CF836063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_CANTR (40S ribosomal protein S0 OS=Candida tropicalis GN=RPS0 PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.699e-63 Identity = 122/217 (56.22%), Postives = 151/217 (69.59%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEDTKQAEEEETAA 698 P D +++LA VHLG+KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I AI N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL+ RG I +W VM DL+FYR+PE+ +Q EE A Sbjct: 4 PASFDLTPEDAKLLLAGNVHLGSKNVQVHNKPYVYKTRPDGVNIINIGKTWEKIVLAARIIAAIPNANDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRSRGIIPDRTTEWSVMPDLYFYRDPEEIEQNAAEEAKA 220
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_CANAW (40S ribosomal protein S0 OS=Candida albicans (strain WO-1) GN=RPS0 PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.699e-63 Identity = 122/223 (54.71%), Postives = 156/223 (69.96%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEDTKQ--AEEEETAAIDYA 710 P D +++LAA VHLG KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+++TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL++RG I +W VM DL+FYR+PE+ +Q EE +T ++ A Sbjct: 4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDRTTEWSVMPDLYFYRDPEEIEQNAVEEAKTEEVEEA 226
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_CANAL (40S ribosomal protein S0 OS=Candida albicans GN=RPS0 PE=2 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 2.699e-63 Identity = 122/223 (54.71%), Postives = 156/223 (69.96%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEDTKQ--AEEEETAAIDYA 710 P D +++LAA VHLG KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I A+ N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+++TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL++RG I +W VM DL+FYR+PE+ +Q EE +T ++ A Sbjct: 4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDRTTEWSVMPDLYFYRDPEEIEQNAVEEAKTEEVEEA 226
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_PICGU (40S ribosomal protein S0 OS=Pichia guilliermondii GN=RPS0 PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 6.014e-63 Identity = 122/219 (55.71%), Postives = 153/219 (69.86%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEDTKQAEEEETAAID 704 P D +++LAA VHLG+KN + YV+K R DG+ +IN+GKTWEK+ +AAR I AI N D+ V S+R +GQRAVLKFA +T A IAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ NIP IA D DSP YVDI IP NNKGKHSIG ++WLLAR VL++RG I +W VM DL+FYR+PE+ +Q E++ A D Sbjct: 4 PASFDLTAEDAKLLLAANVHLGSKNVIVHNKPYVYKTRPDGVNVINIGKTWEKIVLAARTIAAIPNAADVAVCSSRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPTDYVDIAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDRSTEWSVMPDLYFYRDPEEIEQNAAEDSKAED 222
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_ZYGRC (40S ribosomal protein S0 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS0 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.854e-63 Identity = 118/207 (57.00%), Postives = 150/207 (72.46%), Query Frame = 3 Query: 78 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEDTKQAEEEETA 695 D Q++LAA HLG +N E YVFK R DG+ ++++GKTWEKL +AAR+I AI NP DI+ S+R +GQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W VM DL+FYR PE+ +Q EETA Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFKTRPDGVNVVDVGKTWEKLVLAARIIAAIPNPEDIVAISSRTFGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSVMPDLYFYRNPEEIEQQVAEETA 219
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_KLULA (40S ribosomal protein S0 OS=Kluyveromyces lactis GN=RPS0 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.854e-63 Identity = 118/216 (54.63%), Postives = 151/216 (69.91%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEDTKQAEEEETA 695 P D Q++LAA VHLG KN E YV+K R DG+ +IN+GKTWEK+ +AAR+I AI NP D++ S+R YGQRAVLK+A +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKE++ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR PE+ +Q EE A Sbjct: 4 PSTFDLTSEDAQLLLAARVHLGAKNVQVHQEPYVYKARPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVVAISSRTYGQRAVLKYAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKESSYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALPDRTQPWAIMPDLYFYRNPEEIEQQTAEEEA 219
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_ASHGO (40S ribosomal protein S0 OS=Ashbya gossypii GN=RPS0 PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.026e-62 Identity = 117/208 (56.25%), Postives = 153/208 (73.56%), Query Frame = 3 Query: 78 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 D Q++LAA VHLG+KN E Y++K R DG+ II++GKTWEK+ +AAR+I AI N D++ S+R YGQRAVLKF+ +T A AIAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D +SP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR+PE+ +Q EE AA Sbjct: 13 DAQLLLAANVHLGSKNVQVHQEPYLYKTRPDGVNIIHIGKTWEKIVLAARIIAAIPNAEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLESPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDPEEIEQQAAEEAAA 220
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DEBHA (40S ribosomal protein S0 OS=Debaryomyces hansenii GN=RPS0 PE=3 SV=3) HSP 1 Score: 238.424 bits (607), Expect = 2.984e-62 Identity = 118/214 (55.14%), Postives = 151/214 (70.56%), Query Frame = 3 Query: 78 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATA 716 D +++LAA VHLG+KN + YV+K R DG+ +IN+GKTWEK+ +AAR+I AI N D+ V S R +GQRAVLKFA +T A IAGR TPG FTN + SF EPRL+++TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WL+AR VL++RG I +W VM DL+FYR+PE+ +Q E+ D A Sbjct: 13 DAKLLLAANVHLGSKNVQVHNKPYVYKTRPDGVNVINVGKTWEKIVLAARIIAAIPNAADVAVCSTRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDFQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLVAREVLRLRGIIPDRTTEWSVMPDLYFYRDPEEIEQNATEDIKTDDVEEA 226
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAST (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae GN=RPS0A PE=1 SV=3) HSP 1 Score: 238.424 bits (607), Expect = 2.984e-62 Identity = 115/205 (56.10%), Postives = 149/205 (72.68%), Query Frame = 3 Query: 78 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEDTKQAEEEE 689 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR+PE+ +Q EE Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDPEEVEQQVAEE 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAS7 (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS0A PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.984e-62 Identity = 115/205 (56.10%), Postives = 149/205 (72.68%), Query Frame = 3 Query: 78 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEDTKQAEEEE 689 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR+PE+ +Q EE Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDPEEVEQQVAEE 217 The following BLAST results are available for this feature:
BLAST of CF836063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836063 ID=CF836063; Name=CF836063; organism=Citrus sinensis; type=EST; length=735bpback to top |