CF836031

Overview
NameCF836031
Unique NameCF836031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.012e-32
Identity = 82/192 (42.71%), Postives = 108/192 (56.25%), Query Frame = -1
Query:  223 GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 798
            GGP + V +GRRD   A R++AD++LP    +L+ L   F   GLN   DLVALSGAHT G+AQC  F  RL++ +                    CP  G  + L  LD  TP+ FDN+Y+ NL    GLL+SDQ LF T GA T  IV  +S N + F   F+ +MI+MG++  LTG+ G+IR  C  VN
Sbjct:  132 GGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTR-DLVALSGAHTLGQAQCLTFKGRLYDNSSD------IDAGFSSTRKRRCPVNGGDTTLAPLDQVTPNSFDNNYYRNLMQKKGLLESDQVLFGT-GASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQIRRICSAVN 315          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.726e-32
Identity = 80/199 (40.20%), Postives = 111/199 (55.78%), Query Frame = -1
Query:  220 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGG-NGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNA 813
            SV ++GG  + VP GRRDGR +  S A  NLP P  T+D L   F+N GL  + ++V LSGAHT GR+ C  FS RL+NFNGT   DP             CPQG  N +++  ++ S+P   D  Y+ ++  N GL  SDQ L +     T   V   + N   +   FA +M++MG L +L G  G+IR+NCR +N+
Sbjct:  167 SVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQD-EMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCPQGSTNTNLVVPMNPSSPSITDVGYYVDVLRNRGLFTSDQTLLT--DTTTATQVRQNAGNPFLWKNKFASAMVKMGQLGVLIGEAGQIRANCRVINS 362          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.945e-32
Identity = 80/197 (40.61%), Postives = 108/197 (54.82%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            SV+L+ G SW VP GRRDGR +  S  + NLP+P  +L + + +F+   LN    +  + G HT G A C F + R+FN +G    DP            LCPQ G+GS   +LD  + + FD  YF NL  N G+LQSD  L+++P   T  IV  F +    F   FA SM++M N+ + TGT GEIR  C  VN
Sbjct:  127 SVSLTNGQSWQVPTGRRDGRVSLASNVN-NLPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSSGN-TADPTMDQTFVPQLQRLCPQNGDGSARVDLDTGSGNTFDTSYFINLSRNRGILQSDHVLWTSPA--TRSIVQEFMAPRGNFNVQFARSMVKMSNIGVKTGTNGEIRRVCSAVN 319          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.846e-32
Identity = 82/197 (41.62%), Postives = 108/197 (54.82%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            +V L+ G  W VP GRRDGR +  S A+ NLP P  ++ + + +F+ +GLN   DLV L G HT G A C  F  RLFN  G    DP             CPQ G+GSV  +LD  +   +D  Y++NL    G+LQSDQ L++ P   T PIV    +  + F   FA SM+RM N+ ++TG  GEIR  C  VN
Sbjct:  137 TVILTQGTGWQVPTGRRDGRVSLASNAN-NLPGPRDSVAVQQQKFSALGLNTR-DLVVLVGGHTIGTAGCGVFRNRLFNTTGQ-TADPTIDPTFLAQLQTQCPQNGDGSVRVDLDTGSGSTWDTSYYNNLSRGRGVLQSDQVLWTDPA--TRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTGANGEIRRVCSAVN 328          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 5.023e-32
Identity = 84/199 (42.21%), Postives = 113/199 (56.78%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNP-DPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQEL-FSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            SV +SGGP W V +GR+D RTA++  A   LP+P  T+  L   F N+GL+  TD+VALSG HT G+A+C  F+ RL     TG P +             LC   G    +T LDL TP  FDN Y+ NL +  GLL SDQ L    PG  T  IV  ++++++ FFE F  +M++MG +    G+  EIR NCR +N
Sbjct:  156 SVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLS-QTDMVALSGGHTLGKARCTSFTARLQPLQ-TGQPANHGDNLEFLESLQQLCSTVGPSVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPG--TRAIVETYATDQSVFFEDFKNAMVKMGGIP--GGSNSEIRKNCRMIN 348          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.560e-32
Identity = 81/199 (40.70%), Postives = 109/199 (54.77%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCP--QGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            SV + GGP W V LGRRD +TA+ S A+ N+P P  +L  L  +F   GL+   D+VALSGAHT G+A+C  F  R++N       +              CP   G   + L  LDL TP  FDN Y+ NL    GLL SDQ L++  G  T   V  + +N   F   F   MI+MG+++ LTG++GEIR +C +VN
Sbjct:  133 SVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLS-TRDMVALSGAHTIGQARCTSFRARIYN-------ETNIDSSFAKTRQASCPSASGSGDNNLAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYN--GGSTDSTVKTYVNNPKTFTSDFVAGMIKMGDITPLTGSEGEIRKSCGKVN 321          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.119e-31
Identity = 80/197 (40.61%), Postives = 108/197 (54.82%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            +V L GGPS+ VP GRRDG  +N   A++ LP PF +++ +   F N G+N   D VAL GAHT G A C  F  R+ NF GTG PDP             C   G  + L      TP  FDN +F  ++   G+L  DQ + S P   T  +V  ++SN   F   FA++M++MG + +LTG+ GEIR+NCR  N
Sbjct:  128 AVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNV-FDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTCAVPGGFAALDQSMPVTPVSFDNLFFGQIRERKGILLIDQLIASDPA--TSGVVLQYASNNELFKRQFAIAMVKMGAVDVLTGSAGEIRTNCRAFN 321          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.461e-31
Identity = 77/188 (40.96%), Postives = 105/188 (55.85%), Query Frame = -1
Query:  235 GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNC 798
            GGPSWTV LGRRD  T+N + A  +LP     L  L   F N GLN   ++VALSG+HT G+A+C  F  R++N      P+              CP  GN + L  LDL TP+ FDN+Y+ NL  + GLL SDQ LF+    D+  IV  + +N   F   FA +M++M  + ++TGT G +R+ C
Sbjct:  139 GGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTR-EMVALSGSHTLGQARCIRFRGRIYNSTLRIEPN------FNRSLSQACPPTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDS--IVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.461e-31
Identity = 77/188 (40.96%), Postives = 105/188 (55.85%), Query Frame = -1
Query:  235 GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNC 798
            GGPSWTV LGRRD  T+N + A  +LP     L  L   F N GLN   ++VALSG+HT G+A+C  F  R++N      P+              CP  GN + L  LDL TP+ FDN+Y+ NL  + GLL SDQ LF+    D+  IV  + +N   F   FA +M++M  + ++TGT G +R+ C
Sbjct:  139 GGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTR-EMVALSGSHTLGQARCIRFRGRIYNSTLRIEPN------FNRSLSQACPPTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDS--IVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.252e-31
Identity = 79/197 (40.10%), Postives = 112/197 (56.85%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            +V L+GGP W V LGR+D  TA++  +D  +P+P      L   F    L+   D+VALSG+H+ G+ +C     RL+N +G+G PDP            LCP GG+ +V  +LD +TP  FDN YF +L +  G L SDQ L++     T   V  FS ++  FF +FA  M+++G+L   +G  GEIR NCR VN
Sbjct:  129 AVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVK-DMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLGGDENVTGDLD-ATPQVFDNQYFKDLVSGRGFLNSDQTLYT--NLVTREYVKMFSEDQDEFFRAFAEGMVKLGDLQ--SGRPGEIRFNCRVVN 319          
The following BLAST results are available for this feature:
BLAST of CF836031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER4_ARATH1.012e-3242.71Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER5_VITVI1.726e-3240.20Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER62_ARATH2.945e-3240.61Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER71_ARATH3.846e-3241.62Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER40_ARATH5.023e-3242.21Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER4_VITVI6.560e-3240.70Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER28_ARATH1.119e-3140.61Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER2_ZINEL1.461e-3140.96Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL1.461e-3140.96Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER17_ARATH4.252e-3140.10Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836031 ID=CF836031; Name=CF836031; organism=Citrus sinensis; type=EST; length=813bp
CCCCTCAGTTTTTTTTTTTTTTTTCCATTTCCAACGGGCTCATAATTTTA
TTCACATTTTGAAAATATTGTTAGGACAAACACGAGACAAGGTACCTTAG
TTTGTTACCCACAAACTCTCAACAGCAAAACTACTTCACACAGTTTTATT
TTATGCTTTCATGATTTAGATAGAGCTGACCAAACCGCCATCTGATGATG
ATCTGGTTGATAAATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATC
TCTCCTTGAGTCCCTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGA
AACCGCAAAGCTTTCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGA
CAATGGGAATGGTATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTC
TGTAAAAGGCCATTGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAA
ACCATCCGGTGTTGAGAGATCAAGATTCGTTAGGACGCTGCCATTGCCAC
CTTGCGGGCACAGCTGCTGCAGTTGTGCTAAGAGAGTTGCGTTCAGCGTT
GGGTCTGGATTGCCAGTTCCATTGAAATTGAATAATCTTTGGCTGAAAAA
TTGACACTGTGCCCTTCCAAAAGTGTGAGCGCCGGAGAGTGCAACCAGAT
CAGTATTGTCGTTGAGACCGACATTTGTAAATCTGCCTTTGAGCAAATCA
AGAGTCTGAAATGGTGTTGGAAGATTCTGATCTGCAAGGCTCCTGTTCGC
TGTCCTGCCGTCTCTTCTTCCCAGTGGAACTGTCCATGAAGGACCACCTG
ACAAATTGACGGA
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