CF836016

Overview
NameCF836016
Unique NameCF836016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1144 contig Csv1_Contig1144:1011..1791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = -1
Query:  481 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 780
            GC+  E+L  +PLF G+  +DQ+  I +VLGTP       +   P Y    FP     P++K+F  R  P A+DL+ +  QY P+ R +A EA +HP+F +L
Sbjct:  192 GCIFGEMLNKKPLFSGDCEIDQIFRIFRVLGTPDDSIWPGVTKLPEYVS-TFPNWPGQPYNKIF-PRCEPLALDLIAKMLQYEPSKRISAKEALLHPYFGDL 291          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: ERKA_DROME (Mitogen-activated protein kinase ERK-A OS=Drosophila melanogaster GN=rl PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.146e-12
Identity = 40/108 (37.04%), Postives = 66/108 (61.11%), Query Frame = -1
Query:  472 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPH-PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 780
            GC++AE+L  +P+FPG+  +DQL  I+ VLG+P+R++++C+      NY E   P  KP+ PW K+F       A+DL+ +   ++P+ R    EA  HP+ ++  DP
Sbjct:  278 GCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLE-SLP-FKPNVPWAKLF-PNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDP 382          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: MK13_MOUSE (Mitogen-activated protein kinase 13 OS=Mus musculus GN=Mapk13 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = -1
Query:  445 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 780
            GC+MAE+L G+ LF G+  +DQL +I+KV G P  E ++ +     +  + Q  P    K F +  P   P+A DL+ +  +   + R TA +A  HPFF+  RDP       +P
Sbjct:  210 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGAEFVQKLKDKAAK-SYIQSLPQSPKKDFTQLFPRASPQAADLLDKMLELDVDKRLTAAQALAHPFFEPFRDPEEETEAQQP 323          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAKH (Cell division control protein 2 homolog OS=Plasmodium knowlesi (strain H) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.366e-12
Identity = 40/101 (39.60%), Postives = 56/101 (55.45%), Query Frame = -1
Query:  484 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 780
            GC+ AE++ G+PLFPG S  DQL+ I ++LGTP       +   P Y +  F   +P PW + F K L    +DL+ +  +  PN R TA EA  H +F E
Sbjct:  188 GCIFAEMVNGRPLFPGVSETDQLMRIFRILGTPNSANWPSVTELPKY-DPDFIVYEPLPW-ETFLKGLDDTGIDLLSKMLRLDPNQRITAKEALQHAYFKE 286          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.366e-12
Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = -1
Query:  487 CVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 777
            C+MAE++L +P FPG+S +DQL  I KVLGTP       +   PNY + +FP   P     +F  R  P+ VDL+ +  +Y P +R TA     H +F+
Sbjct:  194 CIMAEVVLMRPFFPGDSEIDQLFRIFKVLGTPNNSRWSNVENFPNY-KVEFPVWDPVDLKTIF--RGDPDFVDLISKMLEYDPKMRMTAKNGLSHKYFE 289          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: MCK1_YEAST (Protein kinase MCK1 OS=Saccharomyces cerevisiae GN=MCK1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.009e-12
Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = -1
Query:  409 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY-----TEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNG----RPLPPLFNFKPPEL 780
            GCVM E+L+G+ +F G+  + QL EI K+LG P +  I   NP Y     ++  F       + K F     P+ +DL+ +   Y P  R +      H FF+ELR+ +T LP G      LP LF+F   EL
Sbjct:  227 GCVMGEMLIGKAIFQGQEPLLQLREIAKLLGPPDKRFIFFSNPAYDGPLFSKPLFSGSSQQRFEKYF-GHSGPDGIDLLMKILVYEPQQRLSPRRILAHQFFNELRNDDTFLPRGFTEPIKLPNLFDFNDFEL 358          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: HOG1_ZYGRC (Mitogen-activated protein kinase HOG1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=HOG1 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.009e-12
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = -1
Query:  472 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKR---LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 780
            GC+ +E++ G+PLFPG+  V Q   I  +LG+P R+ I  +    T  KF    PH     FQ+R   + P+AVDL+ R   + P  R TA +A VHP+     DP
Sbjct:  204 GCIFSEMIEGKPLFPGKDHVHQFSIITDLLGSPPRDVINTICSENT-LKFVTSLPHRDPVPFQERFKTVEPDAVDLLERMLVFDPKKRITAADALVHPYLAPYHDP 308          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: CDK7_HUMAN (Cell division protein kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.009e-12
Identity = 46/123 (37.40%), Postives = 62/123 (50.41%), Query Frame = -1
Query:  421 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE--IKCMNPNYTEFK-FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK 780
            GC++AELLL  P  PG+S +DQL  I + LGTPT E+    C  P+Y  FK FP I   P H +F      + +DL+   F ++P  R TA +A    +F     P       RP  P+   K
Sbjct:  200 GCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI---PLHHIF-SAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLK 318          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: HOG2_ZYGRO (Mitogen-activated protein kinase HOG2 OS=Zygosaccharomyces rouxii GN=HOG2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.154e-12
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = -1
Query:  472 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKR---LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 780
            GC+ +E++ G+PLFPG+  V Q   I  +LG+P R+ I  +    T  KF    PH     FQ+R   + P+AVDL+ R   + P  R TA +A VHP+     DP
Sbjct:  204 GCIFSEMIEGKPLFPGKDHVHQFSIITDLLGSPPRDVINTICSENT-LKFVTSLPHRDPVPFQERFKTVEPDAVDLLRRMLVFVPKKRITAADALVHPYLAPYHDP 308          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: MAPK_FUSSO (Mitogen-activated protein kinase OS=Fusarium solani subsp. pisi GN=MAPK PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.561e-11
Identity = 47/139 (33.81%), Postives = 67/139 (48.20%), Query Frame = -1
Query:  373 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE---IKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLI 780
            GC++AE+L G+PLFPG+    QL  I+ VLGTPT E+   IK           P  K  P+  +F K     A+DL+ +   ++P  R T  EA  HP+ +   DP    P   P+P  F         +  E + +LI
Sbjct:  213 GCILAEMLSGKPLFPGKDYHHQLTLILDVLGTPTMEDYYGIKSRRAREYIRSLPFKKKVPFRTLFPK-TSDLALDLLEKLLAFNPVKRITVEEALKHPYLEPYHDPEDE-PTAPPIPEEFFDFDKHKDNLSKEQLKQLI 349          
The following BLAST results are available for this feature:
BLAST of CF836016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
CDC2_DICDI2.409e-1238.24Cell division control protein 2 homolog OS=Dictyos... [more]
ERKA_DROME3.146e-1237.04Mitogen-activated protein kinase ERK-A OS=Drosophi... [more]
MK13_MOUSE4.109e-1234.78Mitogen-activated protein kinase 13 OS=Mus musculu... [more]
CDC2H_PLAKH5.366e-1239.60Cell division control protein 2 homolog OS=Plasmod... [more]
CDC28_ENCCU5.366e-1239.39Probable cell division control protein 28 homolog ... [more]
MCK1_YEAST7.009e-1235.34Protein kinase MCK1 OS=Saccharomyces cerevisiae GN... [more]
HOG1_ZYGRC7.009e-1238.68Mitogen-activated protein kinase HOG1 OS=Zygosacch... [more]
CDK7_HUMAN7.009e-1237.40Cell division protein kinase 7 OS=Homo sapiens GN=... [more]
HOG2_ZYGRO9.154e-1238.68Mitogen-activated protein kinase HOG2 OS=Zygosacch... [more]
MAPK_FUSSO1.561e-1133.81Mitogen-activated protein kinase OS=Fusarium solan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E13_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836016 ID=CF836016; Name=CF836016; organism=Citrus sinensis; type=EST; length=780bp
TTTTTTTTTTTTTTTTTAATATTTTACAGATTCTCATATTTTTCATCTCA
CTAAACTCGCCCATGAAACAGGGATACAACAAATTACATGATAAGTTAAA
AAAAAAAAAAAAATTGTCTTCATCCAAAGCCGTAACTCGTAATGACAAAT
AAACAAACTCAAAGCCTCAGTCAGGTCTCCCAAATTCTCCTAAACATTCC
TTCTGCAACACTCTTTCCTCACCGGAACTAAAGAGACAATGATAAATGAA
AAAACGGTGACGGATTTTTACAAGTGTCGATAAAACGTTCAAGATAAACT
TACGGAGGAGACTTGTAACAGATGCTAAGAGTGCAAAGCCATGAATAAGT
TCTGCTTACGAGCGTGCTCTGGGATGAGTCTGTTGATGGTTTCAGGTGGG
ATGCCCGAAAGCTCTGGAGGTTTAAAATTAAACAGGGGTGGAAGGGGGCG
ACCATTAGGAAGGCGGGTGTTTGGGTCCCTTAATTCATCAAAGAAAGGGT
GAACACAAGCTTCCAGAGCAGTGCATCGTAAGTTGGGAGAGTACTGGAAA
AATCTACAGACGAGGTCCACAGCTTCTGGGGGTAAACGCTTTTGGAAGAC
CTTGTGCCACGGATGAGGCTTTATCTGTGGGAACTTAAATTCTGTATAGT
TTGGATTCATGCACTTTATCTCCTCTCGGGTTGGTGTTCCCAAAACCTTG
ATAATCTCAACTAGTTGGTCAACTCCACTTTCACCAGGAAACAAAGGCTG
TCCAAGAAGCAACTCAGCCATCACACAACC
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