CF836062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_CALMQ (30S ribosomal protein S19P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps19p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.645e-27 Identity = 67/134 (50.00%), Postives = 85/134 (63.43%), Query Frame = -3 Query: 118 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 519 +K F +RG D L+ M +E +KL AR RR +RGL+ L++K RKAK A G K PV TH R+MII+PEM+G I VYNG T+ V I P IGHYLGEF+I+ K V+HG PG+ AT S+ I K Sbjct: 55 WKNFKYRGFTFDELMKMPMNEFIKLLPARQRRTLKRGLRPCHRQLLEKIRKAKAFAAKG-KSIPVRTHCRDMIILPEMVGLTIFVYNGITYIPVPISPWHIGHYLGEFAITTKIVQHGEPGLKATKSTLHIAAK 187
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_KORCO (30S ribosomal protein S19P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps19p PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.760e-27 Identity = 62/133 (46.62%), Postives = 89/133 (66.92%), Query Frame = -3 Query: 118 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 516 ++F +RG L+ L M+ DEL + +R RR +RGL + L+ K RK K + + + TH R+M I+PEM+GS I V+NGK F ++ I PEMIGHYLGEF+++ + V+HG+PG GAT SS+F+PLK Sbjct: 4 REFRYRGYTLEQLQTMTLDELANVMPSRIRRTLKRGLSIENKKLLDKIRKYKAMGID----KVIRTHRRDMPILPEMVGSKIAVHNGKEFVEITIVPEMIGHYLGEFAMTNRIVRHGKPGKGATRSSKFVPLK 132
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_HALWD (30S ribosomal protein S19P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps19p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.217e-27 Identity = 62/133 (46.62%), Postives = 88/133 (66.17%), Query Frame = -3 Query: 118 KFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREA-PNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 513 +F++RG LD L MS +++ L AR RR +RGL + +K R+ R+A P +P+ THLR+M I+P + I VYNG++F +V I+PEMIGHYLGEF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 12 EFTYRGHTLDELQAMSLEDITALLPARQRRTIERGLTTEQ----QKLRETVRDADPQKTANDPIRTHLRDMPILPSFVEKTIAVYNGQSFERVRIEPEMIGHYLGEFQLTRTSVEHGQAGIGATRSSKFVPLK 140
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_METST (30S ribosomal protein S19P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps19p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.120e-27 Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = -3 Query: 118 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 516 K F FRG L+ L +MS DE+++L +R RR +RG + ++ K K K + +P + TH R+MI++P M+G G+YNG+ F +V I+PEMIG Y GEF+ + V+HG PG+GAT SS F+PLK Sbjct: 4 KIFKFRGYTLEELQEMSLDEVIELLPSRQRRSLKRGFLPRQEKVLDKMEKVKDMKNDSGRPIVIKTHCRDMIVLPNMVGYTFGIYNGQEFVEVTIQPEMIGCYFGEFAQTRGRVQHGDPGMGATRSSMFVPLK 136
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_THEAC (30S ribosomal protein S19P OS=Thermoplasma acidophilum GN=rps19p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.060e-26 Identity = 61/133 (45.86%), Postives = 87/133 (65.41%), Query Frame = -3 Query: 118 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 516 K+F+++G L+ L MS +EL+K+ ARARR R + L++K + E V TH+R++II+P +G I+ VYNG ++ + EIKPEMIGHYLGEF ++ K VKH PG+GAT SS+F+PLK Sbjct: 28 KEFTYKGYSLEDLQKMSMEELIKILPARARRTLLREPNYEQKKLMEKLESDE---------EDVKTHVRDVIILPNYVGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPLK 151
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_META3 (30S ribosomal protein S19P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps19p PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26 Identity = 58/139 (41.73%), Postives = 88/139 (63.31%), Query Frame = -3 Query: 118 PKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 534 P++R +F ++G L L +M + +++ AR RR ++G+ K L+ K +KA+R A G+ P + TH R+ +I PEMIG G+YNGK F +V++ E IG +LGEF+ S K V+HG PG+GAT S F+P+K Sbjct: 26 PRRRV--EFKYKGFTLGELQEMPIKKFMEIVPARQRRSMKKGITPKQRKLVMKIKKARRLANRGKDPRTIRTHCRDFVITPEMIGLPFGIYNGKEFIEVKLVEEAIGRFLGEFAPSRKVVQHGSPGMGATRGSMFVPIK 162
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_CENSY (30S ribosomal protein S19P OS=Cenarchaeum symbiosum GN=rps19p PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26 Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = -3 Query: 118 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 516 KKF +RG + L M D L +LF++R RR RG+ LI++ + A+ G++ P+ THLR++I++P M G + V++GK F VEI EMIGHYLGE+ I+ K V HG PG+GA+ SS ++PLK Sbjct: 3 KKFEYRGKPAEELESMPLDSLFRLFNSRQRRSLTRGITDGKRKLIREIKDARA----GKEGNPIKTHLRDLIVLPSMTGVTVNVFSGKEFRPVEITTEMIGHYLGEYVITNKRVSHGAPGVGASRSSLYVPLK 131
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_ARCFU (30S ribosomal protein S19P OS=Archaeoglobus fulgidus GN=rps19p PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26 Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = -3 Query: 118 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 516 + F +RG L+ L M +EL KL AR RR+ +RG + L++K RK TH R+M+++PEM+G ++ V+NGK F +VEIKPEMIGH LGEF+++ + KH PG+GAT SS+++PLK Sbjct: 11 RDFKYRGYTLEELQKMPLEELAKLLPARERRKIKRGFTEQEEKLLRKLRKKGTAR----------THCRDMVVLPEMVGKVVFVHNGKEFVRVEIKPEMIGHRLGEFALTRRFEKHSGPGVGATRSSKYVPLK 133
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_NITMS (30S ribosomal protein S19P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps19p PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.977e-26 Identity = 57/133 (42.86%), Postives = 89/133 (66.92%), Query Frame = -3 Query: 118 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 516 K+F++RG+ + L +MS ++L +LF+AR RR RG+ LI++ + AK G+ P+ TH+R++II+P M+ + V++GK F V I+ EMIGHYLGE+ I+ + V HG PG+GA+ SS ++PLK Sbjct: 3 KEFAYRGIPKEELDNMSLEKLFQLFNARQRRSLTRGITDGKRKLIEEIKAAKA----GKLKNPIKTHVRDLIILPYMVDVTVNVFSGKEFRPVTIRTEMIGHYLGEYVITNRKVSHGAPGVGASRSSLYVPLK 131
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS19_METTP (30S ribosomal protein S19P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps19p PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.977e-26 Identity = 60/140 (42.86%), Postives = 92/140 (65.71%), Query Frame = -3 Query: 118 LPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 537 LPK++ ++F++RG + L M +E+ +L +R RR +RGL ++ + K R A+ A THLR+ I++PEM+G ++ ++NGKTF +VEI PEMIGHYLGE++++ V HG G+GAT SS+F+PLK Sbjct: 9 LPKRK--EEFTYRGYRVSELAKMRLEEIAELLPSRQRRTLRRGLSKEHRKFMAKLR-ARGTAK---------THLRDAIVLPEMVGKVVEIHNGKTFQRVEIIPEMIGHYLGEYALTRARVIHGAAGVGATRSSKFVPLK 136 The following BLAST results are available for this feature:
BLAST of CF836062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836062 ID=CF836062; Name=CF836062; organism=Citrus sinensis; type=EST; length=599bpback to top |