CF836032

Overview
NameCF836032
Unique NameCF836032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.018e-25
Identity = 72/234 (30.77%), Postives = 111/234 (47.44%), Query Frame = 3
Query:    3 QFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSI----DALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSMP 689
            +++WS G+ISD+    +   CD+ +  + S++C   +  +      I+ Y I    C  S+ Q    LK+M+                            ALH      P +W  CS  +N + +D    +L   + +I +   +W+FSGD D+VIP+ S+R  +    + LN  T  P+ AW+ + QVGGW  EY   LTF TVRGA H VP   P  AL +  SF++ R +P
Sbjct:  226 EYFWSHGMISDEVRLTIMNQCDFANPKNMSNACIYAIVESSVLTEYINSYHILLDVCYPSIVQQELRLKKMN----------------------------ALHANRTRLPYEWTMCSNRLNYSGIDGYIDMLPSLKRIIQNQTPVWIFSGDQDSVIPLQSSRTLVRELAEDLNFKTTIPYGAWFHKEQVGGWVTEYGNLLTFATVRGAAHMVPYAEPSRALHMFSSFMNGRRLP 431          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.004e-22
Identity = 68/255 (26.67%), Postives = 116/255 (45.49%), Query Frame = 3
Query:   21 GLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTP-------------SCTASVSQSNRLLKRMHVVG-------------HP----------SEKYDPCTEKH-SVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEY-SGLTFVTVRGAGHEVPLHRPKPALTLIKSFL 671
            GLISD+ ++ +   C    +      C++     +++   ++ Y+I  P             S  +S+ Q  +  KR+ +               HP          ++   PC +   +  + N PE++KA+H        +WE CSG ++  +     +++D +R L  SG R  ++SGD D  +P T +     +L    +  WRAW    QV G+TQ Y + LTF+T++GAGH VP ++P+ AL     FL
Sbjct:  240 GLISDELFENVTKACKGNFYEIEGLECEEQYTKVNDDTNQLNIYNILEPCYHGTSLSAFDIRSLPSSLLQLGKTEKRLPIRKRMFGRAWPVRAPVHPGIVPSWSQLLADVTVPCIDDRVATAWLNDPEIRKAIHTKEESEIGRWELCSGKLS--FYHDAGSMIDFHRNLTLSGYRALIYSGDHDMCVPFTGSEAWTKSLGYKVIDEWRAWISNDQVAGYTQGYANNLTFLTIKGAGHTVPEYKPREALDFYSRFL 492          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 77/263 (29.28%), Postives = 122/263 (46.39%), Query Frame = 3
Query:   24 LISDDTYKQLNLLCDYESFVHPS-SSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRL-----------------------LKRMHVVGHPSEKYD-------------PCTEKHSVV-YFNQPEVQKALHVIPAVA-PAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQ----VGGWTQEYS----GLTFVTVRGAGHEVPLHRPKPALTLIKSFL 671
            LIS   Y++    C  + + + +  +C K L  + N +GNI+ Y I+       ++   +L                       L +M+  G  S++               PC    S+  YF + +VQ+AL V    A P  W  C+G++N   + S  T+L  Y +L+   +RI ++SGDTD V+    T+ +ID L L     WR W  +      VGG+ +++     GLTF+TVRGAGH VPL +P  A  + K+F+
Sbjct:  218 LISIKYYEEGYKACQGDFYANQNLPACQKFLTDSSNAMGNINPYYIYDSCPWLGINLQQKLKTTQEMTFQVLDPKTQQPVKIHPLFQMYKHGGWSKRVANERNFAPRFETDAPCVPNQSIAKYFRRLDVQQALGVRRKTADPNGWNICTGIINYTQVYS--TILPFYAKLLPH-IRILVYSGDTDMVVNGLGTQAAIDKLQLQETSSWRTWEFDSALGTVVGGYIRKFEKSGKGLTFITVRGAGHMVPLVKPDSAFYMFKNFI 477          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.173e-19
Identity = 73/252 (28.97%), Postives = 131/252 (51.98%), Query Frame = 3
Query:    6 FWWSAGLISDDTYKQL-------NL-LCD-YESFVHPSSSCDKVLDVAD--NELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTE-------KHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTV----KPWRAWYDEGQVG----GWTQEYSG-LTFVTVRGAGHEVPLHRPKPALTLIKSFLSXR 680
            F++   L+ DD Y  +       N+  CD Y  F  P+   DKV++  D  NEL   + Y +   + T ++ ++    +    VG P+ K++  T         ++ VY N+ +V+K+LH IP+  PA WE CS  V  N++ +   V+  ++ +I +G++I +++GD D        +  + +LNL  +    K   AW+  GQ G    G+  +++G + F+TVRG+GH VP  +PK +  +I +F++ +
Sbjct:  214 FYYYHALVRDDLYNDIARNCCNNNIGTCDIYSKFFDPNCR-DKVINALDGTNELNMYNLYDVCYYNPTTNLKKAFIERQMRIAVGLPARKHNAATTVPLCAQTNNTHVYLNRADVRKSLH-IPSSLPA-WEECSDQVGKNYVVTHFNVIPEFQTMIAAGIKILVYNGDVDTACNSIMNQQFLTSLNLTVLGEQEKVNEAWHYSGQTGTAVAGFQTKFAGNVDFLTVRGSGHFVPEDKPKESQQMIFNFINNK 462          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.173e-19
Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = 3
Query:  249 PCTEKH-SVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEY-SGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 674
            PC +   +  + N P V+KA+H     A   WE CS   N  +     ++++ +R L  SG R  +FSGD D  +P T +     A+    V  WR W    QV G+TQ Y + LTF+T++GAGH VP ++P+ +L     FL+
Sbjct:  349 PCIDDTVATKWLNDPAVRKAVHAKEEKAIGNWELCSS--NLEYRHDTGSMIEYHRNLTLSGFRALIFSGDHDMCVPYTGSEAWTKAMGYKVVDEWRPWMSNNQVAGFTQGYANNLTFLTIKGAGHTVPEYKPRESLDFYSRFLA 490          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.173e-19
Identity = 65/260 (25.00%), Postives = 111/260 (42.69%), Query Frame = 3
Query:   24 LISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTP----SCTASVSQSNRLLK-----------------RMHVVGHPSE--------------------KYDPC-TEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYS-GLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 674
            LISDD Y++    C    +   +  C+  L   D  + +++ Y I  P         V+ +N  L                  RMH    P                         PC +++ +  + N  +V+ A+H  P  +   W  C+ V++  ++    +++  ++ L   G R +++SGD D  +P T T     +L    +  WR W+  GQV G+TQ Y  GLTF T++GAGH VP ++P+ +L     +L+
Sbjct:  249 LISDDIYQEAQTACHGNYWNTTTDKCENALYKVDTSINDLNIYDILEPCYHSKTIKKVTPANTKLPKSFQHLGTTTKPLAVRTRMHGRAWPLRAPVRAGRVPSWQEFARGSRPSGVPCMSDEVATAWLNNDDVRAAIHAQPVSSIGSWLICTNVLD--FIHDAGSMISYHKNLTGQGYRAFIYSGDHDMCVPYTGTEAWTRSLGYGVIDSWRPWHLNGQVSGYTQGYEHGLTFATIKGAGHTVPEYKPQESLAFYSRWLA 506          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16
Identity = 62/257 (24.12%), Postives = 110/257 (42.80%), Query Frame = 3
Query:   21 GLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVS------QSNRLLKRMHVVGHPSEKYD-------------------------------PC-TEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYS-GLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 674
            GLISD+ Y+Q +  C    +      CD  +   ++ +  ++ Y I  P C  S S      Q+++L +    +G  ++ +                                PC +++ +  + +   V+ A+H     A   W  C+  +   ++    +++  ++ L   G R  +FSGD D  +P T +     +L    V  WR W   GQV G+T+ Y  GLTF T++GAGH VP ++P+ A      +L+
Sbjct:  242 GLISDEIYQQASTSCHGNYWNATDGKCDTAISKIESLISGLNIYDILEP-CYHSRSIKEVNLQNSKLPQSFKDLGTTNKPFPVRTRMLGRAWPLRAPVKAGRVPSWQEVASGVPCMSDEVATAWLDNAAVRSAIHAQSVSAIGPWLLCTDKLY--FVHDAGSMIAYHKNLTSQGYRAIIFSGDHDMCVPFTGSEAWTKSLGYGVVDSWRPWITNGQVSGYTEGYEHGLTFATIKGAGHTVPEYKPQEAFAFYSRWLA 495          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.248e-15
Identity = 50/149 (33.56%), Postives = 82/149 (55.03%), Query Frame = 3
Query:  249 PCTEKHSVV-YFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSG-LRIWMFSGDTDAVIPVTSTRYSIDALNLPTV---KPWRAWYDEG--QVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 674
            PCT   +   Y N P V+KALH IP   P +W+ C+ +VN  +    +++   Y +L+ +   RI +++GD D         + +D+LN       +PW   Y E   Q+ G+ +E+S + F+T++GAGH VP  +P+ ALT+   FL+
Sbjct:  329 PCTNTTAASNYLNDPHVRKALH-IPEQLP-RWDLCNFLVNIQYRRLYQSMCSQYLKLLSAQKYRILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPQAALTMFSRFLN 475          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.379e-14
Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 3
Query:  249 PCTEKHSVV-YFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSG-LRIWMFSGDTDAVIPVTSTRYSIDALNLPTV---KPWRAWYDEG--QVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 674
            PCT   +   Y N P V+KALH IP   P +W+ C+ +VN  +    +++   Y +L+ S   +I +++GD D         + +D+LN       +PW   Y E   QV G+ +E S +TF+T++GAGH VP  +P+ A T+   FL+
Sbjct:  324 PCTNTTAPSNYLNNPYVRKALH-IPESLP-RWDMCNFLVNLQYRRLYQSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQVAGFVKECSHITFLTIKGAGHMVPTDKPRAAFTMFSRFLN 470          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.013e-14
Identity = 61/231 (26.41%), Postives = 108/231 (46.75%), Query Frame = 3
Query:   12 WSAGLISDDTYKQLNLLCDYESF-VHPSSS-CDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSV-VYFNQPEVQKALHVIPAVAPAKWETCSGVV--NNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSM 686
            +  GLISD+ Y+ +  +C+   + V PS++ C K+ +        I+ + I TP C  +   S            P   Y P    H +  + N   V++ALH+    +  KW  C+  +  N++ + S    +  +     SG R  ++SGD D  +P  +T+  I +LN   +  WR W    Q+ G+T+ YS  +TF T++G GH    +RP     + + ++S + +
Sbjct:  224 YGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDCDVTNVTS------------PDCYYYPY---HLIECWANDESVREALHIEKG-SKGKWARCNRTIPYNHDIVSS----IPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKGGGHTAE-YRPNETFIMFQRWISGQPL 433          
The following BLAST results are available for this feature:
BLAST of CF836032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
SCP43_ARATH1.018e-2530.77Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
SCP20_ARATH4.004e-2226.67Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
NF314_NAEFO1.860e-1929.28Virulence-related protein Nf314 OS=Naegleria fowle... [more]
YSS2_CAEEL3.173e-1928.97Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
SCP21_ARATH3.173e-1935.42Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
CBP1_ORYSJ3.173e-1925.00Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
CBP1_HORVU1.474e-1624.12Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
PPGB_BOVIN1.248e-1533.56Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]
PPGB_MOUSE1.379e-1434.23Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
SCP8_ARATH4.013e-1426.41Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836032 ID=CF836032; Name=CF836032; organism=Citrus sinensis; type=EST; length=741bp
TCCAGTTTTGGTGGTCAGCTGGTTTGATATCTGATGATACGTACAAGCAA
CTAAACCTTCTATGTGATTATGAGTCCTTTGTCCACCCCTCCAGTTCTTG
TGATAAGGTCCTAGATGTTGCTGATAATGAACTTGGAAACATTGACCAAT
ACAGTATTTTCACCCCTTCCTGCACTGCCAGTGTTAGCCAGTCAAATCGG
CTGCTTAAAAGAATGCATGTTGTTGGTCACCCCAGCGAGAAGTATGATCC
TTGCACTGAGAAGCACTCAGTTGTGTACTTCAATCAACCTGAGGTTCAAA
AGGCTCTCCATGTTATTCCAGCAGTTGCACCGGCAAAATGGGAGACTTGC
AGTGGTGTGGTAAATAATAACTGGCTGGATTCTCCTAGGACAGTGCTGGA
CATTTATCGTGAGCTTATACATTCTGGACTTCGTATATGGATGTTCAGTG
GTGATACAGATGCTGTGATCCCAGTTACGTCCACCCGTTACAGCATAGAT
GCTCTTAATCTTCCAACAGTGAAGCCCTGGCGTGCCTGGTATGACGAGGG
GCAGGTGGGAGGATGGACCCAAGAGTATTCTGGACTTACCTTTGTCACCG
TGAGGGGAGCAGGCCACGAAGTCCCATTGCATAGACCCAAACCTGCTCTC
ACACTAATCAAAAGCTTTCTATCANGAAGGTCAATGCCATGCTTGAAACG
AGTCAGCCACAGTGACTCATGAAGCTTGCATTCTCACTTGA
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