CF836004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS15B_DROME (40S ribosomal protein S15Ab OS=Drosophila melanogaster GN=RpS15Ab PE=2 SV=3) HSP 1 Score: 177.563 bits (449), Expect = 2.662e-44 Identity = 83/115 (72.17%), Postives = 95/115 (82.61%), Query Frame = -3 Query: 133 NAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 477 NAEKRGKRQV++ P SKVIIKFL M KHGYIGE E V+DHRAGKIVV L GR+NKCGVISPRFD + +I WT LLPSRQ+GY+VLTT GIM HEEARRK++GGK+ GFF+ Sbjct: 16 NAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEFEIVEDHRAGKIVVNLTGRLNKCGVISPRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILGFFF 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS15A_PONAB (40S ribosomal protein S15a OS=Pongo abelii GN=RPS15A PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 3.477e-44 Identity = 83/118 (70.34%), Postives = 97/118 (82.20%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 S+ NAEKRGKRQV+I P SKVI++FL M KHGYIGE E +DDHRAGKIVV L GR+NKCGVISPRFDV +K++ W L PSRQ+G+IVLTT AGIM HEEARRK+ GGK+ GFF+ Sbjct: 13 SINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLFPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS15A_PARLI (40S ribosomal protein S15a OS=Paracentrotus lividus GN=RPS15A PE=2 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 5.931e-44 Identity = 83/115 (72.17%), Postives = 95/115 (82.61%), Query Frame = -3 Query: 133 NAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 477 NAEKR KRQV+I P SKV IKFL+ M KHGYIGE E VDDHR GKI+V LNGR+NKCGVISPRFDV + ++ WT LLPSRQ+GY+VLTT GIM HEEARRK+VGGK+ GFF+ Sbjct: 16 NAEKRCKRQVLIRPCSKVTIKFLMVMIKHGYIGEFEVVDDHRGGKIIVNLNGRLNKCGVISPRFDVPINDMEKWTSNLLPSRQFGYVVLTTSGGIMDHEEARRKHVGGKILGFFF 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS15A_ICTPU (40S ribosomal protein S15a OS=Ictalurus punctatus GN=rps15a PE=2 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 3.845e-43 Identity = 82/115 (71.30%), Postives = 94/115 (81.74%), Query Frame = -3 Query: 133 NAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 477 NAEKRGK QV+I P SKVI++FL M KHGYIGE E +DDHRAGKIVV L GR+NKCGVISPRFDV +K++ W LLPSRQ+G+IVLTT AGIM HEEARRK+ GGK GFF+ Sbjct: 16 NAEKRGKAQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKSLGFFF 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS22_SCHPO (40S ribosomal protein S22 OS=Schizosaccharomyces pombe GN=rps22a PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 5.552e-42 Identity = 79/118 (66.95%), Postives = 96/118 (81.36%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 ++ NAE+RG+RQV+I PSSKVI+KFL MQKHGYI E +DDHR+GKIV++LNGR+NKCGVISPRF+V +K+I W +LLPSRQ G IVLTT GIM H EAR K+ GGK+ GFFY Sbjct: 13 NIVNAERRGRRQVLIRPSSKVIVKFLTVMQKHGYIDEFTEIDDHRSGKIVIQLNGRINKCGVISPRFNVKLKDIEKWVNQLLPSRQVGVIVLTTSRGIMSHNEARAKDAGGKILGFFY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS15A_DICDI (40S ribosomal protein S15a OS=Dictyostelium discoideum GN=rps15a PE=2 SV=3) HSP 1 Score: 163.696 bits (413), Expect = 3.979e-40 Identity = 78/118 (66.10%), Postives = 94/118 (79.66%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 S+ NAE++GKRQV++ PSSKVI+KFL M K YIGE E VDDHR+GKIV++L GR+NKCGVISPRFDV + EI W LLPSRQ+G+IVLTT GIM H EA+ ++ GGKL GFFY Sbjct: 13 SIVNAERQGKRQVLVRPSSKVIVKFLEVMMKKRYIGEFEIVDDHRSGKIVIDLIGRINKCGVISPRFDVTLDEIEKWASYLLPSRQFGHIVLTTSLGIMDHNEAKTRHTGGKLLGFFY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS22_AGABI (40S ribosomal protein S22 OS=Agaricus bisporus GN=rps22 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 6.786e-40 Identity = 78/118 (66.10%), Postives = 93/118 (78.81%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 S+ NA +RGKRQV++ PSSKV++KFL MQ+HGYIGE E +DDHR GKI+V+LNGR+NK GVISPRF+V I W LLPSR G IVLTT +GI+ HEEARRKNVGGKL G+ Y Sbjct: 13 SICNASRRGKRQVIVRPSSKVVVKFLSVMQRHGYIGEFEIIDDHRGGKIIVQLNGRLNKTGVISPRFNVQHNRIEQWINYLLPSRGIGIIVLTTSSGILDHEEARRKNVGGKLLGYVY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS8_CALMQ (30S ribosomal protein S8P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps8p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 7.783e-28 Identity = 62/118 (52.54%), Postives = 78/118 (66.10%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 S+ NAE RG RQV+I PSSK+I L MQ++GY+GE EYV D R GK VV+L GR+N G I PRF V V E+ W + LP+RQ G ++LTT G++ H EAR VGG L + Y Sbjct: 13 SVKNAESRGDRQVIIWPSSKLIGNVLRVMQRYGYVGEFEYVYDGRGGKYVVQLLGRINDIGAIKPRFHVKVDELQKWEEKYLPARQVGILILTTSKGVVSHLEARENRVGGILVAYVY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS8_METS5 (30S ribosomal protein S8P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps8p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.016e-27 Identity = 57/121 (47.11%), Postives = 84/121 (69.42%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVG---WTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 S+YN E R +Q +I PSSK+I+ L MQK GY+GE EY+DD R GKI+V+L GR+NKCG I+PR+ + +E++ + R LPS++ G I+++T G+M H+EA R+ GG + G+ Y Sbjct: 13 SLYNNEMRRNKQAIIMPSSKLIVNVLRVMQKEGYVGEFEYIDDGRWGKILVQLMGRINKCGAITPRYSLTYREMISLPDYIRRYLPSKEIGVIIVSTPKGVMTHKEAARQRTGGIVLGYVY 133
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: R15A5_ARATH (40S ribosomal protein S15a-5 OS=Arabidopsis thaliana GN=RPS15AE PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.734e-27 Identity = 59/118 (50.00%), Postives = 81/118 (68.64%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 ++ NAE+RGK V + P S V+ FL M++ GYI + D HR G+I V+L GRVN C ++ R DV KEI +T R LP+RQ+GY+V+TT GI+ HEEA ++NVGG++ GFFY Sbjct: 12 TIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129 The following BLAST results are available for this feature:
BLAST of CF836004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836004 ID=CF836004; Name=CF836004; organism=Citrus sinensis; type=EST; length=488bpback to top |