CF836045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL14_ORYSJ (Squamosa promoter-binding-like protein 14 OS=Oryza sativa subsp. japonica GN=SPL14 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.005e-28 Identity = 66/164 (40.24%), Postives = 90/164 (54.88%), Query Frame = 2 Query: 191 GQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNY-QGASLLPFSSSHMYPSA-TVVKPTWTGV 676 G ++SA + K G + G A A C V+GC +DLS ++Y+ RHKVC +HSK P+V++ G +QRFCQQCSRFH L EFD+GKRSCR+RL GHN RRR+PQ SR G ++ + F+ YP + V+ W + Sbjct: 59 GSGSASAAPPSSSSKAAGGGRGGGGKNKGKGVAAAAPPPPPPPPRCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRSCRRRLAGHNERRRRPQTPLASRYGRLAASVGEHRRFRSFTLDFSYPRVPSSVRNAWPAI 222
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SBP1_ANTMA (Squamosa promoter-binding protein 1 OS=Antirrhinum majus GN=SBP1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.005e-28 Identity = 66/137 (48.18%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 149 SSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPD 559 +S+ +G + L Q ED + + + K + +PSG KRA +GS SC V+ C ++++N + YHRRHKVCE H+K P VL G +QRFCQQCSRFH L EFDE KRSCR+RL GHN RRRK D Sbjct: 3 TSKGEGKRVIKLPGSQEQGEEEDDIGE----DSKKTRALTPSG--KRA----SGSTQRSCQVENCAAEMTNAKPYHRRHKVCEFHAKAPVVLHSGLQQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSHD 129
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL15_ARATH (Squamosa promoter-binding-like protein 15 OS=Arabidopsis thaliana GN=SPL15 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.923e-28 Identity = 71/162 (43.83%), Postives = 87/162 (53.70%), Query Frame = 2 Query: 191 GQVNSSAEDSLNKCKEPGASKM------ESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNYQGASLLPFSSSHMYPSATVVK 658 GQ S S G + E S S S R S TA C V+GC DLSN + Y+ RHKVC +HSK+ +V++ G QRFCQQCSRFH L EFD KRSCR+RL HN RRRKPQP T F S+Y + S + P+A ++K Sbjct: 8 GQAESGGSSSTESSSLSGGLRFGQKIYFEDGSGSRSKNRVNTVRKSSTTARCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSRFHQLSEFDLEKRSCRRRLACHNERRRKPQP----TTALFTSHYSRIA----PSLYGNPNAAMIK 161
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL4_ORYSJ (Squamosa promoter-binding-like protein 4 OS=Oryza sativa subsp. japonica GN=SPL4 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.165e-27 Identity = 54/94 (57.45%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 287 RARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLS 568 RA G C V+GC +L +DYHR+H+VCE HSK P+V++ GQ++RFCQQCSRFH L EFD+ KRSCR+RL HN RRRKPQ D S Sbjct: 55 RAEEGGGGGGEVRCQVEGCGVELVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHNARRRKPQTDVFS 148
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL1_ARATH (Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.165e-27 Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 2 Query: 320 ASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPD 559 A C V+ C++DLS +DYHRRHKVCE+HSK + G QRFCQQCSRFH L+EFDEGKRSCR+RL GHN+RRRK P+ Sbjct: 104 AVCQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTNPE 183
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL8_ARATH (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana GN=SPL8 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 9.865e-27 Identity = 55/93 (59.14%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 281 FKRARAANNGS----QTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRK 547 ++R+R +G T C +GC++DLS+ + YHRRHKVCE HSK V+ G QRFCQQCSRFH L EFD GKRSCRKRL HNRRRRK Sbjct: 169 YRRSRPGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRK 261
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL5_ORYSJ (Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica GN=SPL5 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.683e-26 Identity = 54/85 (63.53%), Postives = 62/85 (72.94%), Query Frame = 2 Query: 296 AANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKP 550 AA + Q C +GC +DLS + YHRRHKVC+ H+K VL G++QRFCQQCSRFH L EFDE KRSCRKRL HNRRRRKP Sbjct: 197 AAAHHHQPPRCQAEGCKADLSAAKHYHRRHKVCDFHAKAAAVLAAGKQQRFCQQCSRFHVLAEFDEAKRSCRKRLTEHNRRRRKP 281
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL7_ORYSJ (Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. japonica GN=SPL7 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 8.352e-26 Identity = 50/99 (50.51%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 284 KRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGT 580 ++ +AA C V+GCD L ++YHRRHKVCE+H+K P+V++ G +QRFCQQCSRFH L EFD+ K+SCR+RL GHN RRR+ + G+ Sbjct: 94 RKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKKSCRRRLAGHNERRRRSNASEAMARGS 192
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL7_ORYSI (Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. indica GN=SPL7 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.352e-26 Identity = 50/99 (50.51%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 284 KRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGT 580 ++ +AA C V+GCD L ++YHRRHKVCE+H+K P+V++ G +QRFCQQCSRFH L EFD+ K+SCR+RL GHN RRR+ + G+ Sbjct: 94 RKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKKSCRRRLAGHNERRRRSNASEAMARGS 192
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL1_ORYSJ (Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.352e-26 Identity = 70/175 (40.00%), Postives = 94/175 (53.71%), Query Frame = 2 Query: 65 MDWNLKP-AWDFTEFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVN-----SSAEDSLNKCKEPGASKMESPSPSGSFKRA------RAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQ 553 ++W+L WD F A P+ + + S R G ++ G V+ S +D +C + + SG R+ R S C VDGC +LS+ RDY++RHKVCE+H+K+ V I + RFCQQCSRFH L+EFDEGK+SCR RL HNRRRRK Q Sbjct: 10 LEWDLNDWRWDSNLFL--ATPSNASPSKCSRRELGRAEGEIDFGVVDKRRRVSPEDDDGEECINAATTNGDDGQISGQRGRSSEDEMPRQGTCSSSGPCCQVDGCTVNLSSARDYNKRHKVCEVHTKSGVVRIKNVEHRFCQQCSRFHFLQEFDEGKKSCRSRLAQHNRRRRKVQ 182 The following BLAST results are available for this feature:
BLAST of CF836045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836045 ID=CF836045; Name=CF836045; organism=Citrus sinensis; type=EST; length=774bpback to top |