CF836045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: LG1_MAIZE (Protein LIGULELESS 1 OS=Zea mays GN=LG1 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.234e-25 Identity = 52/84 (61.90%), Postives = 61/84 (72.62%), Query Frame = 2 Query: 308 GSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQ-KQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQP 556 G C +GC +DLS+ + YHRRHKVCE HSK P V+ G QRFCQQCSRFH L+EFD+ K+SCRKRL HNRRRRK +P Sbjct: 179 GHHPPRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFDDAKKSCRKRLADHNRRRRKSKP 262
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL5_ARATH (Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana GN=SPL5 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.515e-22 Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 2 Query: 326 CLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPD 559 C VD C +L+ + Y+RRH+VCE+H+K + G +QRFCQQCSRFH L EFDE KRSCR+RL GHN RRRK D Sbjct: 63 CQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHNERRRKISGD 140
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL7_ARATH (Squamosa promoter-binding-like protein 7 OS=Arabidopsis thaliana GN=SPL7 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.526e-19 Identity = 52/152 (34.21%), Postives = 83/152 (54.61%), Query Frame = 2 Query: 98 TEFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGH-NRRRRKP 550 T E E P+ + S R + D +L + S+ + + C P +++ + + GS A C V C++D+S + YH+RH+VC + V++ G+ +R+CQQC +FH L +FDEGKRSCR++L+ H NRR+RKP Sbjct: 70 TPAESELDPSPEESGSGSDRVRKR---DPRL--ICSNFIEGMLPCSCP---ELDQKLEDAELPKKKRVRGGSGVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKP 213
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL9_ORYSJ (Squamosa promoter-binding-like protein 9 OS=Oryza sativa subsp. japonica GN=SPL9 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.877e-18 Identity = 44/111 (39.64%), Postives = 67/111 (60.36%), Query Frame = 2 Query: 242 GASKMESPSPSGSFKRARAANNGSQTAS-----CLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPD 559 GA K + GS + G+ + C V GC++D+ + YHRRH+VC + V++ G ++R+CQQC +FH L +FDE KRSCR++L+ HN+RRR+ +PD Sbjct: 138 GARKKPKGAGRGSGAAVGGSGGGASRGTPAEMKCQVPGCEADIRELKGYHRRHRVCLRCAHAAAVMLDGVQKRYCQQCGKFHILLDFDEDKRSCRRKLERHNKRRRR-KPD 247 The following BLAST results are available for this feature:
BLAST of CF836045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836045 ID=CF836045; Name=CF836045; organism=Citrus sinensis; type=EST; length=774bpback to top |