CF836032

Overview
NameCF836032
Unique NameCF836032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP12_ARATH (Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.242e-14
Identity = 56/224 (25.00%), Postives = 105/224 (46.88%), Query Frame = 3
Query:   24 LISDDTYKQLNLLCDYESF-VHP-SSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSM 686
            LISD+ Y+ +   C    F V P ++ C K+++        +++++I +P C    +  +  L   +++G+               + N   V+ ALHV  + +  KWE C+      +       +  +     SG R  ++SGD D V+P  +T+  I +LN   +  WR W  + Q+ G+T+ YS  +TF TV+G+GH    ++P     + + ++S   +
Sbjct:  231 LISDELYESIRRDCKGNYFNVDPRNTKCLKLVEEYHKCTDELNEFNILSPDC--DTTSPDCFLYPYYLLGY---------------WINDESVRDALHVNKS-SIGKWERCTYQNRIPYNKDINNSIPYHMNNSISGYRSLIYSGDHDLVVPFLATQAWIKSLNYSIIHEWRPWMIKDQIAGYTRTYSNKMTFATVKGSGHTAE-YKPNETFIMFQRWISGHDL 435          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14
Identity = 64/224 (28.57%), Postives = 101/224 (45.09%), Query Frame = 3
Query:   24 LISDDTYKQLNLLC--DYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSM 686
            LISD+ Y+ L   C  +Y S    ++ C K+L+     +  I +  I  P C    S    L        H   +Y          + N+  V+KAL V       KW  C+  +  N     R+ +  ++ +   G R  +FSGD D ++P   T+  I +LN   V  WR W  + QV G+T+ Y+  +TF TV+G GH    ++P     +IK +LS + +
Sbjct:  236 LISDEHYESLKRSCQGNYISVNPRNTKCLKLLEDFKKCVSGISEEYILKPDCMWLYSCMANL--------HSLSEY----------WANEKSVRKALLVNEGTV-RKWIRCNTEIAYN--KDIRSSVPYHKYISIEGYRSLVFSGDHDMLVPFLGTQAWIRSLNYSIVDDWRPWMVQNQVAGYTRTYANKMTFATVKGGGH-TSEYKPVETYIMIKRWLSGQPL 437          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14
Identity = 48/149 (32.21%), Postives = 80/149 (53.69%), Query Frame = 3
Query:  249 PCTEKHSV-VYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSG-LRIWMFSGDTDAVIPVTSTRYSIDALNLPTV---KPWRAWYDEG--QVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 674
            PCT   +   Y N P V+KAL+ IP   P +W+ C+ +VN  +    R++   Y +L+ S   +I +++GD D         + +D+LN       +PW   Y +   Q+ G+ +E+S + F+T++GAGH VP  +P  A T+   FL+
Sbjct:  330 PCTNTTAASTYLNNPYVRKALN-IPEQLP-QWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLN 476          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP16_ARATH (Serine carboxypeptidase-like 16 OS=Arabidopsis thaliana GN=SCPL16 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13
Identity = 59/227 (25.99%), Postives = 99/227 (43.61%), Query Frame = 3
Query:    3 QFWWSAGLISDDTYKQLNLLCDYES-FVHP-SSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGHEVPLHRPKPALTLIKSFLS 674
            QF     LIS++ Y+ +   C     FV P ++ C +++   DN +  I +  I  P C  +    +     +                 S  + N   V++AL V+      +WE C   + NN     ++ +  +++    G R  +FSGD D + P   T+  I +LN   +  WR W    QV G+T  Y+  +TF TV+G GH +  ++P     L K ++S
Sbjct:  226 QFAHGMALISNELYESMKRTCGGNYIFVDPLNTECLELIKDYDNCVSGIYENLILVPKCDLTSPDCHSYRSML-----------------SDYWANNESVRRALKVVEGTT-GRWERCKWTLQNN--KDIKSSIPYHKKNSIQGYRSLIFSGDHDMLTPYVGTQDWIRSLNYSIIDKWRPWMILDQVAGYTTTYANKMTFATVKGGGHTLD-YKPDENSILFKRWIS 431          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP10_ARATH (Serine carboxypeptidase-like 10 OS=Arabidopsis thaliana GN=SCPL10 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13
Identity = 58/209 (27.75%), Postives = 95/209 (45.45%), Query Frame = 3
Query:   24 LISDDTYKQLNLLC--DYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSVVYF------NQPEVQKALHVIPAVAPAKWETCSGVV--NNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGH 617
            LISD+ Y+ L   C  +YE+    ++ C ++++        I+   I  P C           K+ H +  P   Y         +YF      N   V++ALHV       +W+ C+  +  +NN + S    +  + +   +G R  ++SGD D  +P  +T+  I +LN   V  WR W    Q+ G+T+ YS  +TF TV+G GH
Sbjct:  230 LISDELYESLKRNCKGNYENVDPRNTKCVRLVEEYHKCTDKINTQHILIPDCD----------KKGHGITSPDCYY--------YLYFLIECWANNERVREALHVTKGTK-GQWQRCNWTIPYDNNIISS----VPYHMDNSINGYRSLIYSGDHDITMPFQATQAWIKSLNYSIVDDWRPWMINDQIAGYTRTYSNKMTFATVKGGGH 415          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP11_ARATH (Serine carboxypeptidase-like 11 OS=Arabidopsis thaliana GN=SCPL11 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13
Identity = 57/229 (24.89%), Postives = 107/229 (46.72%), Query Frame = 3
Query:   24 LISDDTYKQLNLLCDYESF-VHP-SSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSP-----RTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSM 686
            LISD+ Y+ +   C    F V P ++ C K+++        ++++ I +P C    +  +  L   +++                 + N   V+ ALHV    +  KWE C      N+L  P     ++ +  +     SG R  ++SGD D V+P  +T+  I +LN   +  WR W    Q+ G+T+ YS  +TF TV+G+GH    ++P+ +  + + +++ + +
Sbjct:  230 LISDELYESIREACKGNYFNVDPRNTKCLKLVEEFHKCTDKLNEFHILSPDC--DTASPDCYLYPFYLISF---------------WANDESVRDALHVNKR-SIGKWERC------NYLSKPYNKDIKSSVPYHMNNSVSGYRSLIYSGDHDLVVPFLATQAWIKSLNYSIIDEWRPWMIRDQITGYTRTYSNKMTFATVKGSGHTAE-NKPQESFIMFRRWINGQPL 433          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: YUW5_CAEEL (Uncharacterized serine carboxypeptidase F41C3.5 OS=Caenorhabditis elegans GN=F41C3.5 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 57/231 (24.68%), Postives = 94/231 (40.69%), Query Frame = 3
Query:    3 QFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVA------DNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPC-TEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 674
            QF W  GL   D Y+     CD    V+       +  VA      D  L N  + S++            + LK       P +   PC  +   + Y N P+V+KA+H+       KW+ CS  V   +      +    ++++ + +R+ ++ GDTD        +   D L L        W  + Q+ G+   + GL+F+T+RGAGH  P  R       ++ FL+
Sbjct:  253 QFLWFGGLNPYDLYRD----CDPNPSVNSKRMKHMLRGVAPAMAHFDELLKNQTKTSLY------------QFLKNKSQSQKPLKADVPCLNDTEMLSYMNNPKVRKAIHI--PFNLGKWDICSDKVTTTYQKQYTDMTPFIKKIVKNHVRVLLYYGDTDMACNFMMGQQFSDQLGLRRTLKKTPWKYDRQIAGFKTLFDGLSFITIRGAGHMAPQWRAPQMYYAVQQFLN 465          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: YUA6_CAEEL (Uncharacterized serine carboxypeptidase F13S12.6 OS=Caenorhabditis elegans GN=F13D12.6 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12
Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = 3
Query:  249 PCTEKHSVV-YFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWL----DSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG--LTFVTVRGAGHEVPLHRPKPALTLIKSFL 671
            PC ++  V  Y N+ +V+KAL  IP+  PA W  CS  ++  +     D    VL+      ++ L++ +++GD D        +   D L L   K    +  +GQ+GG+  +Y G  +TF TVRGAGH VP  +P  A  +I+SFL
Sbjct:  307 PCLDESPVTNYLNRQDVRKALG-IPSSLPA-WSICSNAISYGYKRQYGDMTSRVLNAVN---NNNLKMMLYNGDVDLACNALMGQRFTDKLGLTLSKKKTHFTVKGQIGGYVTQYKGSQVTFATVRGAGHMVPTDKPAVAEHIIQSFL 449          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12
Identity = 52/224 (23.21%), Postives = 104/224 (46.43%), Query Frame = 3
Query:   24 LISDDTYKQLNLLC--DYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSM 686
            LISD+ YK +  +C  +Y      ++ C K++      +  +++Y I  P C   ++  +  L R  ++                 + N   V++AL V    +  KW  C+   N ++    ++ +  + +    G R  +++GD D ++P  +T+  I +LN      W+ W    Q+ G+T+ YS  +TF T++G+GH    ++PK    + K ++S + +
Sbjct:  227 LISDELYKSMERICKGNYVKVDSLNTKCYKLIKDYQKCIHKLNKYHILLPDC--DITSPDCFLYRYTLI---------------TFWANNKSVREALQVNKG-SIGKWVQCN-YKNISYNYDIKSSVAYHMKNSIDGYRSLIYNGDHDMMVPFLATQAWIRSLNYSITDDWKPWMINDQIAGYTRSYSNKMTFATIKGSGHTAE-YKPKETSIMFKRWISAQPL 430          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP9_ARATH (Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12
Identity = 62/225 (27.56%), Postives = 105/225 (46.67%), Query Frame = 3
Query:   24 LISDDTYKQLNLLCDYESF-VHPSSS-CDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSV-VYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSM 686
            LISD+ Y+ L  +C    F V PS+  C K+++       NI+ +     +C  S +Q        H+   P   Y P    H V  + N   V++ALHV             G+   + +   R+ +  +     +G R  +FSGD D  +P  +T+  I +LN   +  WR W  +GQ+ G+T+ YS  +TF TV+G GH    + P+ +  + + ++S + +
Sbjct:  230 LISDELYESLKRICKGNYFSVDPSNKKCLKLVEEYHKCTDNINSHHTLIANCDDSNTQ--------HI--SPDCYYYPY---HLVECWANNESVREALHVDKGSIGEWIRDHRGIPYKSDI---RSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437          
The following BLAST results are available for this feature:
BLAST of CF836032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
SCP12_ARATH5.242e-1425.00Serine carboxypeptidase-like 12 OS=Arabidopsis tha... [more]
SCP17_ARATH8.941e-1428.57Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
PPGB_HUMAN8.941e-1432.21Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
SCP16_ARATH4.437e-1325.99Serine carboxypeptidase-like 16 OS=Arabidopsis tha... [more]
SCP10_ARATH5.795e-1327.75Serine carboxypeptidase-like 10 OS=Arabidopsis tha... [more]
SCP11_ARATH7.569e-1324.89Serine carboxypeptidase-like 11 OS=Arabidopsis tha... [more]
YUW5_CAEEL1.686e-1224.68Uncharacterized serine carboxypeptidase F41C3.5 OS... [more]
YUA6_CAEEL2.876e-1233.78Uncharacterized serine carboxypeptidase F13S12.6 O... [more]
SCP13_ARATH4.906e-1223.21Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]
SCP9_ARATH8.368e-1227.56Serine carboxypeptidase-like 9 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836032 ID=CF836032; Name=CF836032; organism=Citrus sinensis; type=EST; length=741bp
TCCAGTTTTGGTGGTCAGCTGGTTTGATATCTGATGATACGTACAAGCAA
CTAAACCTTCTATGTGATTATGAGTCCTTTGTCCACCCCTCCAGTTCTTG
TGATAAGGTCCTAGATGTTGCTGATAATGAACTTGGAAACATTGACCAAT
ACAGTATTTTCACCCCTTCCTGCACTGCCAGTGTTAGCCAGTCAAATCGG
CTGCTTAAAAGAATGCATGTTGTTGGTCACCCCAGCGAGAAGTATGATCC
TTGCACTGAGAAGCACTCAGTTGTGTACTTCAATCAACCTGAGGTTCAAA
AGGCTCTCCATGTTATTCCAGCAGTTGCACCGGCAAAATGGGAGACTTGC
AGTGGTGTGGTAAATAATAACTGGCTGGATTCTCCTAGGACAGTGCTGGA
CATTTATCGTGAGCTTATACATTCTGGACTTCGTATATGGATGTTCAGTG
GTGATACAGATGCTGTGATCCCAGTTACGTCCACCCGTTACAGCATAGAT
GCTCTTAATCTTCCAACAGTGAAGCCCTGGCGTGCCTGGTATGACGAGGG
GCAGGTGGGAGGATGGACCCAAGAGTATTCTGGACTTACCTTTGTCACCG
TGAGGGGAGCAGGCCACGAAGTCCCATTGCATAGACCCAAACCTGCTCTC
ACACTAATCAAAAGCTTTCTATCANGAAGGTCAATGCCATGCTTGAAACG
AGTCAGCCACAGTGACTCATGAAGCTTGCATTCTCACTTGA
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