CF836016

Overview
NameCF836016
Unique NameCF836016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1144 contig Csv1_Contig1144:1011..1791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: HOG1_DEBHA (Mitogen-activated protein kinase HOG1 OS=Debaryomyces hansenii GN=HOG1 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 37/109 (33.94%), Postives = 63/109 (57.80%), Query Frame = -1
Query:  472 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH----PWHKVFQK--RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 780
            GC+++E++ G+PLFPG+  V Q   I ++LG+P  + I+ +    T  +F Q  PH    P+ + F +   + PEA+DL+ +   + P  R +AL+A  HP+ +   DP
Sbjct:  204 GCILSEMIEGKPLFPGKDHVHQFSIITELLGSPPPDVIETICSENT-LRFVQSLPHRDPIPFSERFAQCSHVEPEAIDLLAKMLIFDPKKRISALDALSHPYMEPYHDP 311          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: HOG1_CANAL (Mitogen-activated protein kinase HOG1 OS=Candida albicans GN=HOG1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 37/109 (33.94%), Postives = 60/109 (55.05%), Query Frame = -1
Query:  472 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH----PWHKVFQK--RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 780
            GC++AE++ G+PLFPG+  V Q   I ++LG+P  + I  +    T  +F Q  PH    P+ + F     + PEA+DL+ +   + P  R +A+E   HP+ +   DP
Sbjct:  204 GCILAEMIEGKPLFPGKDHVHQFSIITELLGSPPADVIDTICSENT-LRFVQSLPHRDPIPFSERFASCTHVEPEAIDLLAKLLVFDPKKRISAVEGLTHPYMEAYHDP 311          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: CDK17_RAT (Cell division protein kinase 17 OS=Rattus norvegicus GN=Cdk17 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 43/130 (33.08%), Postives = 65/130 (50.00%), Query Frame = -1
Query:  397 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN--YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIP 780
            GC+  E+  G+PLFPG +  D+L  I ++LGTP++E    ++ N  +  + FP+ KP P       RL  E ++L+ +F QY    R  A EA  H +F  L      LP       +F+ K  +L   P
Sbjct:  376 GCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGVSSNDEFKNYNFPKYKPQPLIN-HAPRLDSEGIELITKFLQYESKKRAPAEEAMKHVYFRSLGPRIHALPES---VSIFSLKEIQLQKDP 501          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: MK14A_DANRE (Mitogen-activated protein kinase 14A OS=Danio rerio GN=mapk14a PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11
Identity = 44/139 (31.65%), Postives = 67/139 (48.20%), Query Frame = -1
Query:  373 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE---FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLI 780
            GC+MAELL G+ LFPG   ++QL +I+++ GTP    I  M  +         PQ+    +  VF     P+AVDL+ +      + R TA EA  HP+F +  DP+   P   P    F  +  ++     +T   +I
Sbjct:  211 GCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPSSLISRMPSHEARTYISSLPQMPKRNFADVF-IGANPQAVDLLEKMLVLDTDKRITAAEALAHPYFAQYHDPDDE-PEAEPFDQSFESRELDIEEWKRQTYEEMI 347          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: MK12_MOUSE (Mitogen-activated protein kinase 12 OS=Mus musculus GN=Mapk12 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11
Identity = 40/106 (37.74%), Postives = 59/106 (55.66%), Query Frame = -1
Query:  475 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN----PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD 780
            GC+MAE++ G+ LF G   +DQL EI+K+ GTP  E ++ +      NY E   P+++   +  V      P+AV+L+ R        R TA EA  HP+F+ LRD
Sbjct:  213 GCIMAEMITGKILFKGNDHLDQLKEIMKITGTPPPEFVQKLQSAEAKNYME-GLPELEKKDFASVL-TNASPQAVNLLERMLVLDAEQRVTAAEALTHPYFESLRD 316          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: MAPK2_PNECA (Mitogen-activated protein kinase 2 OS=Pneumocystis carinii GN=MKP2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11
Identity = 44/120 (36.67%), Postives = 63/120 (52.50%), Query Frame = -1
Query:  430 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE---IKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLF 780
            GC++AE+L G+PLFPG+    QL+ I+ VLGTPT E+   IK           P  K   +  +F  R  P A+DL+ +   ++P  R TA EA  H + +   DP+   P   P+ P F
Sbjct:  206 GCILAEMLSGRPLFPGKDYHHQLMLILDVLGTPTMEDYYGIKSRRAREYIRSLPFKKRVSFASIF-PRANPLALDLLEKLLAFNPAKRVTAEEALQHNYLEPYHDPDDE-PTAPPISPSF 323          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11
Identity = 43/130 (33.08%), Postives = 65/130 (50.00%), Query Frame = -1
Query:  397 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN--YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIP 780
            GC+  E+  G+PLFPG +  D+L  I ++LGTP++E    ++ N  +  + FP+ KP P       RL  E ++L+ +F QY    R  A EA  H +F  L      LP       +F+ K  +L   P
Sbjct:  376 GCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGVSSNDEFKNYNFPKYKPQPLIN-HAPRLDSEGIELITKFLQYESKKRVPAEEAMKHVYFRSLGPRIHALPES---VSIFSLKEIQLQKDP 501          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.543e-11
Identity = 41/112 (36.61%), Postives = 60/112 (53.57%), Query Frame = -1
Query:  490 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYT------EFK-------FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 780
            GC+ AE+ +G PLF G++  DQL+ I + LGTP+ +    MN  PN T      EF+         Q + HP +     +L P+ +DL+ R  +Y P  R TA +A  HP+F
Sbjct:  190 GCIFAEMAIGAPLFAGKNDADQLLRIFRFLGTPSSQVWPSMNLYPNSTNMLSKPEFQQNLIATCDEQFQTHPAY----AKLGPQGIDLLRRLLRYEPGERLTAAQALEHPYF 297          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: SPK1_SCHPO (Mitogen-activated protein kinase spk1 OS=Schizosaccharomyces pombe GN=spk1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 37/117 (31.62%), Postives = 59/117 (50.43%), Query Frame = -1
Query:  436 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE--FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPP 780
            GC++AE+L  +PLFPG+    Q+  I+ +LGTPT ++   +         K     P    K    +  P+A+DL+ +   ++P+ R TA EA  HP+     D +   P   P+PP
Sbjct:  229 GCILAEMLSARPLFPGKDYHSQITLILNILGTPTMDDFSRIKSARARKYIKSLPFTPKVSFKALFPQASPDAIDLLEKLLTFNPDKRITAEEALKHPYVAAYHDASDE-PTASPMPP 344          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: MK11_HUMAN (Mitogen-activated protein kinase 11 OS=Homo sapiens GN=MAPK11 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 38/114 (33.33%), Postives = 58/114 (50.88%), Query Frame = -1
Query:  445 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQ--KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 780
            GC+MAELL G+ LFPG   +DQL  I++V+GTP+ E +  ++  +       + P P   +    +   P A+DL+ R      + R +A EA  H +F +  DP    P   P
Sbjct:  210 GCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAEP 322          
The following BLAST results are available for this feature:
BLAST of CF836016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
HOG1_DEBHA3.478e-1133.94Mitogen-activated protein kinase HOG1 OS=Debaryomy... [more]
HOG1_CANAL3.478e-1133.94Mitogen-activated protein kinase HOG1 OS=Candida a... [more]
CDK17_RAT3.478e-1133.08Cell division protein kinase 17 OS=Rattus norvegic... [more]
MK14A_DANRE4.543e-1131.65Mitogen-activated protein kinase 14A OS=Danio reri... [more]
MK12_MOUSE4.543e-1137.74Mitogen-activated protein kinase 12 OS=Mus musculu... [more]
MAPK2_PNECA4.543e-1136.67Mitogen-activated protein kinase 2 OS=Pneumocystis... [more]
CDK17_MOUSE4.543e-1133.08Cell division protein kinase 17 OS=Mus musculus GN... [more]
CC2H1_TRYCO4.543e-1136.61Cell division control protein 2 homolog 1 OS=Trypa... [more]
SPK1_SCHPO5.933e-1131.62Mitogen-activated protein kinase spk1 OS=Schizosac... [more]
MK11_HUMAN5.933e-1133.33Mitogen-activated protein kinase 11 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E13_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836016 ID=CF836016; Name=CF836016; organism=Citrus sinensis; type=EST; length=780bp
TTTTTTTTTTTTTTTTTAATATTTTACAGATTCTCATATTTTTCATCTCA
CTAAACTCGCCCATGAAACAGGGATACAACAAATTACATGATAAGTTAAA
AAAAAAAAAAAAATTGTCTTCATCCAAAGCCGTAACTCGTAATGACAAAT
AAACAAACTCAAAGCCTCAGTCAGGTCTCCCAAATTCTCCTAAACATTCC
TTCTGCAACACTCTTTCCTCACCGGAACTAAAGAGACAATGATAAATGAA
AAAACGGTGACGGATTTTTACAAGTGTCGATAAAACGTTCAAGATAAACT
TACGGAGGAGACTTGTAACAGATGCTAAGAGTGCAAAGCCATGAATAAGT
TCTGCTTACGAGCGTGCTCTGGGATGAGTCTGTTGATGGTTTCAGGTGGG
ATGCCCGAAAGCTCTGGAGGTTTAAAATTAAACAGGGGTGGAAGGGGGCG
ACCATTAGGAAGGCGGGTGTTTGGGTCCCTTAATTCATCAAAGAAAGGGT
GAACACAAGCTTCCAGAGCAGTGCATCGTAAGTTGGGAGAGTACTGGAAA
AATCTACAGACGAGGTCCACAGCTTCTGGGGGTAAACGCTTTTGGAAGAC
CTTGTGCCACGGATGAGGCTTTATCTGTGGGAACTTAAATTCTGTATAGT
TTGGATTCATGCACTTTATCTCCTCTCGGGTTGGTGTTCCCAAAACCTTG
ATAATCTCAACTAGTTGGTCAACTCCACTTTCACCAGGAAACAAAGGCTG
TCCAAGAAGCAACTCAGCCATCACACAACC
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