CF836063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_COPC7 (40S ribosomal protein S0 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS0 PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.880e-78 Identity = 141/227 (62.11%), Postives = 178/227 (78.41%), Query Frame = 3 Query: 39 TATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATA 716 T+ P LS E DIQ++LAA+ H+GTKNCD QME YV+KRR DGI+I+N+GKTWEKL +AAR+I A+ENP DI V SARPYG RAVLKFA T A AIAGR TPG+FTN + SF EPR++I+TDPR DHQ I+EA+ NIP IA CDTD+P+++VD+ IP NNK +HSIG ++WLLAR VL++RGTI R W+VMVD+FFYR+PE+ ++ ++EE AA A A Sbjct: 2 TSKLPSILSATEEDIQLLLAAQCHIGTKNCDKQMEPYVWKRRADGIHILNIGKTWEKLVLAARIIAAVENPNDICVISARPYGHRAVLKFAANTGAQAIAGRFTPGSFTNYITRSFKEPRIIIVTDPRVDHQAIREASYVNIPVIALCDTDAPLQFVDVAIPTNNKTRHSIGLIWWLLAREVLRLRGTIPRTPDGWNVMVDMFFYRDPEEVEKQQQEEAAAKAAAAA 228
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DIACI (40S ribosomal protein SA OS=Diaphorina citri PE=2 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 8.643e-78 Identity = 141/219 (64.38%), Postives = 173/219 (79.00%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATA 716 LS KE D+ ML A+ H+G++N D+QME+YV+KRRNDG++I+NL +TWEKL +AAR IVAIE+P D+ V S+RP GQRAVLKFA YT A IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EAA NIP IAFC+T+SP+R+VDI IP NNK HSIG ++WLLAR VL+ RGTI KWDV+VDLFFYR+PE +AE+EE A + A A Sbjct: 8 LSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGTIPREPKWDVVVDLFFYRDPE---EAEKEEQAGKESAAA 223
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROYA (40S ribosomal protein SA OS=Drosophila yakuba GN=sta PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 3.284e-77 Identity = 142/213 (66.67%), Postives = 169/213 (79.34%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ I+NLGKTWEKLQ+AAR IVAI+NP DI V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR+PE +AE+EE AA Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPE---EAEKEEAAA 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROTE (40S ribosomal protein SA OS=Drosophila teissieri GN=sta PE=3 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 3.284e-77 Identity = 142/213 (66.67%), Postives = 169/213 (79.34%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ I+NLGKTWEKLQ+AAR IVAI+NP DI V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR+PE +AE+EE AA Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPE---EAEKEEAAA 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROSI (40S ribosomal protein SA OS=Drosophila simulans GN=sta PE=3 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 3.284e-77 Identity = 142/213 (66.67%), Postives = 169/213 (79.34%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ I+NLGKTWEKLQ+AAR IVAI+NP DI V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR+PE +AE+EE AA Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPE---EAEKEEAAA 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROSE (40S ribosomal protein SA OS=Drosophila sechellia GN=sta PE=3 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 3.284e-77 Identity = 142/213 (66.67%), Postives = 169/213 (79.34%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ I+NLGKTWEKLQ+AAR IVAI+NP DI V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR+PE +AE+EE AA Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPE---EAEKEEAAA 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROME (40S ribosomal protein SA OS=Drosophila melanogaster GN=sta PE=1 SV=2) HSP 1 Score: 288.115 bits (736), Expect = 3.284e-77 Identity = 142/213 (66.67%), Postives = 169/213 (79.34%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ I+NLGKTWEKLQ+AAR IVAI+NP DI V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR+PE +AE+EE AA Sbjct: 51 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPE---EAEKEEAAA 260
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROER (40S ribosomal protein SA OS=Drosophila erecta GN=sta PE=3 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 3.284e-77 Identity = 142/213 (66.67%), Postives = 169/213 (79.34%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ I+NLGKTWEKLQ+AAR IVAI+NP DI V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR+PE +AE+EE AA Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPE---EAEKEEAAA 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_NEMVE (40S ribosomal protein SA OS=Nematostella vectensis GN=v1g198553 PE=3 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 4.290e-77 Identity = 138/214 (64.49%), Postives = 169/214 (78.97%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAI 701 L KE D+ LAA VHLG NCDFQME YV+KR++DG+ IIN+ KTWEKL +AAR+IV IENP D+ V SARPYGQRA+LK+A +T A IAGR TPGTFTNQ+Q +F EPRLLI+ DPR DHQP+ EA+ NIP IAFC+TDSP+R+VD+ IP NNKG HSIG +FWLLAR VL+MRG+I W++M DL+FYR+PE +AE+EE AA+ Sbjct: 8 LQLKEEDVVKFLAAGVHLGANNCDFQMEDYVYKRKSDGVNIINVKKTWEKLLLAARIIVTIENPADVCVISARPYGQRAILKYASHTGATPIAGRFTPGTFTNQIQAAFREPRLLIVCDPRIDHQPVTEASYVNIPVIAFCNTDSPLRHVDVAIPCNNKGIHSIGLMFWLLAREVLRMRGSISRALPWEIMPDLYFYRDPE---EAEKEEQAAL 218
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_LACBS (40S ribosomal protein S0 OS=Laccaria bicolor (strain S238N-H82) GN=RPS0 PE=3 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 4.290e-77 Identity = 136/217 (62.67%), Postives = 174/217 (80.18%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 P L+ E +IQ++LAA+ H+GTKNCD QME YV+KRR DGI+I+N+GKTWEKL +AARVI A+ENP D+ V SARPYG RAVLK+A T A AIAGR TPG+FTN + SF EPRL+I+TDPR DHQ I+EA+ NIP IA CDTD+P+++VD+ IP NNK +HSIG ++WLLAR VL++RGTI R W+VMVD+FFYR+PE+ ++ ++EE AA Sbjct: 6 PSVLAATEEEIQLLLAAQCHIGTKNCDKQMEPYVWKRRADGIHILNIGKTWEKLVLAARVIAAVENPNDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRVDHQAIREASYVNIPVIALCDTDAPLKFVDVAIPTNNKTRHSIGLIWWLLAREVLRLRGTIPRTSDGWNVMVDMFFYRDPEEVEKQQQEEAAA 222 The following BLAST results are available for this feature:
BLAST of CF836063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836063 ID=CF836063; Name=CF836063; organism=Citrus sinensis; type=EST; length=735bpback to top |