CF836031

Overview
NameCF836031
Unique NameCF836031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.400e-28
Identity = 78/199 (39.20%), Postives = 101/199 (50.75%), Query Frame = -1
Query:  223 VNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFF---ESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 810
            V+L+GGP W VPLGR DGR +  S  +  LP P  ++ + K RF    LN   DLV L+  HT G A C  F  R FN++ TG+PDP             CP  G+ +    LD  + D FD  Y +NL+   GLL+SDQ L++    +T PIV         F      FA SM +M  + + TG  GEIR  C  VN
Sbjct:  137 VHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLNTQ-DLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDPATRVVLDTGSGDQFDTSYLNNLKNGRGLLESDQVLWT--NLETRPIVERLLGLRFPFLIFGLEFARSMTKMSQIEIKTGLDGEIRRVCSAVN 330          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.747e-28
Identity = 75/195 (38.46%), Postives = 107/195 (54.87%), Query Frame = -1
Query:  232 VNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCP-QGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQ-GEIRSNCR 810
            ++L+GGP + V  GR DG+ +       N+P    T+D L   F + GL    +LV LSG+HT G A C+ F  RL+++ GT  PDP             CP  GG+  V+  LD +TP  FDN YF+ L  N GLL SDQ LF  P   T PI    + ++  F ++F  +M +MG++ +  G + GEIR++CR
Sbjct:  152 IHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVE-ELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVVLPLDATTPFVFDNGYFTGLGTNMGLLGSDQALFLDP--RTKPIALEMARDKQKFLKAFGDAMDKMGSIGVKRGKRHGEIRTDCR 343          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.672e-27
Identity = 71/191 (37.17%), Postives = 94/191 (49.21%), Query Frame = -1
Query:  223 GPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 795
            GPSW V  GRRDGR +N  + + NLP+PF  +  L   F + GLN+  DLV LSG HT G   C   + RL+NF G G+ DP             C      + L  +D  +   FD  YF+ +    GL QSD  L          ++    ++ + FF  F VSM++MG   +LTG  GEIR  CR  N
Sbjct:  136 GPSWEVETGRRDGRVSN--INEVNLPSPFDNITKLISDFRSKGLNEK-DLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRKKCKPTDTTTAL-EMDPGSFKTFDLSYFTLVAKRRGLFQSDAALLDNSKTRAY-VLQQIRTHGSMFFNDFGVSMVKMGRTGVLTGKAGEIRKTCRSAN 321          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.415e-26
Identity = 75/199 (37.69%), Postives = 99/199 (49.75%), Query Frame = -1
Query:  235 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNE------TAFFESFAVSMIRMGNLSLLTGTQGEIRSNC 813
            +V + GGP W VPLGRRDGR +  + A  NLP+PF  +  LK  F N GLN   DLV LSG HT G + C   + RL+NF G G+ DP             CP     + L N+D  +   FD  YF  +    GL  SD  L      D I   N   +        ++F + F+ SM+++G + +LTG  GEIR  C
Sbjct:  130 AVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAK-DLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCPPTDFRTSL-NMDPGSALTFDTHYFKVVAQKKGLFTSDSTLL-----DDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEIRKRC 321          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 5.379e-26
Identity = 71/202 (35.15%), Postives = 105/202 (51.98%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGS-----VLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            +V+L+G PS+ V  GRRDG T+++   D  LP+P  + D     F + GLN   D+  L G+H+ GR  C +   RL+N+N TG P P             CP           V  N D  +   F + ++S + +N  +L+ DQ+L      DT  I   FS     F +SFA+SM +MG +++LT T+GEIR +CR +N
Sbjct:  139 AVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLNV-LDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDPLVYLNPDSGSNHSFTSSFYSRILSNKSVLEVDQQLLYND--DTKQISKEFSEGFEDFRKSFALSMSKMGAINVLTKTEGEIRKDCRHIN 335          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.175e-26
Identity = 71/191 (37.17%), Postives = 96/191 (50.26%), Query Frame = -1
Query:  223 GPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 795
            GPS+ V LGR DG  +  +  + NLP P   +  L   F    L    D++ALS AHT G A C     R++NFN T   DP             CP+  +  +  N+D +TP  FDN YF NLQ   GL  SDQ LF T G    P VN+++ N  AF ++F  +M ++G + + T   G IR +C   N
Sbjct:  142 GPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQE-DMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLF-TDGRSK-PTVNDWAKNSVAFNKAFVTAMTKLGRVGVKTRRNGNIRRDCGAFN 329          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.198e-25
Identity = 69/202 (34.16%), Postives = 107/202 (52.97%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFF-----ESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            +++L+ GP++ VP GRRDGR +N SLA +++P    ++++LK +F   GLN   DLV LS AHT G   C F S+RL++F   G PDP             CPQ G+ +V   +D  +   FD     N++    +LQ+D  L+      T  +V+++      FF       F  ++++MG + + TG +GEIR  C   N
Sbjct:  129 AISLANGPAYEVPTGRRDGRVSNMSLA-KDMPEVSDSIEILKAKFMQKGLNAK-DLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQNGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLYE--DVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKIGVKTGFKGEIRRVCSAFN 326          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25
Identity = 72/196 (36.73%), Postives = 100/196 (51.02%), Query Frame = -1
Query:  223 VNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 810
            V L GGP + V LGRRDG  +  S     LP P   +  L   F + GL+  TD++ALSGAHT G + C  F+ RL NF+     DP             C    N   + ++DL++ D FDN Y+ NL A  GL  SDQ LF+   +     V  F++N   F+ +F+ +M  +G + +  G QGEIR +C   N
Sbjct:  139 VVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLS-LTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSDP-NPDAVVDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFNDLSSQA--TVVRFANNAEEFYSAFSSAMRNLGRVGVKVGNQGEIRRDCSAFN 330          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25
Identity = 75/200 (37.50%), Postives = 94/200 (47.00%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNP---DPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            +V LS GP W VPLGRRDGR +  +  DQ LP P      L   F    L D  DLV LS  HT G + C  F+ RL+NF G  N    DP             C    + + L  +D  +   FD  YF N+    GL  SD EL +          +     +  FF  FA SM++MG + +LTG+QGEIR  C  VN
Sbjct:  129 AVWLSKGPFWAVPLGRRDGRVSIANETDQ-LPPPTANFTELTQMFAAKNL-DLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEMDPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKCNVVN 326          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25
Identity = 78/215 (36.28%), Postives = 114/215 (53.02%), Query Frame = -1
Query:  184 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFN---GTGNPDPXXXXXXXXXXXXLCPQGGNGS--VLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRSSSDGG 813
            S++L+G  S+ VP GRRDGR +N +    +LP P  T   L   F    L+   D+V LSGAHT GR+ C  F +R++N +    T   D             LCP     +  + T +D  TP+  DN+Y+  L    GL  SD +L   P      +V++F+SNET + E FA +M++MG + + TGT GE+R NC  VN +  S+ S+ + G
Sbjct:  142 SISLTGSVSYQVPAGRRDGRVSNAT-ETVDLPPPTSTAQSLTDLFKAKELSVE-DMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPITTAMDPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNP--QMAALVSSFASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNCGVVNPSLYSSSSAVELG 352          
The following BLAST results are available for this feature:
BLAST of CF836031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER70_ARATH4.400e-2839.20Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER19_ARATH5.747e-2838.46Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER27_ARATH1.672e-2737.17Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER1_ARATH1.415e-2637.69Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER26_ARATH5.379e-2635.15Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER73_ARATH9.175e-2637.17Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER43_ARATH1.198e-2534.16Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER55_ARATH1.565e-2536.73Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER1_ORYSJ1.565e-2537.50Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER1_MAIZE1.565e-2536.28Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836031 ID=CF836031; Name=CF836031; organism=Citrus sinensis; type=EST; length=813bp
CCCCTCAGTTTTTTTTTTTTTTTTCCATTTCCAACGGGCTCATAATTTTA
TTCACATTTTGAAAATATTGTTAGGACAAACACGAGACAAGGTACCTTAG
TTTGTTACCCACAAACTCTCAACAGCAAAACTACTTCACACAGTTTTATT
TTATGCTTTCATGATTTAGATAGAGCTGACCAAACCGCCATCTGATGATG
ATCTGGTTGATAAATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATC
TCTCCTTGAGTCCCTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGA
AACCGCAAAGCTTTCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGA
CAATGGGAATGGTATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTC
TGTAAAAGGCCATTGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAA
ACCATCCGGTGTTGAGAGATCAAGATTCGTTAGGACGCTGCCATTGCCAC
CTTGCGGGCACAGCTGCTGCAGTTGTGCTAAGAGAGTTGCGTTCAGCGTT
GGGTCTGGATTGCCAGTTCCATTGAAATTGAATAATCTTTGGCTGAAAAA
TTGACACTGTGCCCTTCCAAAAGTGTGAGCGCCGGAGAGTGCAACCAGAT
CAGTATTGTCGTTGAGACCGACATTTGTAAATCTGCCTTTGAGCAAATCA
AGAGTCTGAAATGGTGTTGGAAGATTCTGATCTGCAAGGCTCCTGTTCGC
TGTCCTGCCGTCTCTTCTTCCCAGTGGAACTGTCCATGAAGGACCACCTG
ACAAATTGACGGA
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