CF836067
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836067 vs. ExPASy Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.266e-21 Identity = 47/134 (35.07%), Postives = 81/134 (60.45%), Query Frame = 2 Query: 5 KGAFNNVRTNMSSFSKLSTSSIYGENDSDQLRRGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 406 +G + + +N+++ ++ + L +GPWT EED +I+ + ++ W L+AK+ R GK CR RW N+L P+VK+ + T +E I + H GNRW++IA+ LPGRTDN +KN+W + ++++ Sbjct: 51 QGEWKTIASNLNNRTEQQCQHRWLRVLHPDLVKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLR-GRMGKQCRERWHNHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRK 183
BLAST of CF836067 vs. ExPASy Swiss-Prot
Match: MYB_DROME (Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.071e-20 Identity = 43/105 (40.95%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 92 QLRRGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 406 +L +GPWT +ED ++I+ + +W L+A+ R GK CR RW N+L P++K+ T +E I + H + GN+W+KIA+ LPGRTDN IKN+W + ++++ Sbjct: 133 ELIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRK 236
BLAST of CF836067 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.317e-20 Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 101 RGPWTLEEDTLLIQYISRHSEGRWNLLAKRSG--LKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLK 421 R W EED +L+ Y+ ++ W+L+++R L R KSC RW NYL+P +K+G+LT EQ ++ L +K GN+W KIA +PGRT + +W +KQ R L+ Sbjct: 9 RQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELR 117
BLAST of CF836067 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.547e-19 Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 101 RGPWTLEEDTLLIQYISRHSEGRWNLLAKRSG--LKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLK 421 R W EED +L Y+ ++ W+L+++R L R KSC RW NYL+P +K+G+LT +EQ ++ L +K GN+W KIA +PGRT + +W +KQ R L+ Sbjct: 4 RQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELR 112
BLAST of CF836067 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.547e-19 Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 2 Query: 101 RGPWTLEEDTLLIQYISRHSEGRWNLLAKRSG--LKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLK 421 R W+ EED LL Y+ + W+L+++R L R KSC RW NYLKP +K+G+LT +EQ ++ L K GN+W KIA +PGRT + +W +KQ R K Sbjct: 4 RQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEK 112
BLAST of CF836067 vs. ExPASy Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.639e-19 Identity = 37/105 (35.24%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 92 QLRRGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 406 +L +GPW+ EED +I + ++ +W+ +++ R GK CR RW N+L P + + T +E+++++ H +GN+W+++ + LPGR+DN IKN+W + V+K+ Sbjct: 84 ELVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLP-GRIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKK 187
BLAST of CF836067 vs. ExPASy Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.879e-19 Identity = 48/130 (36.92%), Postives = 73/130 (56.15%), Query Frame = 2 Query: 47 SKLSTSSIYGENDSDQLRRGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARHLKIDANS 436 S L S + ++ +G WT EED L + H RW +A L R G+ CR RW N L P +KR T +E IL+ HSK+GN+W++I++ LPGRT+ IKN+W + ++++ + D +S Sbjct: 739 SGLKKSGRSKSSSNESKAKGHWTKEEDEKLRSLVDLHGTKRWKYIASLLCL-RNGRQCRERWSNQLDPSIKRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNSTMKRKLSKKQYDFSS 867
BLAST of CF836067 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.678e-19 Identity = 43/117 (36.75%), Postives = 71/117 (60.68%), Query Frame = 2 Query: 56 STSSIYGENDSDQLRRGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 406 +TS G+ S + +GPW EED L++ +++ W+ +A + R GK CR RW N+L P+V++ N TP+E I++ H+ GN+W+ I++ L GR N IKN+W + + K+ Sbjct: 262 TTSKDNGKPSSPGIVKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIP-GRIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKK 377
BLAST of CF836067 vs. ExPASy Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.500e-18 Identity = 40/102 (39.22%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 101 RGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQ 406 +GPW+ EED L + + ++ W +++K S R+GKSCRLRW N L P V+ + +E +I H+++GN+W+ IA+ L GRTDN +KN+W + ++++ Sbjct: 6 KGPWSPEEDEQLRRLVVKYGPRNWTVISK-SIPGRSGKSCRLRWCNQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106
BLAST of CF836067 vs. ExPASy Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.891e-17 Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 2 Query: 95 LRRGPWTLEEDTLLIQYISRHSEGRWNLLAKRSGLK-RTGKSCRLRWLNYLKPDVKRGNLTPQEQMSILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRT---RVQKQARHLKIDA 430 L +G WT +ED +I+ + + +W+ +A LK R GK CR RW N+L P++K+ + +E I + H+ GN+W++IA+ LPGRTDN IKN+W + RV HLK A Sbjct: 199 LVKGAWTKDEDDKVIELVKTYGPKKWSDIALH--LKGRMGKQCRERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKRVSNNNVHLKSHA 312 The following BLAST results are available for this feature:
BLAST of CF836067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836067 ID=CF836067; Name=CF836067; organism=Citrus sinensis; type=EST; length=780bpback to top |