CF836072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_RHIME (ATP synthase gamma chain OS=Rhizobium meliloti GN=atpG PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.285e-25 Identity = 75/185 (40.54%), Postives = 104/185 (56.22%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K K + +G+K +L RD I + + E++K N ++ ++ EFD + YS+F SV+S +PT ++ E A G + YE E G IL +L S +F A+LEN E GA+MSAMD+++RNAGEM+D+LTL+YNR RQA IT ELIEIISGA AL Sbjct: 114 KTVKIICVGKKGFDMLRRDFASLIIDRVDLREVKKIGFENADRIGHKVIELFDKGEFDVCTLFYSEFKSVISQIPTAQQLIPASAGEVAAAEGEGASAIYEYEPEAGA----ILSDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMIDKLTLSYNRQRQAQITKELIEIISGAEAL 294
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_PARL1 (ATP synthase gamma chain OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=atpG PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.291e-25 Identity = 80/188 (42.55%), Postives = 105/188 (55.85%), Query Frame = -1 Query: 197 GPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQ---VSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 751 G K K + +G K + L RD I + + Q +S D+ + EFD I YSKF +VVS +PT A L P V +A LG YE E E GEIL+++ S +F A+LEN E GA+MSAMD+++RNAG+M+ +L +TYNR+RQA IT ELIEIISGA AL Sbjct: 111 GEGKTVKILTVGRKGRDALKRDHASRIVKSYEFTGIRHIGFEQAEDISRTVIDLFEAGEFDVATIFYSKFVNVVSQIPT-AQQLIPASVPADAGGSVDLGGA-VYEYEPDE--GEILKDILPRNLSVQIFRALLENVAGEFGAKMSAMDNATRNAGDMIKKLNITYNRSRQAMITKELIEIISGAEAL 294
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_DINSH (ATP synthase gamma chain OS=Dinoroseobacter shibae (strain DFL 12) GN=atpG PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.291e-25 Identity = 75/185 (40.54%), Postives = 109/185 (58.92%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K K + +G+K + L RD K + + ++Y + +A D+L EFD I +++F SV+S +PT ++ P E +A++ L Y+ E E IL +L + +F A+LEN SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA IT ELIEIISGA AL Sbjct: 114 KTVKILTVGKKGREQLKRDLSKHFIGHVDLSEVKRVSYDNAADIAADVLGRFDAGEFDVATIFFNRFQSVISQIPTAQQII-PASFEGDADADATL-----YDYEPSEEA--ILADLLPRGVATQIFAALLENGASEQGARMSAMDNATRNAGDMIERLTIEYNRSRQAVITNELIEIISGAEAL 290
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_ACICJ (ATP synthase gamma chain OS=Acidiphilium cryptum (strain JF-5) GN=atpG PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.291e-25 Identity = 67/185 (36.22%), Postives = 109/185 (58.92%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K+ + +G K + RD ++ I + K + + +A+ I+ + +FD +++++F SV+S +P+ ++ + ++ G YEIE + G +L L + +++A+LE+A EQGARM+AMD+++RNAGEM++RLTL YNRTRQA+IT ELIEIISGA AL Sbjct: 114 KQVRLFTVGRKGRDFFRRDMREKIIGEANFVGKKTIEFADAEAIANQIIAAFNDGKFDVCTLMFNRFVSVMSQVPSETPLIPASAGQAANDNAGSDQPAGDYEIEPDD--GTLLDRLLPRNLAVQIYSALLESAAGEQGARMTAMDNATRNAGEMINRLTLNYNRTRQANITKELIEIISGAEAL 296
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_MOUSE (ATP synthase subunit gamma, mitochondrial OS=Mus musculus GN=Atp5c1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.604e-25 Identity = 70/184 (38.04%), Postives = 111/184 (60.33%), Query Frame = -1 Query: 194 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASALE 742 KE V +GEK K IL R + ++ + P + SV+A ++L + EFD II+++F SV+S+ + S + AE+ ++D+ ++LQN E+ + +++ ++ E+ SEQ ARM+AMD++S+NA +M+D+LTLT+NRTRQA IT ELIEIISGA+AL+ Sbjct: 126 KEVMIVGVGEKIKGILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNQFKSVISYKTEEKPIFSLNTIAT-AETMSIYDDIDA----------DVLQNYQEYNLANLIYYSLKESTTSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_RHILO (ATP synthase gamma chain OS=Rhizobium loti GN=atpG PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.319e-25 Identity = 72/185 (38.92%), Postives = 103/185 (55.68%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K+ K + +G+K IL RD I + + L + +A ++ FD + YS+F SV+S +PT ++ + A + + YE E GEIL +L S +F A+LENA E GA+MSAMD+++RNAGEM+++L++TYNR RQA IT ELIEIISGA AL Sbjct: 114 KQVKIICVGKKGFDILRRDYASMILDRVDLREVKTLGFVNADAIAKKVIHLFNEGAFDICTLFYSQFKSVISQVPTAQQIIPAGVASAPAAAVDGGNAVYEYEPE----PGEILSDLIPRNISVQVFRALLENAAGEMGAKMSAMDNATRNAGEMINKLSITYNRQRQAQITKELIEIISGAEAL 294
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_SILST (ATP synthase gamma chain OS=Silicibacter sp. (strain TM1040) GN=atpG PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.559e-25 Identity = 76/187 (40.64%), Postives = 109/187 (58.29%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K K + +G+K + +L R+ + +TE+++ + Y +A DIL EFD I YSKF +VV+ +PT ++ E +AE + YE ++ IL +L + +F +LEN SEQGARMSAMD+++RNAGEM+D+LT+ YNR+RQA IT ELIEIISGA AL Sbjct: 114 KTVKILTVGKKGRDVLKREFGDLFVGHVDLTEVKR--VGYVDAQGIAKDILARFDAGEFDVATIFYSKFQNVVTQIPTAQQIIPAEF---DAEGAEATSGVVDYE----PSEEAILADLLPRGVATQIFAGLLENGASEQGARMSAMDNATRNAGEMIDKLTIEYNRSRQAVITNELIEIISGAEAL 291
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_RHOS5 (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpG PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.248e-24 Identity = 74/185 (40.00%), Postives = 109/185 (58.92%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K K + +G+K + L RD + + + + Y +A D+L EFD I +++F SV+S +PT V+ P + E E G++ L YE ++ +L +L + +F A+LEN SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL Sbjct: 114 KTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDVLDRFDKGEFDVATIFFARFQSVISQIPTAQQVI-PAVFEGE----GEVNSLYDYE----PSEEGVLADLLPRGVATQIFTALLENGASEQGARMSAMDNATRNAGDMINRLTIQYNRSRQAAITKELIEIISGAEAL 289
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_RHIE6 (ATP synthase gamma chain OS=Rhizobium etli (strain CIAT 652) GN=atpG PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.248e-24 Identity = 71/182 (39.01%), Postives = 103/182 (56.59%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K+ ++ E A I+ R ++++ I E N Q+ ++ + EFD + YS+F SV+S +PT ++ + E AE G + YE + IL +L S +F A+LEN E GA+MSAMD+++RNAGEM+++LTL+YNR RQA IT ELIEIISGA AL Sbjct: 123 KKGYDILRREFASLIVERKELREVKKIGFE------NADQIGKRIIEMFEAGEFDVCTLFYSEFKSVISQVPTAQQLIPAKAPEAVAEDADHAGAVYEYEPD----PAAILDDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISGAEAL 294
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_RHIL3 (ATP synthase gamma chain OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=atpG PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.630e-24 Identity = 70/182 (38.46%), Postives = 102/182 (56.04%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K+ ++ E A I+ R +D++ + E N Q+ ++ EFD + YS+F SV+S +PT ++ +AE G + YE + IL++L S +F A+LEN E GA+MSAMD+++RNAGEM+++LTL+YNR RQA IT ELIEIISGA AL Sbjct: 123 KKGYDILRREFASLIIERKELRDVKRVGFE------NADQIGKRIIEMYAAGEFDVCTLFYSEFKSVISQIPTAQRLIPASAEAVQAEDAEHAGAVYEYEPD----PASILEDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISGAEAL 294 The following BLAST results are available for this feature:
BLAST of CF836072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836072 ID=CF836072; Name=CF836072; organism=Citrus sinensis; type=EST; length=787bpback to top |