CF836031

Overview
NameCF836031
Unique NameCF836031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.283e-19
Identity = 67/199 (33.67%), Postives = 95/199 (47.74%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGAD--TIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            SV L+GGP ++VP GRRDG  +N +  D NLP P   +      F   G+N N  +  + G H+ G A C  F  RL         D              C    + +  T LD  T    DN  +  ++   G+L+ DQ L    G D  T  IV+ ++S+ T F + FA ++++MG + +LTG  GEIR NCR  N
Sbjct:  127 SVALAGGPRFSVPTGRRDGLRSNPN--DVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL--------SDRAMEPSLKSSLRRKCSSPNDPT--TFLDQKTSFTVDNAIYGEIRRQRGILRIDQNL----GLDRSTSGIVSGYASSNTLFRKRFAEALVKMGTIKVLTGRSGEIRRNCRVFN 309          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.676e-19
Identity = 65/197 (32.99%), Postives = 93/197 (47.21%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            S+ L+GGP + V  GRRDG  +N S  D  L  P  ++      F ++G N +T +  + G HT G A C  F  R+         DP             C    + SV   +D +TP   DN+ +  +     +L+ D  L       T  IV++F+ N   F ESFA +M +MG + +LTG  GEIR+NCR  N
Sbjct:  127 SIALAGGPKFKVRTGRRDGLRSNPS--DVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI--------KDPKMDSKLRAKLKKSCRGPNDPSVF--MDQNTPFRVDNEIYRQMIQQRAILRIDDNLIRD--GSTRSIVSDFAYNNKLFKESFAEAMQKMGEIGVLTGDSGEIRTNCRAFN 309          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18
Identity = 65/201 (32.34%), Postives = 98/201 (48.76%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNP---DPXXXXXXXXXXXXLCPQGGNGSV-LTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            +V   GGP   +P GRRDGR +  +    N+     T+D +   F++ GL+ + DLV LSGAHT G A C  F+ R F  +  GN    D              C    + +  + + D  T   FDN Y+ NL A+ GL Q+D  L       T  IV   ++++ +FF+ +  S ++M  + +  G +GEIR +C  VN
Sbjct:  133 AVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVH-DLVVLSGAHTIGAAHCNTFNSR-FKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDR--TRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSCSAVN 329          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.391e-18
Identity = 70/195 (35.90%), Postives = 92/195 (47.18%), Query Frame = -1
Query:  211 GPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNL 795
            G ++TV LGR+D RTAN + A+  L  P + L     +F   G N  T++VAL G+HT G A+C       F      NP               C    N + L  LD  TP  +D  YFS++  + GLL SD EL    G  T   V  +     AF   FA +M++M NL    G   EIR  C RVNAN++
Sbjct:  172 GSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFN-GTEMVALLGSHTIGFARCPLLCISTFI-----NP------ARVSTLNCNCSGTVNATGLVGLD-PTPTTWDQRYFSDVVNDQGLLFSDNELLK--GNTTNAAVRRYRDAMGAFLTDFAAAMVKMSNLPPSPGVALEIRDVCSRVNANSV 351          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18
Identity = 64/201 (31.84%), Postives = 97/201 (48.26%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDG-RTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTG-NPDPXXXXXXXXXXXXLCP--QGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            +V L+GGP  +VPLGR+D   T ++ +AD  LP     +D     F N G+    + VA+ GAHT G   C     R  N N T  N DP              P  Q    + + N   S    FD  Y+ +  A  G L+ D E+ + P   T P V  F++++  FF +F+ + +++ +  +LTG +G IRS C +V+
Sbjct:  144 AVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIE-ESVAIMGAHTIGVTHCNNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQTSVI--FDTAYYDDAIAGRGNLRIDSEIGADPR--TRPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCDKVD 339          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.265e-16
Identity = 58/198 (29.29%), Postives = 89/198 (44.95%), Query Frame = -1
Query:  214 GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQG---GNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANN 798
            GGP   +  GRRDG  +   + +  LP   +++ ++  +F ++G+ D   LVAL G+H+ GR  C     RL+        DP             CP              D  TP   DN+Y+ N+  N GLL  D +L       T PIV   + ++  FF+ F  ++  +   + LTG++GEIR  C   N N+
Sbjct:  141 GGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGI-DTPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQL--AHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLANKNH 330          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 58/201 (28.86%), Postives = 96/201 (47.76%), Query Frame = -1
Query:  211 SGGPS-WTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLD--LSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQ-GEIRSNCRRVNANNL 801
            SGG + + +P GR DG+ ++  L D  LP+P  T+     +F    L+ N D+V L G HT G   C F   RL+NF  T  PDP             CP+  +   + +LD   ++ +  D  ++  ++ + G+L  DQ+L      D    +    +N   F   F  +M+ +G++ +++  + GEIR +CR    N L
Sbjct:  135 SGGKTRYEIPTGRLDGKISSALLVD--LPSPKMTVAETAAKFDQRKLSLN-DMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSAKCPKSSSTDGIISLDQNATSSNTMDVSFYKEIKVSRGVLHIDQKLAID---DLTSKMVTDIANGNDFLVRFGQAMVNLGSVRVISKPKDGEIRRSCRSTCNNPL 329          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.504e-15
Identity = 62/199 (31.16%), Postives = 87/199 (43.72%), Query Frame = -1
Query:  223 VNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQ---GGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 810
            V L G     +  GRRD R +     +  +P    +L  +   F ++G+ D    VAL GAH+ GR  C     RL+        DP             CP      N  + +  D  TP   DN Y+ N+ A+ GLL  D EL + P   T P V   +++   F E F+  +  +   + LTG QGEIR +CR VN
Sbjct:  137 VMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGI-DVEATVALLGAHSVGRVHCVNLVHRLYP-----TIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPR--TAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.517e-15
Identity = 59/194 (30.41%), Postives = 91/194 (46.91%), Query Frame = -1
Query:  223 GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNL--DLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 798
            G  S+ +P GR DG  +N S + + L  P   L  L   F   G++   DLV LSGAHT GR+ C  F     +     NP               CP     S    +  D+ TP+  D  Y+ N+ ++  L  SD  L ++P  +T  +V + +     + + F  +M++M +L + TG QG++R NCR +N
Sbjct:  149 GKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLE-DLVVLSGAHTVGRSHCSSFVSDRLDVPSDINP------ALAAFLRTRCPPNTTTSDDPTVMQDVVTPNAMDIQYYKNVLSHTVLFTSDAALLTSP--ETAKLVLDNAKIPGWWEDKFEKAMVKMASLEVKTGHQGQVRKNCRAIN 333          
The following BLAST results are available for this feature:
BLAST of CF836031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER44_ARATH1.283e-1933.67Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER8_ARATH1.676e-1932.99Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER18_ARATH1.419e-1832.34Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PERA_IPOBA5.391e-1835.90Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER29_ARATH7.041e-1831.84Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER42_ARATH2.265e-1629.29Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER60_ARATH1.918e-1528.86Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER21_ARATH2.504e-1531.16Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER2_MAIZE9.517e-1530.41Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02E22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836031 ID=CF836031; Name=CF836031; organism=Citrus sinensis; type=EST; length=813bp
CCCCTCAGTTTTTTTTTTTTTTTTCCATTTCCAACGGGCTCATAATTTTA
TTCACATTTTGAAAATATTGTTAGGACAAACACGAGACAAGGTACCTTAG
TTTGTTACCCACAAACTCTCAACAGCAAAACTACTTCACACAGTTTTATT
TTATGCTTTCATGATTTAGATAGAGCTGACCAAACCGCCATCTGATGATG
ATCTGGTTGATAAATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATC
TCTCCTTGAGTCCCTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGA
AACCGCAAAGCTTTCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGA
CAATGGGAATGGTATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTC
TGTAAAAGGCCATTGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAA
ACCATCCGGTGTTGAGAGATCAAGATTCGTTAGGACGCTGCCATTGCCAC
CTTGCGGGCACAGCTGCTGCAGTTGTGCTAAGAGAGTTGCGTTCAGCGTT
GGGTCTGGATTGCCAGTTCCATTGAAATTGAATAATCTTTGGCTGAAAAA
TTGACACTGTGCCCTTCCAAAAGTGTGAGCGCCGGAGAGTGCAACCAGAT
CAGTATTGTCGTTGAGACCGACATTTGTAAATCTGCCTTTGAGCAAATCA
AGAGTCTGAAATGGTGTTGGAAGATTCTGATCTGCAAGGCTCCTGTTCGC
TGTCCTGCCGTCTCTTCTTCCCAGTGGAACTGTCCATGAAGGACCACCTG
ACAAATTGACGGA
back to top