CF836062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS15A_SCHPO (40S ribosomal protein S15-A OS=Schizosaccharomyces pombe GN=rps15a PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 8.615e-53 Identity = 99/140 (70.71%), Postives = 116/140 (82.86%), Query Frame = -3 Query: 118 LPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 537 L KKR+F+ F++RGV+L+ LLD+S ++LV LF ARARRR RGL I+K RKAK EAP EKP V THLRNMII+PEM+GS++G+YNGK FNQVEI+PEMIGHYLGEFSI+YKP KHGRPGIGATHSSRFIPLK Sbjct: 14 LRKKRSFRTFAYRGVELEQLLDLSAEQLVDLFHARARRRMLRGLGPNASRFIRKLRKAKTEAPLNEKPATVKTHLRNMIILPEMVGSVVGIYNGKLFNQVEIRPEMIGHYLGEFSITYKPTKHGRPGIGATHSSRFIPLK 153
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS15_CAEEL (40S ribosomal protein S15 OS=Caenorhabditis elegans GN=rps-15 PE=1 SV=3) HSP 1 Score: 205.297 bits (521), Expect = 1.919e-52 Identity = 100/140 (71.43%), Postives = 114/140 (81.43%), Query Frame = -3 Query: 118 LPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 537 L KKRTF+KF +RGVDLD LLDMS ++ KL R RRR RGLKRK +ALI K +KAK+ A EKP V THLR+MII+PE++G +IG+YNGK FNQ EIKPEMIG YLGEF+ISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 12 LKKKRTFRKFMYRGVDLDQLLDMSREQFTKLLPCRMRRRLDRGLKRKHLALIAKVQKAKKAAGVLEKPATVKTHLRDMIILPELVGGVIGIYNGKVFNQTEIKPEMIGFYLGEFAISYKPVKHGRPGIGATHSSRFIPLK 151
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS15_YEAST (40S ribosomal protein S15 OS=Saccharomyces cerevisiae GN=RPS15 PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.171e-47 Identity = 91/138 (65.94%), Postives = 107/138 (77.54%), Query Frame = -3 Query: 118 KKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 531 KKR FK S+RGVDL+ LL+MS ++ VKL AR RRRF RG+ KP +KK R AK AP EKP PV TH+RNMIIVPEMIGS++G+YNGK FNQVEI+PEM+GHYLGEFSI+Y PV+HGR G +SRFIPLK Sbjct: 8 KKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAAPENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGRAG---ATTSRFIPLK 142
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS156_ARATH (40S ribosomal protein S15-6 OS=Arabidopsis thaliana GN=RPS15F PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.332e-45 Identity = 95/144 (65.97%), Postives = 113/144 (78.47%), Query Frame = -3 Query: 118 KKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAP--NGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGA----THSSRFIPLK 531 KKRTFKKFSFRG ++DALL MSN +L KLF+AR RRRF RGLK++P+ LIKK R+AK+EA N KPE V THLRNMIIVPEMIGS++GV+NGK FN++ IKPEMIGHYL EFS++ K V H RP I S+RFIPL+ Sbjct: 17 KKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEASDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKKVNHHRPRICGCCCFRRSTRFIPLR 160
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS15_DICDI (40S ribosomal protein S15 OS=Dictyostelium discoideum GN=rps15 PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.876e-45 Identity = 88/139 (63.31%), Postives = 107/139 (76.98%), Query Frame = -3 Query: 118 KKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPN-GEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 531 KKRTFKKF++ GV L++LLD+ ++L+ L RARR+ +R K + +KK R +K GEKP V TH RN++IVPEMIGS+IG+YNGK FNQVE+KPEMIGHY GEFS+SYK V HGRPGIGATHSSRFIPLK Sbjct: 6 KKRTFKKFTYSGVALESLLDLKEEQLISLLRCRARRKLRRETPIKHVNFLKKCRASKAAVTQVGEKPALVKTHARNILIVPEMIGSVIGIYNGKVFNQVEVKPEMIGHYTGEFSLSYKSVNHGRPGIGATHSSRFIPLK 144
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS15_NAEGR (40S ribosomal protein S15 (Fragment) OS=Naegleria gruberi GN=RPS15 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 9.903e-33 Identity = 67/118 (56.78%), Postives = 87/118 (73.73%), Query Frame = -3 Query: 118 MSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 471 M NDEL LF++ RR +G+ +K LI+K +K + AP GEKP+ V THLR+MII+P MIG +IGVY GK + VEIKPEM+G L +FS++Y+PVKHG+P IGAT SS F+PLK Sbjct: 3 MENDELKNLFTSALRRIIGKGISKKYKTLIEKAQKKRDTAPYGEKPDAVKTHLRDMIILPSMIGCVIGVYQGKDYVSVEIKPEMVGMKLSDFSLTYRPVKHGKPSIGATSSSGFVPLK 120
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_THEGJ (30S ribosomal protein S19P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps19p PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.206e-32 Identity = 69/133 (51.88%), Postives = 94/133 (70.68%), Query Frame = -3 Query: 118 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 516 K+F +RG LD LL+MS +E KL AR RR +RGL + L++K R AK+ G+ +P+ TH R+MI++PEM+G I V+NGK F +EIKPEMIGHYLGEF+++ K V+HG PG+GAT SS F+ +K Sbjct: 5 KEFRYRGYTLDELLNMSLEEFAKLLPARQRRSLKRGLSPEQKKLLRKIRLAKK----GKYNKPIRTHSRDMIVLPEMVGITIHVHNGKEFVPIEIKPEMIGHYLGEFALTRKIVQHGSPGVGATRSSMFVAVK 133
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_PYRFU (30S ribosomal protein S19P OS=Pyrococcus furiosus GN=rps19p PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.206e-32 Identity = 70/133 (52.63%), Postives = 95/133 (71.43%), Query Frame = -3 Query: 118 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 516 K+F +RG L+ L++MS +EL +LF AR RR +RGL + L++K R AK+ G+ +P+ TH R+MII+PEM+G I V+NGK F VEIKPEMIGHYLGEF+ + K V+HG PG+GAT SS F+ +K Sbjct: 4 KEFRYRGYTLEQLMNMSLEELARLFPARQRRSLKRGLTPEQKKLLRKIRLAKK----GKYKKPIRTHCRDMIILPEMVGLTIYVHNGKEFVPVEIKPEMIGHYLGEFAPTRKKVEHGAPGVGATRSSMFVAVK 132
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_PYRKO (30S ribosomal protein S19P OS=Pyrococcus kodakaraensis GN=rps19p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.419e-32 Identity = 69/133 (51.88%), Postives = 93/133 (69.92%), Query Frame = -3 Query: 118 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 516 K+F +RG LD LL+MS +E KL +R RR +RGL + L++K R AK+ G+ +P+ TH R+MI++PEM+G I VYNGK F VEIK EMIGHYLGEF+++ K V+HG PG+GAT SS F+ +K Sbjct: 5 KEFRYRGYTLDELLNMSLEEFAKLLPSRQRRSLKRGLSPEQKKLLRKIRLAKK----GKYNKPIRTHSRDMIVLPEMVGMTIHVYNGKEFVPVEIKEEMIGHYLGEFAMTRKVVQHGSPGVGATRSSMFVAVK 133
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_PYRAB (30S ribosomal protein S19P OS=Pyrococcus abyssi GN=rps19p PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.383e-32 Identity = 70/133 (52.63%), Postives = 94/133 (70.68%), Query Frame = -3 Query: 118 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 516 K+F +RG L+ L++MS +EL KL AR RR +RGL + L++K R AK+ G+ +P+ TH R+MI++PEM+G I V+NGK F VEIKPEMIGHYLGEF+ + K V+HG PGIGAT SS F+ +K Sbjct: 4 KEFRYRGYTLEQLMNMSLEELAKLLPARQRRSLKRGLTPEQKKLLRKIRLAKK----GKYNKPIRTHCRDMIVLPEMVGLTIYVHNGKEFVPVEIKPEMIGHYLGEFAPTRKRVQHGAPGIGATRSSMFVAVK 132 The following BLAST results are available for this feature:
BLAST of CF836062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836062 ID=CF836062; Name=CF836062; organism=Citrus sinensis; type=EST; length=599bpback to top |