CF836005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_THEON (30S ribosomal protein S8P OS=Thermococcus onnurineus (strain NA1) GN=rps8p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.696e-12 Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 M ++ L +AL + N+E+ GK++V I P+SK+I + L VMQ++GYIGEFE++DD RAG V+L G++N G Sbjct: 1 MTLLDPLANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLIGKINKAG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_THEGJ (30S ribosomal protein S8P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps8p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.696e-12 Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 M ++ L +AL + N+E+ GK++V I P+SK+I + L VMQ++GYIGEFE++DD RAG V+L G++N G Sbjct: 1 MTLLDPLANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLIGKINKAG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_THESM (30S ribosomal protein S8P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps8p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.746e-12 Identity = 36/73 (49.32%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 M ++ L +AL + N+EK GK +V I P+SK+I + L VMQ++GYIGEFE++DD RAG V+L G++N G Sbjct: 1 MTLLDPLANALSHITNSEKVGKSEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLLGKVNKAG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_PYRAE (30S ribosomal protein S8P OS=Pyrobaculum aerophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11 Identity = 32/73 (43.84%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV++ +L++AL + NAE GK+Q +I P +K+ L V+Q++GY+GE EY+DD + GK +V+L G++N G Sbjct: 1 MVMLDILSNALIQIKNAEIVGKKQAVIWPVNKLTYYTLRVLQRYGYVGEIEYIDDGKGGKYIVQLLGKINDIG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_METBU (30S ribosomal protein S8P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps8p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11 Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV++ L DAL + NAE GK I P+SK+I L VM GYIG+FE+V+D +AG VEL GR+N CG Sbjct: 1 MVLLDPLADALSIIKNAEAVGKDSCTIRPASKLIGNVLKVMNDRGYIGDFEFVEDGKAGVYTVELIGRINKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_ARCFU (30S ribosomal protein S8P OS=Archaeoglobus fulgidus GN=rps8p PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.492e-11 Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 3 Query: 72 VSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 V L++A+ ++ NAE G+++ I P+SK+I L VM+ +GYI FEYV++HR GK +VEL+G +N CG Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCG 72
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_METTP (30S ribosomal protein S8P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps8p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.948e-11 Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 3 Query: 66 VIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 +++ L DA+ ++ NAE GK + +I P+SK+I L VM GYIGEFE++DD ++G V+L GR+N CGV Sbjct: 1 MLLDPLADAMSTIKNAENVGKPECIIKPASKLIAMTLKVMADLGYIGEFEFIDDGKSGMFKVKLLGRINRCGV 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_METTL (30S ribosomal protein S8P OS=Methanococcus thermolithotrophicus GN=rps8p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.341e-11 Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 M ++ L +AL + N E GK + P+SK+I + L VMQ HGYIG FEY++D RAG VEL G++N CG Sbjct: 1 MSLMDPLANALNHISNCEGVGKSVAYVKPASKLIGRVLNVMQDHGYIGNFEYIEDGRAGIYKVELIGQINKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_METBF (30S ribosomal protein S8P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps8p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.341e-11 Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV++ L +AL ++ NAE GK +I P+SK I L VMQ GYIGEFE++DD +AG V L GR+N CG Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIIRPASKNIGNVLKVMQDLGYIGEFEFIDDGKAGIYSVTLVGRVNKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_THEAC (30S ribosomal protein S8P OS=Thermoplasma acidophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.670e-11 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 81 LNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 LND + S+ NA + GKR+++ P++K+I K L VMQ + YI FE +D+ R GK + LN +N CGV Sbjct: 6 LNDVINSIKNASRLGKREIIAEPAAKLIGKVLKVMQDYNYIKSFEVIDESRGGKFKIVLNTTINNCGV 73 The following BLAST results are available for this feature:
BLAST of CF836005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836005 ID=CF836005; Name=CF836005; organism=Citrus sinensis; type=EST; length=284bpback to top |