CF836072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_METNO (ATP synthase gamma chain OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=atpG PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.334e-26 Identity = 77/186 (41.40%), Postives = 107/186 (57.53%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K K + +G+K IL R+ + I +I L + + +++L E FD + YS+F SV++ +PT + +++ E + + D+ YE E E GEIL L + + A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL Sbjct: 114 KTVKIICVGKKGYDILRREFRDQIVELIELRGVRQLGFENAEAVTENLLNRFEAGEFDIATLFYSRFRSVIAQVPT-----AQQIIPAEISPASESAQTDAAYEYEPEE--GEILAALLPKNLTVQILRALLENAASEQGARMSAMDSATRNAGEMIKKQTLVYNRTRQAMITKELIEIISGAEAL 292
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_MESSB (ATP synthase gamma chain OS=Mesorhizobium sp. (strain BNC1) GN=atpG PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.334e-26 Identity = 73/185 (39.46%), Postives = 110/185 (59.46%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 ++ K + +G+K +L RD K + I + + + +A ++ + EFD +IYS+F SV+S +PT ++ + + E ES G + E YE + G IL +L + +F A+LENA E GA+M+AMD+++RNAGEM+++LT+TYNR RQA IT ELIEIISGA AL Sbjct: 113 RQVKIITVGKKGYDLLRRDFGKLVIDRIELREVKQIGFANADAIAKKVIGLFEAGEFDVCTLIYSRFKSVISQIPTEQQIIPAAVPQAEGESTGAIYE---YEPDAGA----ILADLIPRNIAVQIFRALLENAAGEMGAKMTAMDNATRNAGEMINKLTITYNRQRQAQITKELIEIISGAEAL 290
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_BOVIN (ATP synthase subunit gamma, mitochondrial OS=Bos taurus GN=ATP5C1 PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.275e-26 Identity = 70/184 (38.04%), Postives = 114/184 (61.96%), Query Frame = -1 Query: 194 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASALE 742 KE K + +G+K ++IL R + E+ + P + SV+A ++L + EFD II+++F SV+S+ + S + + AES ++D+ ++L+N E+ + +++ ++ E+ SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+ Sbjct: 126 KEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTIS-SAESMSIYDDIDA----------DVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_HUMAN (ATP synthase subunit gamma, mitochondrial OS=Homo sapiens GN=ATP5C1 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.971e-26 Identity = 72/184 (39.13%), Postives = 111/184 (60.33%), Query Frame = -1 Query: 194 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASALE 742 KE V +G+K + IL R + E+ + P + SV+A ++L + EFD II++KF SV+S+ + S V A+S ++D+ ++LQN E+ + +++ ++ E+ SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+ Sbjct: 126 KEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIFSLNTVA-SADSMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_MACFA (ATP synthase subunit gamma, mitochondrial OS=Macaca fascicularis GN=ATP5C1 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.881e-26 Identity = 70/184 (38.04%), Postives = 112/184 (60.87%), Query Frame = -1 Query: 194 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASALE 742 KE V +G+K + IL R + E+ + P + SV+A ++L + EFD +I+++F SV+S+ + S + AES ++D+ ++LQN E+ + +++ ++ E++ SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+ Sbjct: 126 KEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSVIFNRFRSVISYKTEEKPIFSLNTIA-SAESMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKESSTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_ROSDO (ATP synthase gamma chain OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpG PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.620e-26 Identity = 76/201 (37.81%), Postives = 118/201 (58.71%), Query Frame = -1 Query: 197 KISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 784 K++++ + G K+ K + +G+K + L RD + +TE+++ ++Y +A D+L EFD I Y+KF +VVS +PT ++ + ++E E L + + E IL +L + +F+A+LEN SEQGARMSAMD+++RNAGEM++ LT+ +NR+RQA IT ELIEIISGA AL Sbjct: 100 KLARAHAQKLQGEGKDVKILTVGKKGRDQLKRDLGSLFIGHVDLTEIKR--VSYVDAQGIAKDVLNRFDVGEFDVATIFYAKFVNVVSQIPTAQQIIPAKFEQQEGEEASTLFDYEPDE-------EAILADLLPRGVATQIFSALLENGASEQGARMSAMDNATRNAGEMIENLTIEFNRSRQAVITNELIEIISGAEAL 291
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_PONAB (ATP synthase subunit gamma, mitochondrial OS=Pongo abelii GN=ATP5C1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.620e-26 Identity = 72/183 (39.34%), Postives = 110/183 (60.11%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 KE V +G+K + IL R + E+ + P + SV+A ++L + EFD II++KF SV+S+ + S V A+S ++D+ ++LQN E+ + +++ ++ E+ SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL Sbjct: 126 KEVMLVGVGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIFSLNTVA-SADSMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_SILPO (ATP synthase gamma chain OS=Silicibacter pomeroyi GN=atpG PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.475e-25 Identity = 77/185 (41.62%), Postives = 108/185 (58.38%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K K + +G+K + + RD ++ + L Y +A D+L EFD I Y+KF +VV+ LPT ++ P E E ES E+ ++ E E IL +L + +F+A+LEN SEQGARMSAMD+++RNAGEM+D+LT+ +NR+RQA IT ELIEIISGA AL Sbjct: 114 KTVKILTVGKKGRDAMKRDFAANMVGHVDLSGIKALGYANAQDIARDVLGRFDAGEFDVATIFYAKFQNVVTQLPTAQQII-PAAFEAEGESD----EVALFDYEPSEEA--ILADLLPRGVATQIFSALLENGASEQGARMSAMDNATRNAGEMIDKLTIEFNRSRQAVITNELIEIISGAEAL 291
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_RHILW (ATP synthase gamma chain OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=atpG PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.515e-25 Identity = 72/182 (39.56%), Postives = 102/182 (56.04%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K+ ++ E A I+ R +D++ I E N Q+ D+ EFD + YS+F SV+S +PT ++ +AE G + YE + IL++L S +F A+LEN E GA+MSAMD+++RNAGEM+++LTL+YNR RQA IT ELIEIISGA AL Sbjct: 123 KKGYDILRREYASLIIERKELRDVKRIGFE------NADQIGKRIIDMYAAGEFDVCTLFYSEFKSVISQIPTAQQLIPASTGAVQAEDAAHAGAVYEYEPD----PASILEDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISGAEAL 294
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_RAT (ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus GN=Atp5c1 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.515e-25 Identity = 71/184 (38.59%), Postives = 112/184 (60.87%), Query Frame = -1 Query: 194 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASALE 742 KE V +GEK K+IL R + ++ + P + SV+A ++L + EFD II+++F SV+S+ + S V AE+ ++D+ ++LQN E+ + +++ ++ E+ SEQ ARM+AMD++S+NA +M+D+LTLT+NRTRQA IT ELIEIISGA+AL+ Sbjct: 101 KEVMIVGIGEKIKSILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNQFKSVISYKTEEKPIFSFSTVVA-AENMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAALD 273 The following BLAST results are available for this feature:
BLAST of CF836072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836072 ID=CF836072; Name=CF836072; organism=Citrus sinensis; type=EST; length=787bpback to top |