CF836063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAS1 (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS0A PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.984e-62 Identity = 115/205 (56.10%), Postives = 149/205 (72.68%), Query Frame = 3 Query: 78 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEDTKQAEEEE 689 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR+PE+ +Q EE Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDPEEVEQQVAEE 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_CRYHO (40S ribosomal protein SA OS=Cryptosporidium hominis GN=Chro.30246 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.898e-62 Identity = 113/205 (55.12%), Postives = 150/205 (73.17%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPED 665 P ++K DI M+ + H+GTKN + +M YV+KR ++GI++INL KTWEK+Q+AAR+I I+N D++V S RPYG R LKFA++T AHA+ GR TPGT TNQ+ F EPRLLI+TDPR D Q + E++ NIP IA CDTDSP++YVD+ IP NNKGK SI +++LLAR V +RG KWDVMVD+FF+R+PE+ Sbjct: 2 PPAETRKLDDIAKMIVCKTHIGTKNVEDKMLSYVYKRTHEGIFLINLAKTWEKIQIAARIIATIDNLADVVVVSQRPYGSRPALKFAQHTGAHAMVGRFTPGTLTNQITQKFMEPRLLIVTDPRVDSQAVIESSYANIPVIALCDTDSPLQYVDVAIPCNNKGKESIALMYYLLAREVNFLRGKT---DKWDVMVDVFFWRDPEE 203
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA2_VANPO (40S ribosomal protein S0-B OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0B PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.898e-62 Identity = 120/218 (55.05%), Postives = 152/218 (69.72%), Query Frame = 3 Query: 78 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEDTKQAEEEE---TAAIDYATAE 719 D Q++LAA HLG +N E YVF R DG+ +IN+GKTWEK+ +AAR+I AI NP D+ S+R YGQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR PE+ +Q EE T A + AT E Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGALVDRTQPWAIMPDLYFYRNPEEVEQQAVEEASATGATEEATEE 230
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA1_VANPO (40S ribosomal protein S0-A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS0A PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.898e-62 Identity = 116/208 (55.77%), Postives = 148/208 (71.15%), Query Frame = 3 Query: 78 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 D Q++LAA HLG +N E YVF R DG+ +IN+GKTWEK+ +AAR+I AI NP D+ S+R YGQRAVLKF+ +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR PE+ +Q EET + Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNTRPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYITRSFKEPRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLRLRGALVDRTQPWAIMPDLYFYRNPEEVEQQAAEETTS 220
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_CAEBR (40S ribosomal protein SA OS=Caenorhabditis briggsae GN=rps-0 PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.934e-61 Identity = 115/214 (53.74%), Postives = 158/214 (73.83%), Query Frame = 3 Query: 72 EADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI--RPGHKWD---VMVDLFFYREPEDTKQAEEEETAA 698 E D+ +LA + HLG+ N +FQM++YV+KRR DG IIN+ KTWEKL +AAR I A+ENP D++V SARPY QRA+LKFA +T A AI GR +PG TNQ+Q +F EPRLL+++DPR DHQ + EA+ +P I+F +T+SP++ +DIG+P NNKG+ SIG ++W+LAR +L +RG I + G D +M DL+FYR+P +T E+EET A Sbjct: 12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLDGKEIMPDLYFYRDPTET---EKEETGA 222
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_CAEEL (40S ribosomal protein SA OS=Caenorhabditis elegans GN=rps-0 PE=1 SV=3) HSP 1 Score: 235.343 bits (599), Expect = 2.527e-61 Identity = 116/222 (52.25%), Postives = 161/222 (72.52%), Query Frame = 3 Query: 72 EADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKW-----DVMVDLFFYREPEDTKQAEEEETAA-IDYATAE 719 E D+ +LA + HLG+ N +FQM++YV+KRR DG IIN+ KTWEKL +AAR I A+ENP D++V SARPY QRA+LKFA +T A AI GR +PG TNQ+Q +F EPRLL+++DPR DHQ + EA+ +P I+F +T+SP++ +DIG+P NNKG+ SIG ++W+LAR +L +RG I + ++M DL+FYR+P +T E+EET A D A A+ Sbjct: 12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDPTET---EKEETGAHADVAEAQ 230
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_LEIMA (40S ribosomal protein SA OS=Leishmania major GN=LmjF36.5010 PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.310e-61 Identity = 114/229 (49.78%), Postives = 155/229 (67.69%), Query Frame = 3 Query: 33 SGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 S + + L KE+D Q +LA H+GT+N M++Y++ R +G +II++ WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ YVDI IP NN+G SIG ++WLLAR VL++RGTI W+ VDLFFYR+P + + + AA A AE Sbjct: 2 SAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFYRDPNEAAEEKAAAAAAAPAAEAE 230
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_LEIIN (40S ribosomal protein SA OS=Leishmania infantum GN=LinJ36.5570 PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.310e-61 Identity = 114/220 (51.82%), Postives = 152/220 (69.09%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 L KE+D Q +LA H+GT+N M++Y++ R +G +II+L WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ YVDI IP NN+G SIG ++WLLAR VL++RGTI W+ VDLFFYR+P + + + AA A AE Sbjct: 11 LRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDLHMMWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFYRDPNEAAEEKAAAAAAAPAAEAE 230
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_LEIBR (40S ribosomal protein SA OS=Leishmania braziliensis GN=LbrM35_V2.5370 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 6.223e-60 Identity = 114/220 (51.82%), Postives = 153/220 (69.55%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 L KE+D Q +LA H+GT+N M++Y++ R +G +II++ WEKL +AARVI A+ENP D+ V S+R YG RA+ KF+++ GR PGTFTNQ+Q F +PR+L++TDPRTDHQ I+EA+L NIP IA CDTD+P+ +VDI IP NN+G SIG ++WLLAR VL++RGTI W+ VDLFFYR+P + AEE+ AA AE Sbjct: 11 LRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMLWEKLILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFMQPRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLDFVDIAIPCNNRGIKSIGMMYWLLAREVLRLRGTIVRSVPWEEKVDLFFYRDPNEA--AEEKAAAAAAAPAAE 228
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_SCHJA (40S ribosomal protein SA OS=Schistosoma japonicum GN=SJCHGC06078 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.411e-57 Identity = 107/210 (50.95%), Postives = 143/210 (68.10%), Query Frame = 3 Query: 78 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREP-EDTKQAEEEETAAID 704 D+++MLAA VH+G N +FQM YV R D +II L KTWEK+ ++AR I AI+ D+ +RP+ QRAVLKFA YT A A+AGR TPG FTNQ Q+ F EPRLL+++DP +DHQ + EA+ N+P IA C+TDSP+ VDI IP NNK HSI ++W LAR V ++RG +W V+ DLF YR+P E+ + E+ E A ++ Sbjct: 14 DLRLMLAAHVHVGETNMNFQMSTYVHGRTKDNFHIIKLDKTWEKILLSARAIAAIDTASDVFAIGSRPFSQRAVLKFANYTGATAMAGRFTPGAFTNQKQSCFREPRLLVVSDPLSDHQAVMEASSVNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFLAREVRRIRGEDTRLQQWSVLPDLFLYRDPNEEEQNVEDPEDARLE 223 The following BLAST results are available for this feature:
BLAST of CF836063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836063 ID=CF836063; Name=CF836063; organism=Citrus sinensis; type=EST; length=735bpback to top |