CF836072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_FRATN (ATP synthase gamma chain OS=Francisella tularensis subsp. novicida (strain U112) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 50/136 (36.76%), Postives = 71/136 (52.21%), Query Frame = -1 Query: 197 EFDALRIIYSKFHSVVSFLPTMATVL------SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 586 E D L + ++F S + P + T+L S E ++ E K G D E E+L L + A+LENA EQ ARM AM +++ NA +++D+L L YN+ RQA IT EL EI SGA+A+ Sbjct: 167 EIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIFSAEEIKANKEKATK-GHWDYIYERDIE---EVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_FRATM (ATP synthase gamma chain OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 50/136 (36.76%), Postives = 71/136 (52.21%), Query Frame = -1 Query: 197 EFDALRIIYSKFHSVVSFLPTMATVL------SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 586 E D L + ++F S + P + T+L S E ++ E K G D E E+L L + A+LENA EQ ARM AM +++ NA +++D+L L YN+ RQA IT EL EI SGA+A+ Sbjct: 167 EIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIFSAEEIKANKEKATK-GHWDYIYERDIE---EVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_FRATH (ATP synthase gamma chain OS=Francisella tularensis subsp. holarctica (strain LVS) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 50/136 (36.76%), Postives = 71/136 (52.21%), Query Frame = -1 Query: 197 EFDALRIIYSKFHSVVSFLPTMATVL------SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 586 E D L + ++F S + P + T+L S E ++ E K G D E E+L L + A+LENA EQ ARM AM +++ NA +++D+L L YN+ RQA IT EL EI SGA+A+ Sbjct: 167 EIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIFSAEEIKANKEKATK-GHWDYIYERDIE---EVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_FRATF (ATP synthase gamma chain OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=atpG PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 50/136 (36.76%), Postives = 71/136 (52.21%), Query Frame = -1 Query: 197 EFDALRIIYSKFHSVVSFLPTMATVL------SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 586 E D L + ++F S + P + T+L S E ++ E K G D E E+L L + A+LENA EQ ARM AM +++ NA +++D+L L YN+ RQA IT EL EI SGA+A+ Sbjct: 167 EIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIFSAEEIKANKEKATK-GHWDYIYERDIE---EVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_FRAT1 (ATP synthase gamma chain OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 51/137 (37.23%), Postives = 72/137 (52.55%), Query Frame = -1 Query: 197 EFDALRIIYSKFHSVVSFLPTMATVL------SPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 586 E D L + ++F S + P + T+L S E ++ E K G D YE + E + E Q A+LENA EQ ARM AM +++ NA +++D+L L YN+ RQA IT EL EI SGA+A+ Sbjct: 167 EIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIFSAEEIKANKEKATK-GHWDYIYERDIEEVLNALFIRYIEAQVR----GAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_CHLAD (ATP synthase gamma chain OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 48/142 (33.80%), Postives = 78/142 (54.93%), Query Frame = -1 Query: 197 VSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 622 V++ A ++ ++D L IIYS+F + + P + +L E + + +YE + IL E Q ++ AVLE+ SE ARM AM +++ NA +++ LTL++N+ RQA+IT E+ EI SGA+AL Sbjct: 155 VAISAISGFQSGKYDELYIIYSEFINTLVQRPAIKQLLPVE----SPDISTTINVDYTYEPSEEDVLNSILPRYVETQ----IYQAVLESIASEHSARMVAMRNATNNAKDLVRDLTLSFNKARQAAITKEVSEIASGAAAL 288
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_BURXL (ATP synthase gamma chain OS=Burkholderia xenovorans (strain LB400) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 47/140 (33.57%), Postives = 75/140 (53.57%), Query Frame = -1 Query: 197 DILKNVEFDALRIIYSKFHSVVSFLPTMATVL--SPELVEREAESGGKLGELDSY--EIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 604 D+ + A+ + Y++F + + P + +L S + ER+ E G Y E + E+L E +++ AV EN SEQ ARM AM ++S NA +++ L L YN++RQA+IT EL EI+ GA+A+ Sbjct: 159 DLYSEGKVSAVYLAYTRFVNTMKQEPVIEQLLPLSADQFERKEEDGTTPSTQWDYIYEPDAQAVVDELLVRYVE----ALVYQAVAENMASEQSARMVAMKAASDNAKTVINELQLVYNKSRQAAITKELSEIVGGAAAV 294
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_BURS3 (ATP synthase gamma chain OS=Burkholderia sp. (strain 383) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = -1 Query: 197 DILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 604 D+ + A+ I Y++F + + + +L EA+ G D YE + E+L E +++ AV EN SEQ ARM AM ++S NA ++ L L YN++RQA+IT EL EI+ GA+A+ Sbjct: 159 DLYSEGKLSAVYIAYTRFVNTMKQEAVIEQLLPLSSEHFEADDGTPATSWDYIYEPDAQAVVDELLVRYVE----ALVYQAVAENMASEQSARMVAMKAASDNAKTVISELQLVYNKSRQAAITKELSEIVGGAAAV 291
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_BURCM (ATP synthase gamma chain OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = -1 Query: 197 DILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 604 D+ + A+ I Y++F + + + +L EA+ G D YE + E+L E +++ AV EN SEQ ARM AM ++S NA ++ L L YN++RQA+IT EL EI+ GA+A+ Sbjct: 159 DLYSEGKLSAVYIAYTRFVNTMKQEAVIEQLLPLSSEHFEADDGTPATSWDYIYEPDAQAVVDELLVRYVE----ALVYQAVAENMASEQSARMVAMKAASDNAKTVISELQLVYNKSRQAAITKELSEIVGGAAAV 291
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_BURA4 (ATP synthase gamma chain OS=Burkholderia ambifaria (strain MC40-6) GN=atpG PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = -1 Query: 197 DILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 604 D+ + A+ I Y++F + + + +L EA+ G D YE + E+L E +++ AV EN SEQ ARM AM ++S NA ++ L L YN++RQA+IT EL EI+ GA+A+ Sbjct: 159 DLYSEGKLSAVYIAYTRFVNTMKQEAVIEQLLPLSSEHFEADDGTPATSWDYIYEPDAQAVVDELLVRYVE----ALVYQAVAENMASEQSARMVAMKAASDNAKTVISELQLVYNKSRQAAITKELSEIVGGAAAV 291 The following BLAST results are available for this feature:
BLAST of CF836072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836072 ID=CF836072; Name=CF836072; organism=Citrus sinensis; type=EST; length=787bpback to top |