CF836063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_CERAE (40S ribosomal protein SA OS=Cercopithecus aethiops GN=RPSA PE=2 SV=3) HSP 1 Score: 283.108 bits (723), Expect = 1.057e-75 Identity = 138/220 (62.73%), Postives = 169/220 (76.82%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+PE + E+EE AA + A + Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPE---EIEKEEQAAAEKAVTK 224
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_BOVIN (40S ribosomal protein SA OS=Bos taurus GN=RPSA PE=2 SV=4) HSP 1 Score: 283.108 bits (723), Expect = 1.057e-75 Identity = 138/220 (62.73%), Postives = 169/220 (76.82%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+PE + E+EE AA + A + Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPE---EIEKEEQAAAEKAVTK 224
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_TRIAD (40S ribosomal protein SA OS=Trichoplax adhaerens GN=TRIADDRAFT_49917 PE=3 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.380e-75 Identity = 131/204 (64.22%), Postives = 165/204 (80.88%), Query Frame = 3 Query: 78 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEE 689 D+ MLAA HLGT N D+QME+YVF+RR DG++II+L +TWEKL +AAR+I +IENP D+ V SARPYGQRAVLKFAK+T A IAGR TPGTFTNQ+Q ++ EPRLLI+TDPR DHQPI EA+ NIP IAFC+TDS +RY+D+GIP NNKG H+IG ++WLLAR VL++RGTI W+ M DLFFYR+PE+ ++ E+ + Sbjct: 14 DVSKMLAASAHLGTTNVDYQMEQYVFRRRTDGVHIIDLRQTWEKLLIAARIIASIENPADVCVLSARPYGQRAVLKFAKFTGASPIAGRFTPGTFTNQIQKAYREPRLLIVTDPRVDHQPITEASYVNIPVIAFCNTDSRLRYIDVGIPCNNKGAHAIGLMWWLLAREVLRLRGTISRDTDWEHMPDLFFYRDPEEVEKEEQAQ 217
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_SOLSE (40S ribosomal protein SA OS=Solea senegalensis GN=rpsa PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.354e-75 Identity = 138/220 (62.73%), Postives = 166/220 (75.45%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 L KE D+ LAA HLG N DFQM+ YV+KR++DG+YIINL KTWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A GR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H WDVM DL+FYR+PE + E+EE AA + A + Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMDHYVYKRKSDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQIQAAFREPRLLLVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWDVMPDLYFYRDPE---EIEKEEQAAAEKAVGK 224
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_SPAAU (40S ribosomal protein SA OS=Sparus aurata GN=rpsa PE=2 SV=2) HSP 1 Score: 281.567 bits (719), Expect = 3.074e-75 Identity = 138/220 (62.73%), Postives = 167/220 (75.91%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 L KE D+ LAA HLG N DFQM++YV+KR++DG+YIINL KTWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A GR TPGTFTNQ+Q +F EPRLLI+TDPR DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR+PE + E+EE AA + A + Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMDQYVYKRKSDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPE---EIEKEEQAAAEKAVGK 224
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_CRIGR (40S ribosomal protein SA OS=Cricetulus griseus GN=Rpsa PE=1 SV=3) HSP 1 Score: 280.796 bits (717), Expect = 5.244e-75 Identity = 137/220 (62.27%), Postives = 168/220 (76.36%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR V +MRGTI H W+VM DL+FYR+PE + E+EE AA + A + Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVRRMRGTISREHPWEVMPDLYFYRDPE---EIEKEEQAAAEKAVTK 224
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_TRIGR (40S ribosomal protein SA OS=Tripneustes gratilla PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 8.944e-75 Identity = 134/219 (61.19%), Postives = 171/219 (78.08%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATA 716 L+ KE D+Q LA+ H+G+ N D+QM +YV+KR+ DG YIINL +TWEKL MAAR+IVAIENP D+ V S+RPYGQRAVLKF +T A IAGR+TPGTFTNQ+Q +F EPR+LI+TDPR+DHQP+ EA+ NIP IA C+TDSP+RYVDI IP NNK HSIG ++W+L+R VL++RG I W++M DL+F+R+PE +AE+EE A D ATA Sbjct: 8 LALKEDDVQKFLASGAHIGSSNLDYQMTQYVYKRKPDGTYIINLRRTWEKLLMAARIIVAIENPADVCVISSRPYGQRAVLKFGAHTGATPIAGRYTPGTFTNQIQAAFREPRILIVTDPRSDHQPVTEASYVNIPVIALCNTDSPLRYVDIAIPCNNKSIHSIGLMWWMLSREVLRLRGAISRDVTWEIMCDLYFFRDPE---EAEKEEQEARDRATA 223
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_SALSA (40S ribosomal protein SA OS=Salmo salar GN=rpsa PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.168e-74 Identity = 137/220 (62.27%), Postives = 165/220 (75.00%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDTKQAEEEETAAIDYATAE 719 L KE D+ LAA HLG N DFQME Y +KR++DG+YIINL KTWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A GR TPGTFTNQ+Q +F EPRLLI+TDPR DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+L+R VL+MRGTI H W+VM DL+FYR+PE + E+EE AA + A + Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNMDFQMEHYTYKRKSDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIAMCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLSREVLRMRGTISREHPWEVMPDLYFYRDPE---EIEKEEQAAAEKAVGK 224
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_URECA (40S ribosomal protein SA OS=Urechis caupo PE=2 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.602e-74 Identity = 137/214 (64.02%), Postives = 165/214 (77.10%), Query Frame = 3 Query: 60 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEDT-KQAEEEETAA 698 L+ KE D+ LA HLG N DFQME+YV+KRR DG IIN+ KTWEK+ +AAR I AIENP DI V SARPYGQRAVLKFA YT A IAGR TPGTFTNQ+QT+F EPRLL++TDP TDHQP+ EA+ NIP IA +TDSP++YVDI IP NNK HS+G ++W+LAR VL++RGTI W+VMVDLFFYR+PE+ K+A+ E+ AA Sbjct: 8 LALKEEDVTKFLACASHLGANNVDFQMEQYVYKRRPDGTSIINVRKTWEKVLLAARAIAAIENPADICVISARPYGQRAVLKFAHYTGATPIAGRFTPGTFTNQIQTAFREPRLLVVTDPYTDHQPVTEASYVNIPVIALTNTDSPLKYVDIAIPCNNKSIHSVGLMWWMLAREVLRLRGTISREVPWEVMVDLFFYRDPEEAEKEAQAEQAAA 221
BLAST of CF836063 vs. ExPASy Swiss-Prot
Match: RSSA_CRYNE (40S ribosomal protein S0 OS=Cryptococcus neoformans GN=RPS0 PE=3 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 7.572e-74 Identity = 133/220 (60.45%), Postives = 168/220 (76.36%), Query Frame = 3 Query: 51 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG----HKWDVMVDLFFYREPEDTKQAEEEETAA 698 P+ L E DIQ++LAA+ HLGTKNCD ME YV+KRR DGI++IN+GKTWEKL +AARV+ IENP D+ V SARPYG RAVLK+ +T A AIAGR TPG+FTN + SF EPR++I+TDPR DHQ I+EAA NIP IAFCDTD+ ++VDI IPANNK +HSIG +++LL R VL++RGT+ G WDV+ DLFFYR+PE+ ++ E+ AA Sbjct: 7 PKALQATEDDIQLLLAAQCHLGTKNCDKSMENYVWKRRADGIHVINVGKTWEKLVLAARVLATIENPNDVCVISARPYGHRAVLKYGSFTGAQAIAGRFTPGSFTNYITRSFKEPRVIIVTDPRVDHQAIREAAYVNIPVIAFCDTDASTKFVDIAIPANNKSRHSIGLMWYLLCREVLRLRGTVPRGPTGPSGWDVLPDLFFYRDPEEIEREAAEKAAA 226 The following BLAST results are available for this feature:
BLAST of CF836063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836063 ID=CF836063; Name=CF836063; organism=Citrus sinensis; type=EST; length=735bpback to top |