CF836073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_RHORT (ATP synthase gamma chain OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=atpG PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.310e-12 Identity = 48/135 (35.56%), Postives = 74/135 (54.81%), Query Frame = 1 Query: 265 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA-------------KKNV--IVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI 624 S + +R+R+ SVK+ QKIT AMKMVAAS+LR Q AE +R Q +LG+ A K NV IV +++++GLCGG N + ++ +++L + K K + +G+K + L R+ K I Sbjct: 3 SLKDLRSRITSVKSTQKITSAMKMVAASRLRRAQDTAEAARPYTQRMERMLGNLAASTAGMAGASPLLGGTGKDNVHLIVALTANRGLCGGFNGSIIRATRTLVRELEAQGKTVKLLCIGKKGRDGLKREFPKQI 137
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_PELUB (ATP synthase gamma chain OS=Pelagibacter ubique GN=atpG PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.310e-12 Identity = 49/160 (30.63%), Postives = 79/160 (49.38%), Query Frame = 1 Query: 277 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILKNVE 711 ++ R+ SVK+ QKITKAMKMVAA+KLR Q AE R + ++ + + T + K ++ + ++SD+GLCGG N+ +K +K+ + S K K + +G K L R K I I+ ++Y + I++N E Sbjct: 7 LKKRIASVKSTQKITKAMKMVAAAKLRRAQENAEKGRPYSEKMNNIILNLSSGISDKENAPKLLSGTGEDKVHLCIVLTSDRGLCGGFNTNIIKKAKTYFQKISDEGKTLKIITVGSKGYDQLKRVYKDAIVERISFKDSKTINYLDAEKVGKMIIENFE 166
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_NOVAD (ATP synthase gamma chain OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=atpG PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.310e-12 Identity = 48/161 (29.81%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 265 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTP---------------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIEL-IITELQKNPLHYTQVSVLADDIL 699 S + ++ R+ SVK+ QKITKA +MVAA+KLR Q AE +R ++G T +++++V +++DKGLCGG+NS +K +K + K + ++G+K +A + RD I T L + P + + + +A ++L Sbjct: 3 SLKELKGRINSVKSTQKITKAKQMVAAAKLRKAQAAAEAARPYASRLAEVMGSLAAKVAGQDNGPLLMRGTGSNQRHLLVVVNTDKGLCGGLNSNIIKEAKLQARALEAAGKTVTFYLVGKKGRAPIRRDYPNGIAAGYDTSLVRTP-GFDEAAAIAQELL 162
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_EHRCR (ATP synthase gamma chain OS=Ehrlichia chaffeensis (strain Arkansas) GN=atpG PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.310e-12 Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 286 RMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVD-------AKKN--VIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKA 588 R+KSVK+IQK TK M+M++A+KL +Q K EN++ ++++ P+ AKK ++V +SSD+GLCG N+ VK +KS + +KE K + G+KA Sbjct: 10 RIKSVKSIQKTTKVMQMISAAKLHRVQQKLENAKKHLLELSSIVDYVPSDGVHNCASIAKKERVLLVVMSSDRGLCGNFNNLIVKFTKSYVEKLESSNKEVKLIFFGKKA 119
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_PHEZH (ATP synthase gamma chain OS=Phenylobacterium zucineum (strain HLK1) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.241e-12 Identity = 53/173 (30.64%), Postives = 90/173 (52.02%), Query Frame = 1 Query: 265 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD--------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIIT-ELQKNP--LHYTQVSVLADDILKNVEIDALRII 732 S + +RNR+ SVK QKITKAM+MVAA+KLR Q A+N+R Q +++ + T +++++V +SD+GL GG NS V+ ++ S K+ + + +G KA+ L R + + L+ T E NP +VS ++ + E+D + ++ Sbjct: 3 SLKEMRNRIGSVKATQKITKAMQMVAAAKLRKAQDAAQNARPYAQRMASVIANLAAGVSGDGAPKLLAGTGSDRRHLVVVATSDRGLAGGFNSAIVRAARERINALSAEGKDVRVITIGRKARDQLRRLAGE--RLVATYEAGSNPSLAVAEEVSARIQEMFEAGEVDVVHLV 173
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_METPB (ATP synthase gamma chain OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=atpG PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11 Identity = 50/164 (30.49%), Postives = 79/164 (48.17%), Query Frame = 1 Query: 265 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILKNVE 711 S + +RNR+ SVK QKITKAM+MVAA+KLR Q AEN R + ++L + + T + +++V + D+GL G NS+ ++++ K K + +G+K +L R + I P+ Y + +ADDIL E Sbjct: 3 SLKDLRNRITSVKATQKITKAMQMVAAAKLRRAQNAAENGRPYAEKMASVLANLAGNLIGGVGAPRLLSGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMAEGKTVKIMTVGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFE 166
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_AZOC5 (ATP synthase gamma chain OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpG PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11 Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 265 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLG----------DTP-----TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEK 585 S + +RNR+ SVK QKITKAM+MVAA+KLR Q+ AE +R + ++LG DTP T +K++++ +S++GLCG N+ V+ + L G K+ K+ +G K Sbjct: 3 SLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQMAAEAARPYAERMDSVLGNIASGVTLSADTPLLLSGTGKDEKHLLLVCTSERGLCGAFNTNIVRAVRERANLLIGQGKDVKFFCVGRK 124
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_JANSC (ATP synthase gamma chain OS=Jannaschia sp. (strain CCS1) GN=atpG PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11 Identity = 48/162 (29.63%), Postives = 81/162 (50.00%), Query Frame = 1 Query: 277 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKK---------------NVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILKNVEID 717 ++NR+ SVK+ +KITKAM+MVAA+KLR Q AE +R + A++ + +++V +++++GLCGG NST V+ ++ + G K K + +G+K + L RD + + L Y + +A D+L E D Sbjct: 7 LKNRIASVKSTRKITKAMQMVAAAKLRRAQEAAEMARPYAEKMEAVMSGLASAVGNSEGAPRLLAGNGKDQVHLLVVMTAERGLCGGFNSTIVRKARVHAQKLLGEGKTIKILTVGKKGREQLRRDYADHLIGHVDLSDVKRLGYADAASIATDVLNRFEED 168
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_HALOH (ATP synthase gamma chain OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=atpG PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11 Identity = 43/118 (36.44%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 277 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDT----------PTVDAKKN---VIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAK 591 ++ R+ S+KN QKITKAMKMVAA+KL+ Q+KAEN+R ++ ++L D P + K+N + V I++D+GLCG N+ ++ + KL D+ N ++ +G K + Sbjct: 7 IKRRINSIKNTQKITKAMKMVAAAKLKKAQLKAENARPFFEKTRSILIDVARRTRQKDIHPLLREKENNRSLFVMITADRGLCGAYNA---RVIDRVKKLTEKEDEVN-FLAVGRKGR 120
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_DROME (ATP synthase subunit gamma, mitochondrial OS=Drosophila melanogaster GN=ATPsyn-gamma PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11 Identity = 47/149 (31.54%), Postives = 87/149 (58.39%), Query Frame = 1 Query: 271 QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQ--VKAENSRGLW-QPFTALLGDTPTVDAK-KNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKEN-KYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILK 702 +++ R+KSVKNIQKIT++MKMV+A+K + +KA G+ Q F P A+ K +++ ++SD+GLCG +++ ++ + D+ N K +G+K++AIL R K+I ++ E+ + P + S +A+++L+ Sbjct: 30 KMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQQFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRG----ELAQDEANTKVFCVGDKSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQ 174 The following BLAST results are available for this feature:
BLAST of CF836073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836073 ID=CF836073; Name=CF836073; organism=Citrus sinensis; type=EST; length=734bpback to top |