--YALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRL 227 The following BLAST results are available for this feature:
BLAST of CF836003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836003 ID=CF836003; Name=CF836003; organism=Citrus sinensis; type=EST; length=712bpback to top |