CF836045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL2_ARATH (Squamosa promoter-binding-like protein 2 OS=Arabidopsis thaliana GN=SPL2 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.279e-30 Identity = 72/163 (44.17%), Postives = 99/163 (60.74%), Query Frame = 2 Query: 92 DFTEFEQEAIPNVDA--VDESSSRT----KGNFSVDLKLGQVNSSAED--SLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQP 556 +FT E++P A +D S S G+ + LKLG+ + ED + K G + S K++++ QT C V+GC+ DLS+ +DYHR+H++CE HSK P+V++ G ++RFCQQCSRFHCL EFDE KRSCR+RL HN RRRKP P Sbjct: 84 NFTSETGESLPGEFAKGIDTSPSLELSFGSGDPVLGLKLGK-RTYFEDFWEVENAKGLGLPVTLASSSVSPVKKSKSIPQRLQTPHCQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRSCRRRLSDHNARRRKPNP 245
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSJ (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.589e-30 Identity = 62/122 (50.82%), Postives = 75/122 (61.48%), Query Frame = 2 Query: 242 GASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNYQGAS 607 G+ S G + G C VD C +DL+N +DYHRRHKVCE+H KT + L+ Q QRFCQQCSRFH L EFDEGKRSCR+RL GHNRRRRK QP ++ N + A+ Sbjct: 159 GSPGSASGGGGGGGGGGNSGGGGGSYPMCQVDDCRADLTNAKDYHRRHKVCEIHGKTTKALVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPTDVASQLLLPGNQENAA 280
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSI (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.589e-30 Identity = 62/122 (50.82%), Postives = 75/122 (61.48%), Query Frame = 2 Query: 242 GASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNYQGAS 607 G+ S G + G C VD C +DL+N +DYHRRHKVCE+H KT + L+ Q QRFCQQCSRFH L EFDEGKRSCR+RL GHNRRRRK QP ++ N + A+ Sbjct: 159 GSPGSASGGGGGGGGGGNSGGGGGSYPMCQVDDCRADLTNAKDYHRRHKVCEIHGKTTKALVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPTDVASQLLLPGNQENAA 280
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL6_ARATH (Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana GN=SPL6 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.245e-29 Identity = 58/89 (65.17%), Postives = 70/89 (78.65%), Query Frame = 2 Query: 284 KRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKP 550 K++RA+N SQ C V GC DLS+ +DYH+RH+VCE HSKT V++ G +QRFCQQCSRFH L EFD+GKRSCR+RL GHN RRRKP Sbjct: 110 KKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRKP 198
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL10_ARATH (Squamosa promoter-binding-like protein 10 OS=Arabidopsis thaliana GN=SPL10 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.245e-29 Identity = 69/175 (39.43%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 182 LKLGQVNSSAEDSLNKCKEPGASKMESPSPSG-SFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNYQGASLLPFSSSHMYPSATVVKPTWTGV-VNTEADAR 700 LKLG+ S E + A M +PS + K+ ++ Q C +DGC+ DLS+ +DYHR+H+VCE HSK P+V++ G ++RFCQQCSRFH + EFDE KRSCRKRL HN RRRKPQ + P +S ++ W G+ +NT ++ + Sbjct: 127 LKLGKRTYSEEFWGRNNNDLSAVSMNLLTPSVVARKKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-----------------GVFPLNSERVFDRRQHTSMLWNGLSLNTRSEEK 284
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL12_ORYSJ (Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. japonica GN=SPL12 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.124e-29 Identity = 55/100 (55.00%), Postives = 75/100 (75.00%), Query Frame = 2 Query: 269 PSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLS 568 PS K+ + + +Q++ C V+GC DLS+ R+YHR+HKVCE HSK P+V++ G ++RFCQQCSRFH L EFD+ K+SCR+RL HN RRRKPQ + +S Sbjct: 161 PSTVVKKMKVSQQSTQSSYCQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCRRRLSDHNARRRKPQQEAIS 260
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL12_ORYSI (Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica GN=SPL12 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.124e-29 Identity = 55/100 (55.00%), Postives = 75/100 (75.00%), Query Frame = 2 Query: 269 PSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLS 568 PS K+ + + +Q++ C V+GC DLS+ R+YHR+HKVCE HSK P+V++ G ++RFCQQCSRFH L EFD+ K+SCR+RL HN RRRKPQ + +S Sbjct: 161 PSTVVKKMKVSQQSTQSSYCQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCRRRLSDHNARRRKPQQEAIS 260
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL11_ARATH (Squamosa promoter-binding-like protein 11 OS=Arabidopsis thaliana GN=SPL11 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 8.070e-29 Identity = 67/151 (44.37%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 101 EFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQ 553 +F Q P V +S+ + + LKLG+ S E E A M+ +PS +++ C +DGC+ DLS+ + YHR+HKVCE HSK P+V + G ++RFCQQCSRFH + EFDE KRSCRKRL HN RRRKPQ Sbjct: 104 DFVQVKAPTALEVSVASAES----DLCLKLGKRTYSEEYWGRNNNEISAVSMKLLTPSVVAGKSKLCGQSMPVPRCQIDGCELDLSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQ 250
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL9_ARATH (Squamosa promoter-binding-like protein 9 OS=Arabidopsis thaliana GN=SPL9 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28 Identity = 70/142 (49.30%), Postives = 83/142 (58.45%), Query Frame = 2 Query: 149 SSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGS--QTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLS 568 SS +FS L GQ ED G S S S +R R +G Q C V+GC DL+N + Y+ RH+VC +HSKTP+V + G +QRFCQQCSRFH L EFD KRSCR+RL GHN RRRKPQP LS Sbjct: 21 SSTESSSFSGGLMFGQ-KIYFEDG-------GGGSGSSSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLS 154
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL6_ORYSJ (Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.005e-28 Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 284 KRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPD 559 K+ R +C V+GC +DL+ RDYHRRHKVCE+H+K ++ QRFCQQCSRFH L+EFDEGKRSCR+RL GHNRRRRK +P+ Sbjct: 138 KKIRVQGGSPSGPACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGKRSCRRRLAGHNRRRRKTRPE 229 The following BLAST results are available for this feature:
BLAST of CF836045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836045 ID=CF836045; Name=CF836045; organism=Citrus sinensis; type=EST; length=774bpback to top |