CF836072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_ACISJ (ATP synthase gamma chain OS=Acidovorax sp. (strain JS42) GN=atpG PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.105e-12 Identity = 49/142 (34.51%), Postives = 79/142 (55.63%), Query Frame = -1 Query: 197 VSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 622 V VL D + + +A+ + Y+KF + + + +L + +A+ G G YE + E+L E +++ AV EN SEQ ARM AM +++ NAG +++ L L YN+TRQA+IT EL EI++GA+A+ Sbjct: 153 VKVLLDAYAEG-KINAVYLSYTKFINTMKQESVVEQLLPLSSEQMQAQKTGH-GWDYIYEPDAQSVIDELLVRYVE----SLIYQAVAENMASEQSARMVAMKAATDNAGNVINELKLVYNKTRQAAITKELSEIVAGAAAV 288
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS9 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9902) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 58/208 (27.88%), Postives = 104/208 (50.00%), Query Frame = -1 Query: 191 KYVILGEKAKAILVRDSKKD--IELIITELQKNPLNYTQVSVLADDILKNVEF-----DALRIIYSKFHSVVSFLPTMATVLS---PELVEREAESGGKLGELDSYEIEGG-----------------ETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASALEG 733 K V++G KA + S +D I+ IT L++ P + + +A D+L EF D + ++++KF ++VS P + T+L ++ + E E + +E G ++ ++L L + + E+A SE +RM+AM+++S NA E+ LTL YN+ RQA+IT E++E++ G++A G Sbjct: 116 KLVVIGSKAISYF---SNRDYPIQAKITGLEQVP-TADEANTIATDML--AEFMAAGTDRVEMVFTKFINLVSCKPVLQTLLPLDPQDIADPEDEIFNLTTDQGRLTVEPGTSSANTAPKIPSDIVFEQSPDQLLNALLPLYLQNQLLRCLQESAASELASRMTAMNNASDNAKELAKTLTLDYNKARQAAITQEILEVVGGSAAAGG 317
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_SODGM (ATP synthase gamma chain OS=Sodalis glossinidius (strain morsitans) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 59/192 (30.73%), Postives = 94/192 (48.96%), Query Frame = -1 Query: 197 SGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPL-----NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 754 +G E + ++G KA + K + + T + NP+ +V + A D D L I+ +KF + +S +P + +L E E+ K+ D YE + +L+ E Q ++ V+EN SEQ ARM AM +++ N G ++ L L YN+ RQ SIT EL EI+SGA+A+ Sbjct: 107 NGKGVETELALIGSKAVSFFNSVGSKVVAQV-TGMGDNPMLSELIGPVKVMLQAYD---EGRLDKLYIVSNKFVNTMSQVPQILQILPLPPAE---EADLKIKSWDYLYEPDPKTLLDTLLRRYVESQ----VYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQTSITQELTEIVSGAAAV 287
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_SHESR (ATP synthase gamma chain OS=Shewanella sp. (strain MR-7) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = -1 Query: 197 DILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 604 D + D L ++++KF + ++ P + +L P + E + + YE + +L E Q ++ V+EN SEQ ARM AM +++ NAG ++D L L YN+ RQA+IT EL EI+SGASA+ Sbjct: 158 DAYNEGKLDRLYVVFNKFVNTMTQTPVIEQLL-PLPKSEDDEVAHRWDYI--YEPDPKALLDTLLVRYVESQ----VYQGVVENIASEQAARMVAMKAATDNAGTLIDDLQLVYNKARQAAITQELSEIVSGASAV 286
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_SHESM (ATP synthase gamma chain OS=Shewanella sp. (strain MR-4) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = -1 Query: 197 DILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 604 D + D L ++++KF + ++ P + +L P + E + + YE + +L E Q ++ V+EN SEQ ARM AM +++ NAG ++D L L YN+ RQA+IT EL EI+SGASA+ Sbjct: 158 DAYNEGKLDRLYVVFNKFVNTMTQTPVIEQLL-PLPKSEDDEVAHRWDYI--YEPDPKALLDTLLVRYVESQ----VYQGVVENIASEQAARMVAMKAATDNAGTLIDDLQLVYNKARQAAITQELSEIVSGASAV 286
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_SHESA (ATP synthase gamma chain OS=Shewanella sp. (strain ANA-3) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = -1 Query: 197 DILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 604 D + D L ++++KF + ++ P + +L P + E + + YE + +L E Q ++ V+EN SEQ ARM AM +++ NAG ++D L L YN+ RQA+IT EL EI+SGASA+ Sbjct: 158 DAYNEGKLDRLYVVFNKFVNTMTQTPVIEQLL-PLPKSEDDEVAHRWDYI--YEPDPKALLDTLLVRYVESQ----VYQGVVENIASEQAARMVAMKAATDNAGTLIDDLQLVYNKARQAAITQELSEIVSGASAV 286
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_RUBXD (ATP synthase gamma chain OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = -1 Query: 197 ILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 601 + + E D + ++Y++F + P + +L E GG + I +T IL+ L +++ A+LE+A E GARM+AM +++ NA E++D LTL N+ RQA IT E+ EI +GA AL Sbjct: 156 LFEREEADEVYLVYNRFVNPAVQRPVVVRLLPAAPEGGEEGEGGTVSGAPFDFIPDADT---ILRRLIPQYVETLVWQALLESAAGEHGARMTAMKNATDNANELVDTLTLQMNKARQAQITREISEIAAGAEAL 287
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_PSEF5 (ATP synthase gamma chain OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 56/179 (31.28%), Postives = 93/179 (51.96%), Query Frame = -1 Query: 197 ILGEKAKAILVRDSKKDIELIITELQKNP-LN--YTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 724 ++G K A R+ ++ I+ L + P +N V V+ D L+ D L ++ +KF + ++ PT+ +L+ EA +L Y E E+L L ++ AV+EN +EQ ARM AM +++ NAG+++ L L YN+ RQA+IT E+ EI+ GA+A+ Sbjct: 117 VVGSKGAAFF-RNFGGNVVAAISHLGEEPSINDLIGSVKVMLDAYLEG-RIDRLSVVSNKFINTMTQQPTVE-----QLIPLEATPDQELKHHWDYLYEPDAK--ELLDGLMVRYVESQVYQAVVENNAAEQAARMIAMKNATDNAGDLISDLQLIYNKARQAAITQEISEIVGGAAAV 286
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_NITSB (ATP synthase gamma chain OS=Nitratiruptor sp. (strain SB155-2) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 41/129 (31.78%), Postives = 76/129 (58.91%), Query Frame = -1 Query: 194 DALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASALE 580 D + +I++ + ++++ +L ++ + E G + E++ E E ++L++L M+ A++++ +E ARM AMD+++ NA EM+ LT++YN+ RQ SIT ELIEIISG A++ Sbjct: 172 DKVILIHNGYKNMITQEMKAIQLLPIDISKYTEEVDGSMLEMEPDESE------KVLESLLNKYIEFNMYYALIDSLAAEHSARMQAMDAATNNAKEMVRSLTISYNKARQESITTELIEIISGMEAMK 294
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_GEOSW (ATP synthase gamma chain OS=Geobacillus sp. (strain WCH70) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 57/199 (28.64%), Postives = 104/199 (52.26%), Query Frame = -1 Query: 194 ISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNP--LNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLS-PELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASALE 781 + +++ + + PD E +++G + + + I L IT L P + +++ A + + FD L + Y+ + S + T +L +LV+ + + +YE E + EIL L +++ A+L+ SE ARM+AM +++ NA E++ LTL+YNR RQA+IT E+ EI++GA+AL+ Sbjct: 99 VYQTIQQRHQSPD-EYAIIVIGRVGLSFFKKRNFPVI-LNITGLPDQPSFADIKEIANKAVGLFADGTFDELYMYYNHYVSAIQQEVTERKLLPLTDLVDNKQRT--------TYEFEPSQE--EILDVLLPQYAESLIYGALLDAKASEHAARMTAMKNATDNAHELIRTLTLSYNRARQAAITQEITEIVAGANALQ 285 The following BLAST results are available for this feature:
BLAST of CF836072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836072 ID=CF836072; Name=CF836072; organism=Citrus sinensis; type=EST; length=787bpback to top |