CF836089

Overview
NameCF836089
Unique NameCF836089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:920..1715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836089 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.965e-29
Identity = 81/235 (34.47%), Postives = 131/235 (55.74%), Query Frame = 3
Query:   54 LLFSWILVVALNYFS-RGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGT-AIHIGQAAFDTTLNLISNTIFSIDL--ADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRM 746
            +L + +L + L  FS R  +S + RLPPGP P+P+IGNL  +G KPH++L+ +   +GPI+ L+ G V  VV +S ++A++ L+  D +F +R          ++   + + P    WR LRKI + H FS++ L+  +H+R++++  L    +E  R GT  +++GQ      +N +   +    L  AD   K A EF+     MM  AG  N+ DF P L+ LDLQG+  +M
Sbjct:    8 ILLATVLFLILRIFSHRRNRSHNNRLPPGPNPWPIIGNLPHMGTKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGTL---TRELVRVGTKPVNLGQLVNMCVVNALGREMIGRRLFGADADHK-ADEFRSMVTEMMALAGVFNIGDFVPSLDWLDLQGVAGKM 238          
BLAST of CF836089 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.086e-27
Identity = 73/251 (29.08%), Postives = 135/251 (53.78%), Query Frame = 3
Query:   66 WILVVALNYFS-----RGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAH--GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL--DLQGIRRRMTVYFGKMLDVFDRLI 791
            W ++VA  +FS     R  +   + LPPGP   P+IGNL +LG KPH+S+ KL++ +GP+MSLKFG V+TVV S+    KE+L+  D   C+R  P+  Y     ++   + + P +  WR +RK+     ++++++ + QH R++++  L+ ++++       +++ +     + ++I    F I+L    SK    +++   G +E  G    +D+FPV+  +   + G+  +    F  M   FD+ I
Sbjct:    4 WYIIVAFVFFSSMIIVRIIRKTKKNLPPGPPRLPIIGNLHQLGSKPHRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSR--PNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRKEEVAALVDFIKQAASLEKPVNLNKKLMKLSGSVICRVAFGINLQG--SKLENTYEEVIQGTVELVGSFAAADYFPVVGRIIDRITGLHSKCEKLFKAMDAFFDQSI 250          
BLAST of CF836089 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.558e-27
Identity = 73/252 (28.97%), Postives = 132/252 (52.38%), Query Frame = 3
Query:   66 WILVVALNYFS-----RGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL--DLQGIRRRMTVYFGKMLDVFDRLI 791
            W ++VA  +FS     R  +   + LPPGP   P+IGNL +LG KPH S+ KL++ +GP+M+L+FG V+TVV S+    KE+L+  D   C+R   T P A   +   + G  + P    WR +RK+     ++++++ + QH R++++  L+ ++ +       +++       + ++I   +F I+L    SK    +++   G ME  G    +D+FP++  +   + G+  +    F  M   FD+ I
Sbjct:    4 WYIIVAFVFFSTIIIVRNTRKTKKNLPPGPPRLPIIGNLHQLGSKPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYP-ARLTYNLKDIG--FCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKLMKLSGSVICRVVFGINLKG--SKLENLYEEVIQGTMEVVGSFAAADYFPIIGRIIDRITGLHSKCEKIFKAMDAFFDQSI 250          
BLAST of CF836089 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.952e-25
Identity = 76/226 (33.63%), Postives = 111/226 (49.12%), Query Frame = 3
Query:  120 RRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAH-GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLID 794
            RRLPPGP  +PVIG L  LG  PH +LAK+AK +GPIM LK G    VV S+   AK  L+  D +F NR  P+A   H  ++   M + P    W+ LRK+ N H    + L+   ++R  ++  +L  + +    G  I +         N+I   + S  +     K   EFK     +M  AG  N+ DF P +  +DLQGI + M     K  D+  ++ +
Sbjct:   34 RRLPPGPEGWPVIGALPLLGGMPHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRP-PNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDASHVGERIVVADMLTFAMANMIGQVMLSKRVFVEKGKEVNEFKNMVVELMTVAGYFNIGDFIPQIAWMDLQGIEKGMKKLHKKFDDLLTKMFE 258          
BLAST of CF836089 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.680e-25
Identity = 72/245 (29.39%), Postives = 127/245 (51.84%), Query Frame = 3
Query:   69 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL-----DLQGIRRR----MTVYFGKMLDV 776
            ILV   N+ +R      +R PP P   P+IGNL +LG+ PH+SL KL+K +GP+M LK G+V TV+ SS+  AK+ L+  D   C+R          ++   + + P    W+ +RK+     FSS+Q+ + Q ++ ++++ L+  + E+    T I++ +     T++++  T FS++  + T   +  F       +E  G  + SDF P +  +      LQG R R    +  ++ +M D+
Sbjct:   15 ILVAVFNHKNR---RNYQRTPPSPPGCPIIGNLHQLGELPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCRTAFSVNF-EGTVLNSERFNNIVREALEMLGSFSASDFIPYVGRIIDLLTGLQGRRERSMRDLDAFYEQMFDL 255          
BLAST of CF836089 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.265e-24
Identity = 69/229 (30.13%), Postives = 122/229 (53.28%), Query Frame = 3
Query:  117 SRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEF-GMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAG-TAIHIGQAAFDTTLNLISNTIFSIDLAD-PTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRR-------RMTVYFGKMLD 773
            + RLPPGP P+P+IGN  ++    H++L  LA+ +GPI+ L+FG V TVV SS+  AK  L+  D  F +R  P ++  +  + F  + + P    WR +RKIC     +S+++++ +H+R++++  ++  + E   +G  A+++ +A   +  N++   +     +D       + F      +    G  N+ DF P L+ LDLQGI+R       R   +  KM+D
Sbjct:   39 NERLPPGPYPWPIIGNFHQVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRP-PTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWRILARKKFSDNDLGADGKGFADLVVEVSIAVGSLNIGDFIPYLDCLDLQGIKRALKKANARFDAFAEKMID 266          
BLAST of CF836089 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.653e-24
Identity = 69/252 (27.38%), Postives = 135/252 (53.57%), Query Frame = 3
Query:   66 WILVVALNYF------SRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIY-AHGHHEFG-MPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL--DLQGIRRRMTVYFGKMLDVFDRLI 791
            W  +V  ++F      ++  ++  + LPPGP   P+IGNL +LG KP +SL KL++ +G +MSLKFG V+ VV S+    K++L+  D   C+R  P   Y A   + F  + + P +  WR +RK+     ++++++ + Q++R++++   + +++++      +++ Q     + ++I    F I L    SK A  +++   G ME  G+   +D+FP++  +   + G+  +    F +M   FD+ I
Sbjct:    3 WWFIVGASFFFAFILIAKDTRTTKKNLPPGPPRLPIIGNLHQLGSKPQRSLFKLSEKYGSLMSLKFGNVSAVVASTPETVKDVLKTFDAECCSR--PYMTYPARVTYNFNDLAFSPYSKYWREVRKMTVIELYTAKRVKSFQNVRQEEVASFVDFIKQHASLEKTVNMKQKLVKLSGSVICKVGFGISL--EWSKLANTYEEVIQGTMEVVGRFAAADYFPIIGRIIDRITGLHSKCEKVFKEMDSFFDQSI 250          
BLAST of CF836089 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.158e-24
Identity = 64/226 (28.32%), Postives = 119/226 (52.65%), Query Frame = 3
Query:   27 MDMVSCVPCLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP 704
            M ++  V  +L   IL+VA+ +  R +     R PP P   P+IGNL +LG+ PH+SL KL+K +GP+M LK G+V TV+ S+   AK++L++ D   C+R   +      ++   + +      W+ LRK+C    F ++++++ Q ++  +++ L+  + E+    T +++        +N+I   +F ++    T     +F+      +E  G  + SDFFP
Sbjct:    1 MTVLWFVSLILLISILLVAVKHSKRRWV----RQPPSPPGLPIIGNLHQLGELPHQSLCKLSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLSDTFLSLNVNVICKAVFGVNF-QGTVLNNDKFQDLVHEALEMLGSFSASDFFP 221          
BLAST of CF836089 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.682e-24
Identity = 74/253 (29.25%), Postives = 127/253 (50.20%), Query Frame = 3
Query:   45 VPCLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP----VLENL-DLQGIRRR----MTVYFGKMLDV 776
            +P L  S +L+ AL    R      +R PP P  +P+IGNL +LG+ PH+SL  L+K +GP+M LKFG + TVV SS+  AK+ L+  D + C+R       A  ++   + + P    W+ LR++C    FS +Q+   Q +R ++++ L+    E+    T +++ +     T+ +I    F +     T   +  F +         G  + SD+FP    +++ L  LQG R R    +  ++ +M D+
Sbjct:    7 LPLLFLSCLLLAALRLKKR---RQHQRKPPSPPGFPIIGNLHQLGELPHQSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEVKKLMNSFSESAAQKTPVNLSEKLASLTVGVICKAAFGVSF-QGTVLNSDNFDKLIHDAFLFLGSFSASDYFPNVGWIIDWLTGLQGQRERSVRGLDAFYEQMFDL 255          
BLAST of CF836089 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24
Identity = 74/235 (31.49%), Postives = 116/235 (49.36%), Query Frame = 3
Query:  108 KSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKT---AREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLID 794
            K   + LPP P   P+IG+L  +   PH+   KL+  HGPIM L  G V  VV S+A  AKE L+  + +F NR    +     A+   +F   + P    W+ ++K+C S   S R +D    +R+++ +  ++ V     AG A+  G    D  + L +N +  + L+  TS+    A E K+    + E  GK N+SDF   L+  DLQG  R++     +  D FD ++D
Sbjct:   23 KQSKKNLPPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFG----DELMTLSNNIVSRMTLSQKTSENDNQAEEMKKLVSNIAELMGKFNVSDFIWYLKPFDLQGFNRKIK----ETRDRFDVVVD 249          
The following BLAST results are available for this feature:
BLAST of CF836089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
F3PH_ARATH4.965e-2934.47Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71BC_ARATH2.086e-2729.08Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH3.558e-2728.97Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C75A2_SOLME1.952e-2533.63Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71BV_ARATH5.680e-2529.39Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C75A1_PINTA1.265e-2430.13Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71BE_ARATH1.653e-2427.38Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH2.158e-2428.32Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71BY_ARATH3.682e-2429.25Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN6.280e-2431.49Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02G09_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836089 ID=CF836089; Name=CF836089; organism=Citrus sinensis; type=EST; length=796bp
TTCAACAAAAGCGATCGAGATTAAAGATGGATATGGTAAGCTGCGTACCA
TGCCTTCTATTCTCGTGGATTTTGGTCGTCGCTTTAAATTACTTTTCAAG
AGGATTCAAATCTGGATCCAGAAGGCTTCCACCGGGACCGACGCCTTATC
CGGTGATCGGAAACCTCCTGGAACTCGGCGACAAACCTCACAAGTCACTT
GCTAAACTTGCCAAGATTCATGGCCCCATAATGAGTCTAAAATTTGGCCA
GGTGACCACAGTTGTCTTTTCTTCTGCAGCCATGGCCAAAGAAATCCTTC
AAAATCAAGACACATCTTTCTGTAATCGAACAATCCCAGACGCAATCTAC
GCCCACGGCCATCATGAATTCGGGATGCCCTGGCTGCCTGTGGCGACACT
GTGGAGAAATCTTCGAAAAATATGCAACTCACATGCTTTCTCTAGTCGCC
AACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCCAAGATCTTCTA
GCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATACATATTGGCCA
AGCTGCTTTCGACACTACGCTTAATTTGATATCCAACACAATTTTTTCTA
TTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGTTTAAGCAAACA
AATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTGTCCGATTTTTT
TCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCGTCGCATGACAG
TTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGATTGATCA
back to top