CF836063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_ECHGR (40S ribosomal protein SA OS=Echinococcus granulosus PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.098e-56 Identity = 112/228 (49.12%), Postives = 150/228 (65.79%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE--------PEDTKQAEEEETAAIDYATAE 719 L KE DI++M+AA+VHLG+ N ++QM++YV+ R ++G +II+L KTWEKL +AAR I AIENP D+++ +P QR LKF YT ++ GR TPG FTNQ+Q+ F EPRLLI+ DP+ DHQP++E + NIP I FC+TDSP++ VDIGIP NN K+SI + W+LAR V ++ G DV++DLF RE PE Q E D A AE Sbjct: 8 LELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLLAARAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLLIVCDPKGDHQPVREGSAVNIPVIGFCNTDSPLQCVDIGIPCNN-DKYSIALMLWMLAREVRRIWGLDPRSQPGDVIMDLFLMREHVDEPPEGPEGEAQEPPFEQGKFDAAEAE 234
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_GIALA (40S ribosomal protein SA OS=Giardia lamblia GN=GL50803_7766 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.586e-55 Identity = 103/217 (47.47%), Postives = 146/217 (67.28%), Query Frame = 3 Query: 39 TATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEE 689 T+ A ++ KEAD++ ML A HLG +N D +M+ Y+F R+ DG ++ NL K W K+ AAR++V I++P +I V + RP QRA+LKF KYTHA A GR PG FTN+M ++ EPRLL++ DP D Q I EA+ NIPTI+ C++D+ ++++D+ IP NNK SIG ++WLLAR VL+++G+I +WDV DL F PE+ EE E Sbjct: 6 TSQASKEYQLKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTIDDPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVVDRQAILEASYVNIPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLAREVLRLKGSISRTEEWDVKPDL-FVALPEEIPDEEESE 221
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_STRPU (40S ribosomal protein SA (Fragment) OS=Strongylocentrotus purpuratus PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.217e-47 Identity = 89/149 (59.73%), Postives = 117/149 (78.52%), Query Frame = 3 Query: 270 SARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATA 716 S+RPYGQRAVLKF +T A +AGR+TPGTFTNQ+Q +F EPR+LI+TDPR+DHQP+ EA+ NIP IA C++DSP+R+VDI IP NNK HSIG ++W+L+R VL++RG I W++MVDL+F+R+PE +AE+EE A D A A Sbjct: 1 SSRPYGQRAVLKFGAHTGATPVAGRYTPGTFTNQIQAAFREPRILIVTDPRSDHQPVTEASYVNIPVIALCNSDSPLRHVDIAIPCNNKSIHSIGLMWWMLSREVLRLRGAISRDVTWEIMVDLYFFRDPE---EAEKEEQEARDRAVA 146
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RS2_SULSO (30S ribosomal protein S2P OS=Sulfolobus solfataricus GN=rps2p PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.211e-40 Identity = 88/203 (43.35%), Postives = 133/203 (65.52%), Query Frame = 3 Query: 63 SQKEADIQMM------LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 653 S+K A I+++ L+A VH+GT +C ME +V++ R +G+Y++++ K E+L++AA+ + + P DIIV ++RPY R V KFA+ + A+ GR PGTFTN +++ EP++L+++DPRTD Q IKEAA IP +AF DTD+ + Y+D+ IPANNKG+ S+ L+W LAR +L+ R I P V V F R Sbjct: 27 SEKGAIIELLVPVDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRYD-PQDIIVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILRERRVIPPDGDLAVPVSEFEMR 228
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RS2_METS3 (30S ribosomal protein S2P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps2p PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.153e-40 Identity = 77/182 (42.31%), Postives = 121/182 (66.48%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 605 +S+ ++ LAA +H+GT+ ME+Y+F+ R+DG+Y++++ KT E+++ A+++ + P DI+V + R YGQ V KF + T A I GR PGT TN F EP+++++TDPR+D Q + E+ IP IA CDT++ + +VDI IP NNKG+ +I ++WLLAR +L+ RGTI Sbjct: 1 MSELLIELDNYLAAGLHIGTQQKTSDMEKYIFRVRSDGLYVLDIQKTDERIRQIAKLLARYD-PEDILVVATRQYGQAPVKKFGEVTGAKTIPGRFIPGTLTNPTYAKFIEPKIIVVTDPRSDAQAVLESKQNGIPVIALCDTENLLSFVDIAIPVNNKGRKAIALVYWLLARQILRERGTI 181
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RS2_PYRHO (30S ribosomal protein S2P OS=Pyrococcus horikoshii GN=rps2p PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38 Identity = 77/188 (40.96%), Postives = 120/188 (63.83%), Query Frame = 3 Query: 81 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLF 644 + LAA VH+GT+ M++++++ R DG+Y++++ KT E+L++A + + E P I+ S R YGQ+ V KF + T A AI GR PGT TN +F EP ++I+TDPR DHQ +KEA IP +A DT++ + YVD+ IP NNKG+ ++ ++W+LAR +L RG I ++ + V+ F Sbjct: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFE-PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPEVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPVEEF 195
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_ENTBH (40S ribosomal protein S0 OS=Enterocytozoon bieneusi (strain H348) GN=RPS0 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.925e-38 Identity = 81/203 (39.90%), Postives = 129/203 (63.55%), Query Frame = 3 Query: 84 QMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR-GTIRPGHKWDVMVDLFFYREPEDTKQAEEEE 689 +++LA + HLG M++Y++ R D + + +L KTW+K +AAR + D+ V S + +G++ VLKFA+ T A + GR PG+FTN + EPRL+I++DP D Q I+EAA N PTIAFC+TD ++YVDI IP NN+ +IG F++L+R++ ++ GT P + V+LFFYR+P + ++ +E++ Sbjct: 14 KLLLATQAHLGGVKVTKPMKKYIYGERQDKVSVFDLKKTWDKFILAARAFCGLNYGDDVTVISCKTFGKKPVLKFAETTGAKSYTGRFIPGSFTNTTIRNSCEPRLIIVSDPIVDKQAIEEAAKVNCPTIAFCNTDCDLKYVDIAIPLNNRSPKAIGASFFILSRIIRYIKFGT--PMDQDIKEVELFFYRDPIELEKLQEDQ 214
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RS2_STAMF (30S ribosomal protein S2P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps2p PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 78/177 (44.07%), Postives = 113/177 (63.84%), Query Frame = 3 Query: 81 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 611 ++ LAA VH+GT C ME +V++ RNDG+YI+++ K E++++AA+ + E P I S R YGQ+ V+KF Y GR PGTFTN + EP +++LTDPR D Q +KEAA IP ++ DTD+ Y+D+ IPANNKG+ S+ ++WLLAR +L+ RG + P Sbjct: 28 LEKYLAAGVHIGTHICTKFMEPFVYRVRNDGLYILDVRKIDERIRIAAKFLSRYE-PSKIAAVSVRTYGQKPVVKFCNYVGCKPFTGRFMPGTFTNPSLKWYFEPDIVLLTDPRADSQALKEAAEIGIPIVSLADTDNRTEYIDLIIPANNKGRKSLALIYWLLARQILRERGLLPP 203
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RS2_PYRFU (30S ribosomal protein S2P OS=Pyrococcus furiosus GN=rps2p PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 77/188 (40.96%), Postives = 120/188 (63.83%), Query Frame = 3 Query: 81 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLF 644 + LAA VH+GT+ M++++++ R DG+Y++++ KT E+L++A + + E P I+ S R YGQ+ V KF + T A AI GR PGT TN +F EP +LI+TDPR DHQ ++EA IP +A DT++ + YVD+ IP NNKG+ ++ ++W+LAR +L RG I+ + + V+ F Sbjct: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLAKFE-PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVLIVTDPRADHQAMREAVEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIQSREDFKIPVEEF 195
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RS2_PYRAB (30S ribosomal protein S2P OS=Pyrococcus abyssi GN=rps2p PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.142e-37 Identity = 76/188 (40.43%), Postives = 120/188 (63.83%), Query Frame = 3 Query: 81 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLF 644 + LAA VH+GT+ M++++++ R DG+Y++++ KT E+L++A + + + P I+ S R YGQ+ V KF + T A AI GR PGT TN +F EP ++I+TDPR DHQ +KEA IP +A DT++ + YVD+ IP NNKG+ ++ ++W+LAR +L RG I ++ + V+ F Sbjct: 9 LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPVEEF 195 The following BLAST results are available for this feature:
BLAST of CF836063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836063 ID=CF836063; Name=CF836063; organism=Citrus sinensis; type=EST; length=735bpback to top |