CF836063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_PLACH (40S ribosomal protein SA OS=Plasmodium chabaudi GN=PC000391.02.0 PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.640e-68 Identity = 126/211 (59.72%), Postives = 158/211 (74.88%), Query Frame = 3 Query: 63 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE--DTKQAEEEE 689 S KE I ML +VH+GTKN + +M+RYV+ R DG++IINL KT+EKLQ+AARVIVA+ NP D++V SARP+G RAVLKFA+YT A AIAGR TPG TNQ+ F EPRLLI+TDPRTD Q +KE+A NIP IA CD+DSP+ +VDI IP NNKGK SI ++WLLA+ VL ++G+I WDVMVD+F +R+PE + K EE Sbjct: 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIVAVSNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFIEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGSIPRSQAWDVMVDMFLWRDPEQFELKNLANEE 218
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_PLAF7 (40S ribosomal protein SA OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0264 PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 6.209e-68 Identity = 126/213 (59.15%), Postives = 157/213 (73.71%), Query Frame = 3 Query: 63 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPED---TKQAEEEET 692 S KE I ML +VH+GTKN + +M+RYV+ R DG++IINL KT+EKLQ+AAR+IVAI NP D++V SARP+G RAVLKFA+YT A AIAGR TPG TNQ+ F EPRLLI+TDPRTD Q +KE+A NIP IA CD+DSP+ +VDI IP NNKGK SI ++WLLA+ VL ++G I W+VMVD+F +R+PE A EE T Sbjct: 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIVAISNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGVIPRSEPWNVMVDMFLWRDPEQFELKNLANEENT 220
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_TOXGO (40S ribosomal protein SA OS=Toxoplasma gondii PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.383e-67 Identity = 130/225 (57.78%), Postives = 165/225 (73.33%), Query Frame = 3 Query: 57 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHK--WDVMVDLFFYREPEDTKQAE--EEETAAIDYATAE 719 +LS +E I ML + H+GTKN + +M YVFK ++GI++INL KTWEK+ MAARVIVAIENP D++V SARPYG RAVLKF++Y A AIAGR TPG TNQ+ F EPRLLI+TDPRTD Q ++E+A N+P IA CDTDSP+ +VDI IP NNKGK SI ++WLLAR VL +RG + P WDVMVD+F +R+PE+ ++ E E+E AA A A+ Sbjct: 8 KLSLQEDSIAKMLICKAHIGTKNVEHKMRPYVFKSTSEGIHLINLAKTWEKILMAARVIVAIENPADVLVISARPYGSRAVLKFSQYVGAQAIAGRWTPGMLTNQITQKFMEPRLLIVTDPRTDAQAVRESAYANVPVIALCDTDSPLEHVDICIPCNNKGKESIALMYWLLAREVLYLRGEL-PSRSVPWDVMVDMFLWRDPEEFERKERLEDEEAAPHTAQAD 231
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_CHLVR (40S ribosomal protein SA OS=Chlorohydra viridissima PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.864e-67 Identity = 129/214 (60.28%), Postives = 159/214 (74.30%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAI 701 LS KE D+ LAA VHLG+ N + YVFKR++DGI+IINL KTWEKL +AAR+I +IENP D+ V S+RPYG RAVLKFA+ T A IAGR TPGTFTNQ+Q F EPRLLI TDP+ D+Q + EA+ NIP IA C+TDSP+R+VD IP NN+G SIG ++W+LAR VL +RG I W+VM DLFFYR+PED + +EE+ AAI Sbjct: 8 LSLKEEDVVKFLAAGVHLGSTNVGSSCQGYVFKRKSDGIHIINLRKTWEKLILAARIIASIENPADVCVISSRPYGTRAVLKFAQSTGAIPIAGRFTPGTFTNQIQKRFREPRLLISTDPQHDNQALTEASYVNIPVIALCNTDSPLRFVDCAIPCNNRGIQSIGTMWWILAREVLHLRGIISRKTPWNVMPDLFFYRDPEDIE--KEEQAAAI 219
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DICDI (40S ribosomal protein SA OS=Dictyostelium discoideum GN=rpsA PE=1 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 5.811e-66 Identity = 127/217 (58.53%), Postives = 158/217 (72.81%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAI 701 P L+ + DI MLA + HLG N D +ME Y +KR+++G +IINL KTWEK+Q+AARVIVAIENP DI V SA+P GQRAVLKFA + A A +GR TPGTFTNQ+Q+ F EPRLLI+ DP D QP+ EA+ NIPTIA CDT S + VDI IP NN+GK+SI +FWLLAR VL +RGTI W V VDLF YR+ ++ + E+E+TAA+ Sbjct: 5 PAALNPHQDDILKMLACQTHLGGNNVDVEMESYTWKRKDNGHFIINLAKTWEKIQLAARVIVAIENPADISVISAKPLGQRAVLKFANFIGATAFSGRFTPGTFTNQIQSKFTEPRLLIVADPLLDKQPLMEASYVNIPTIALCDTTSCLDGVDIAIPCNNRGKNSIALMFWLLAREVLYLRGTIPRNTTWSVKVDLFIYRDTDE--EPEKEKTAAV 219
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_USTMA (40S ribosomal protein S0 OS=Ustilago maydis GN=RPS0 PE=3 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 7.590e-66 Identity = 122/225 (54.22%), Postives = 163/225 (72.44%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYA--TAE 719 P L+ E DI ++LAA+ H+GTKN D QM Y++KRR DGI+++N+GKTWEK+ AAR++ AIENP DI V S R YG RAVLKFA T A AIAGR TPG+FTN + SF EPR++++TDPR DHQ I+EA+ NIP I+F D+DSP+++VD+ IP N +G+HS+G L+WLL R VL+++ G VM D+FFYR+PE+ ++ +E AA A TAE Sbjct: 5 PAALNPTEEDISLLLAAQTHIGTKNADKQMAPYIYKRRADGIHLLNIGKTWEKIVFAARILAAIENPADICVISGRQYGHRAVLKFAAQTGATAIAGRFTPGSFTNYITRSFKEPRVIVVTDPRVDHQAIREASYVNIPCISFVDSDSPLKFVDVAIPGNVRGRHSVGLLWWLLCRTVLRIK-----GGDLSVMPDMFFYRDPEEVEREAQEAAAAAQAAKETAE 224
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_PICPG (40S ribosomal protein S0 OS=Pichia pastoris (strain GS115) GN=RPS0 PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.912e-66 Identity = 121/224 (54.02%), Postives = 157/224 (70.09%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 P D +++LAA VHLG KNC E YV+K R DG+ +IN+GKTWEK+ +AAR+I AI NP D++ S+R +GQRAVLKFA +T+ AIAGR TPG+FTN + F EPRL+I+TDPRTD Q IKE++ NIP IA D DSP +VD+ IP NNKGKHSIG +++LL+R VL++RG + W VM DL+FYR+PE+ +Q EEE A + A E Sbjct: 4 PASFDLTAEDAKLLLAANVHLGAKNCQVHNEPYVYKTRPDGVNVINIGKTWEKIVLAARIIAAIPNPEDVVAVSSRTFGQRAVLKFASHTNGSAIAGRFTPGSFTNYITREFKEPRLIIVTDPRTDSQAIKESSYVNIPIIALTDMDSPSEFVDVAIPCNNKGKHSIGLIWYLLSREVLRLRGVLPNRTEAWSVMPDLYFYRDPEEIEQTAEEEAEAAEGAEFE 227
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_LACTC (40S ribosomal protein S0 OS=Lachancea thermotolerans (strain CBS 6340) GN=RPS0 PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.767e-65 Identity = 122/211 (57.82%), Postives = 157/211 (74.41%), Query Frame = 3 Query: 78 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEDT-KQAEEEETAAID 704 D Q++LAA VHLG+KN E YVFK R DG+ ++N+GKTWEK+ +AAR+I AI NP D++ S+R YGQRAVLKF+ +T A AIAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG +++LLAR VL++RG+ + W +M DL+FYR+PE+ +Q EE TAA D Sbjct: 13 DAQLLLAANVHLGSKNVQVHQEPYVFKTRPDGVNVVNVGKTWEKIVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKESSYVNIPVIALTDLDSPSEYVDVAIPCNNKGKHSIGLIWYLLAREVLRLRGSLVDRTQPWSIMPDLYFYRDPEEVDQQVAEEATAAAD 223
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_MONBE (40S ribosomal protein SA OS=Monosiga brevicollis GN=30792 PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.425e-65 Identity = 115/214 (53.74%), Postives = 158/214 (73.83%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTH-AHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 L EADIQ +L A+VHLG NC M +YV+KRR+DG+ +I+L KT+EK+ +AAR+I A+++P ++ S R +GQRA+LKF + A IAGR TPG FTNQ+Q +F EPRLL+LTDP DHQ ++EA+ NIP I+ CD D+P+RYVD+ IP NNK H+IG ++W+LAR VL++RGT+ +WDVM DL+F+R+PE+ K+ EE AA Sbjct: 8 LKPTEADIQKLLMAKVHLGASNCTTAMSKYVYKRRSDGVNVIDLNKTYEKIVLAARIIAAVDSPANVCAISGRNFGQRAILKFCNHIGGAFPIAGRFTPGAFTNQIQKAFQEPRLLVLTDPLVDHQAVREASYVNIPIISLCDVDAPLRYVDVVIPCNNKSPHAIGIVWWMLAREVLRLRGTLPRDAEWDVMPDLYFFRDPEEIKKEEEAAAAA 221
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_CLAL4 (40S ribosomal protein S0 OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS0 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.441e-64 Identity = 121/217 (55.76%), Postives = 153/217 (70.51%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPEDTKQAEEEETAA 698 P + D +++LAA VHLG+KN E YV+K R DG+ +IN+ KTWEK+ +AAR+I AI N D++V S+R +GQRAVLKFA +T A IAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL++RG I +W VM DL+FYR+PE+ +Q EE A Sbjct: 4 PESFALTAEDAKLLLAANVHLGSKNVQVHNEPYVYKTRPDGVNVINIAKTWEKIVLAARIIAAIPNASDVVVCSSRTFGQRAVLKFASHTGATPIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALSDVDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDREAEWSVMPDLYFYRDPEEIEQNAAEEARA 220 The following BLAST results are available for this feature:
BLAST of CF836063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836063 ID=CF836063; Name=CF836063; organism=Citrus sinensis; type=EST; length=735bpback to top |