CF836063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_PINFU (40S ribosomal protein SA OS=Pinctada fucata PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 7.317e-77 Identity = 137/215 (63.72%), Postives = 166/215 (77.21%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAID 704 L+ KE DI LA HLG N DFQME+YV+KR+ DG+YIINL +TWEKL +AAR I AIENP D+ V SARPYGQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ NIP IA C+TDSP+RYVD+ IP NNK HS+G ++WLLAR VL++RGTI H W+VMVDL+FYR+PE +AE+EE ++ Sbjct: 8 LALKEEDITKFLACSTHLGATNVDFQMEQYVYKRKPDGVYIINLRRTWEKLLLAARAIAAIENPADVCVISARPYGQRAVLKFASATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRIDHQPVTEASYVNIPVIALCNTDSPLRYVDVAIPCNNKSVHSVGLMWWLLAREVLRLRGTISRDHPWEVMVDLYFYRDPE---EAEKEEQTVVE 219
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_XENLA (40S ribosomal protein SA OS=Xenopus laevis GN=rpsa PE=1 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 1.630e-76 Identity = 140/220 (63.64%), Postives = 170/220 (77.27%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA + A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQPI EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+PE + E+EE AA + AT + Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPITEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPE---EIEKEEQAAAEKATTK 224
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROAN (40S ribosomal protein SA OS=Drosophila ananassae GN=sta PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.129e-76 Identity = 141/213 (66.20%), Postives = 168/213 (78.87%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKLQ+AAR IVAI+N D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR+PE +AE+EE AA Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAIVAIDNASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPE---EAEKEEAAA 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_XENTR (40S ribosomal protein SA OS=Xenopus tropicalis GN=rpsa PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 2.780e-76 Identity = 139/220 (63.18%), Postives = 170/220 (77.27%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA + A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+PE + E+EE AA + AT + Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPE---EIEKEEQAAAEKATTK 224
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROVI (40S ribosomal protein SA OS=Drosophila virilis GN=sta PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 3.631e-76 Identity = 142/213 (66.67%), Postives = 167/213 (78.40%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YVFKRR DG+ IINLGKTWEKL +AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR+PE +AE+EE AA Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLRLRGTISRTTEWPVVVDLFFYRDPE---EAEKEEAAA 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROMO (40S ribosomal protein SA OS=Drosophila mojavensis GN=sta PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 3.631e-76 Identity = 142/213 (66.67%), Postives = 167/213 (78.40%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YVFKRR DG+ IINLGKTWEKL +AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR+PE +AE+EE AA Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLRLRGTISRTTEWPVVVDLFFYRDPE---EAEKEEAAA 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROGR (40S ribosomal protein SA OS=Drosophila grimshawi GN=sta PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 3.631e-76 Identity = 142/213 (66.67%), Postives = 167/213 (78.40%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YVFKRR DG+ IINLGKTWEKL +AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDLFFYR+PE +AE+EE AA Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLRLRGTISRTTEWPVVVDLFFYRDPE---EAEKEEAAA 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROPS (40S ribosomal protein SA OS=Drosophila pseudoobscura pseudoobscura GN=sta PE=3 SV=2) HSP 1 Score: 284.263 bits (726), Expect = 4.743e-76 Identity = 141/213 (66.20%), Postives = 168/213 (78.87%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKLQ+AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDL+FYR+PE +AE+EE AA Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRTVEWPVVVDLYFYRDPE---EAEKEEAAA 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_DROPE (40S ribosomal protein SA OS=Drosophila persimilis GN=sta PE=3 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 4.743e-76 Identity = 141/213 (66.20%), Postives = 168/213 (78.87%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAA 698 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKLQ+AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RGTI +W V+VDL+FYR+PE +AE+EE AA Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRTVEWPVVVDLYFYRDPE---EAEKEEAAA 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_TAEGU (40S ribosomal protein SA OS=Taeniopygia guttata GN=RPSA PE=2 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 6.194e-76 Identity = 139/220 (63.18%), Postives = 169/220 (76.82%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+PE + E+EE AA + A + Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPE---EIEKEEQAAAEKAVTK 224 The following BLAST results are available for this feature:
BLAST of CF836063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836063 ID=CF836063; Name=CF836063; organism=Citrus sinensis; type=EST; length=735bpback to top |