CF836007
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836007 vs. ExPASy Swiss-Prot
Match: RL27_CAEEL (60S ribosomal protein L27 OS=Caenorhabditis elegans GN=rpl-27 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.651e-34 Identity = 68/136 (50.00%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 57 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 461 M K +KP K V++L+G+YAGRKAV+VK D+G +R Y H ++AGI +YP KV + KK K++++K F+K+V+Y HL+PTRY++DV K ++ ++L++ KK A E K + EER+KTGKN+WFFTKLRF Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136
BLAST of CF836007 vs. ExPASy Swiss-Prot
Match: RL27A_SCHPO (60S ribosomal protein L27-A OS=Schizosaccharomyces pombe GN=rpl27a PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.651e-34 Identity = 65/136 (47.79%), Postives = 100/136 (73.53%), Query Frame = 3 Query: 57 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 461 MVK LKP K ++ +GR+AG+K VI+++ D G++ +GH +VAG+++YP KV + AK+ A++SRVK F+K+VNY HLMPTRY L++D LK +++AD+ + ++ A K KK EE++++GK+ WFFT LRF Sbjct: 1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEEKYQSGKSAWFFTPLRF 136
BLAST of CF836007 vs. ExPASy Swiss-Prot
Match: RL27_CANAL (60S ribosomal protein L27 OS=Candida albicans GN=RPL27 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.803e-34 Identity = 69/136 (50.74%), Postives = 96/136 (70.59%), Query Frame = 3 Query: 57 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 461 M KF+K K I+++GRYAG+K VIVK D+GT+ + H +VAGI++ P KV +K AKK K+++VK FVKLVNY HLMPTRY+LDV+ K V++++L+ ++ A K KK EE+ + GKN+WFF KL F Sbjct: 1 MAKFIKSGKVAIVVRGRYAGKKVVIVKPHDEGTKSHPFPHAIVAGIERAPLKVTKKMDAKKVTKRTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKKAFEEKHQAGKNKWFFQKLHF 136
BLAST of CF836007 vs. ExPASy Swiss-Prot
Match: RL27B_SCHPO (60S ribosomal protein L27-B OS=Schizosaccharomyces pombe GN=rpl27b PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.066e-33 Identity = 64/136 (47.06%), Postives = 96/136 (70.59%), Query Frame = 3 Query: 57 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 461 MVK LKP K ++ +GR+AG+K VI+++ D G++ +GH +VAG+++YP KV + AK+ AK+SRVK F+K++NY HLMPTRY L++D LK +V+ + ++ A K K EE+++TGK+ WFFT LRF Sbjct: 1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEEKYQTGKSAWFFTPLRF 136
BLAST of CF836007 vs. ExPASy Swiss-Prot
Match: RL27_DICDI (60S ribosomal protein L27 OS=Dictyostelium discoideum GN=rpl27 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.871e-32 Identity = 69/142 (48.59%), Postives = 94/142 (66.20%), Query Frame = 3 Query: 63 KFLKPNKAVILLQGRYAGRKAVIVKSFDDGT--RERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLD-------VDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 461 KF+KP + VILL G+YAGRKAV++K+FDD T + R YGHCLVAGI KYP ++R S K K++ +++FVK+VNY H+MPTRY + LK+ V+ +S Q K+ KK E + K GK++WFF+KLRF Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVA-KRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144 The following BLAST results are available for this feature:
BLAST of CF836007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836007 ID=CF836007; Name=CF836007; organism=Citrus sinensis; type=EST; length=660bpback to top |