CF836092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836092 vs. ExPASy Swiss-Prot
Match: H4_TETTH (Histone H4 OS=Tetrahymena thermophila GN=HHF1 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 6.958e-30 Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = -3 Query: 113 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 334 +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRTLY Sbjct: 26 SIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
BLAST of CF836092 vs. ExPASy Swiss-Prot
Match: H42_TETPY (Histone H4, minor OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 6.958e-30 Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = -3 Query: 113 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 334 +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRTLY Sbjct: 26 SIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
BLAST of CF836092 vs. ExPASy Swiss-Prot
Match: H41_TETPY (Histone H4, major OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 6.958e-30 Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = -3 Query: 113 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 334 +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRTLY Sbjct: 26 SIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
BLAST of CF836092 vs. ExPASy Swiss-Prot
Match: H4_ENTHI (Histone H4 OS=Entamoeba histolytica PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.024e-29 Identity = 62/76 (81.58%), Postives = 71/76 (93.42%), Query Frame = -3 Query: 113 RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 340 +D ++GITKPAIRRLARRGGVKRI+G +Y+ETR VLK FLE VIRD+VTYTEHA+R+TVTAMDVVYALKRQGRTLY Sbjct: 40 QDALKGITKPAIRRLARRGGVKRINGAVYDETRNVLKQFLEQVIRDSVTYTEHAKRRTVTAMDVVYALKRQGRTLY 115
BLAST of CF836092 vs. ExPASy Swiss-Prot
Match: H42_BLEJA (Histone H4 (Fragment) OS=Blepharisma japonicum GN=H4 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.238e-28 Identity = 61/75 (81.33%), Postives = 72/75 (96.00%), Query Frame = -3 Query: 125 VLRDNIQGITKPAIRRLARRGGVKR-ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQG 346 V+R+N QGITKPAIRRLARRGGVKR +SGL+Y+ETR VLK+FLE+V+RDAVTYTEHA+R+TVTA+DVVYALKRQG Sbjct: 15 VIRENNQGITKPAIRRLARRGGVKRTLSGLVYDETRNVLKVFLESVVRDAVTYTEHAKRETVTALDVVYALKRQG 89
BLAST of CF836092 vs. ExPASy Swiss-Prot
Match: H4_DICDI (Histone H4 OS=Dictyostelium discoideum GN=H4a PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.512e-28 Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = -3 Query: 113 RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 340 +++I GITKPAIRRLARRGGVKRIS IYEETR VL+ FL NVIRD+V YTEHA R+TVTAMDVVYALKRQGRTLY Sbjct: 29 KEHINGITKPAIRRLARRGGVKRISFPIYEETRNVLRTFLTNVIRDSVAYTEHAGRRTVTAMDVVYALKRQGRTLY 104
BLAST of CF836092 vs. ExPASy Swiss-Prot
Match: H4G_HUMAN (Histone H4-like protein type G OS=Homo sapiens GN=HIST1H4G PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.095e-26 Identity = 63/77 (81.82%), Postives = 65/77 (84.42%), Query Frame = -3 Query: 116 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 346 VL DNIQGITK IRRLAR GGVKRI GLIYEETR V K+FLENVI AVT TEHA+RKTVTAM VVY LKRQGRTL Sbjct: 22 VLSDNIQGITKCTIRRLARHGGVKRILGLIYEETRRVFKVFLENVIWYAVTNTEHAKRKTVTAMAVVYVLKRQGRTL 98
BLAST of CF836092 vs. ExPASy Swiss-Prot
Match: H4_ENCCU (Histone H4 OS=Encephalitozoon cuniculi GN=HHF1 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11 Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = -3 Query: 125 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQG 322 I+KPAIRR+ARR GV+R+ G ++E + ++ + + A Y HA+RKT+T D++++LKR G Sbjct: 32 ISKPAIRRIARRAGVRRVGGGCFKEINNAAREYIRDTLSIACIYATHAKRKTITCSDILHSLKRMG 97 The following BLAST results are available for this feature:
BLAST of CF836092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836092 ID=CF836092; Name=CF836092; organism=Citrus sinensis; type=EST; length=459bpback to top |