CF836105

Overview
NameCF836105
Unique NameCF836105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836105 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 41/142 (28.87%), Postives = 68/142 (47.89%), Query Frame = -2
Query:  104 TYGYLLSYYWNNDYNVRKALRIRL-GSKGEWQRCNFGL--PYAREIHSSFSYHVSLSTKGYRSLIYSGDHDMMVPFLGTEAWIKSLNYSIADDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHTAPEYRPAECYAMFQRWI 520
            T  Y   Y+  N  +V++A+   + G + +W  C+  L   +     +    +  L+  G R  I+SGD D +VP   T   +  LN  +   W PW   +QV G+T  Y   +T+ATV+G GH  P + P     +F+ ++
Sbjct:  318 TESYAEKYF--NRPDVQRAMHANVTGIRYKWTACSDVLIKTWKDSDKTMLPIYKELAASGLRIWIFSGDTDSVVPVTATRFSLSHLNLPVKTRWYPWYTDNQVGGWTEVYKG-LTFATVRGAGHEVPLFEPKRALILFRSFL 456          
BLAST of CF836105 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11
Identity = 42/135 (31.11%), Postives = 64/135 (47.41%), Query Frame = -2
Query:   92 NDYNVRKALRIRLG-SKGEWQRCNFGL--PYAREIHSSFSYHVSLSTKGYRSLIYSGDHDMMVPFLGTEAWIKSLNYSIADDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHTAPEYRPAECYAMFQRWINHDP 487
            N  +V+K+L    G +   W  CN  +   +     S    +  L   G R  +YSGD D  VP L T   + +L   I   WRPW    QV+G+ + Y   +T+AT +G GH  P ++P+   A F  +++  P
Sbjct:  327 NRADVQKSLHASDGVNLKNWSICNMEIFNNWTGSNPSVLPIYEKLIAGGLRIWVYSGDTDGRVPVLATRYSLNALELPIKTAWRPWYHEKQVSGWLQEYEG-LTFATFRGAGHAVPCFKPSSSLAFFSAFLSGVP 460          
BLAST of CF836105 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11
Identity = 41/132 (31.06%), Postives = 68/132 (51.52%), Query Frame = -2
Query:   89 VRKALRIRLG-SKGEWQRCNFGLP--YAREIHSSFSYHVSLSTKGYRSLIYSGDHDMMVPFLGTEAWIKSLNYSIADDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL 475
            V+KAL +  G +  +W  C+  +   +     S  + +  L   G R  ++SGD D +VP   T   I +LN      + PW L  QV G+++ Y+  + + TV+G GH  P +RP +  A+F+ +I+  PL
Sbjct:  331 VQKALHVPPGLAPSKWDTCSDVVSEHWNDSPSSVLNIYHELIAAGLRIWVFSGDADAVVPVTSTRYSIDALNLRPLSAYGPWYLDGQVGGWSQQYAG-LNFVTVRGAGHEVPLHRPKQALALFKAFISGTPL 461          
BLAST of CF836105 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.284e-11
Identity = 38/136 (27.94%), Postives = 66/136 (48.53%), Query Frame = -2
Query:   89 NDYNVRKALRIRLGSKG-EWQRCN--FGLPYAREIHSSFSYHVSLSTKGYRSLIYSGDHDMMVPFLGTEAWIKSLNYSIADDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL 487
            N  +V+KAL   +      W+ C+   G  +     S    +  L T G +  ++SGD D +VP   T   + +L  +   +W PW  H +V G+++ Y   +T  TV G GH  P +RP + + +F+ ++   P+
Sbjct:  322 NRLDVQKALHANVTRLSYPWKACSDIVGSYWDDSPLSMLPIYKELITAGLKIWVFSGDTDAVVPITATRYSVDALKLATITNWYPWYDHGKVGGWSQVYKG-LTLVTVAGAGHEVPLHRPRQAFILFRSFLESKPM 456          
BLAST of CF836105 vs. ExPASy Swiss-Prot
Match: CBP21_HORVU (Serine carboxypeptidase II-1 (Fragment) OS=Hordeum vulgare GN=CXP;2-1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.982e-11
Identity = 45/153 (29.41%), Postives = 68/153 (44.44%), Query Frame = -2
Query:   71 TYGYLLSYYWNNDYNVRKALRIRL-GSKGEWQRCNFGLP--YAREIHSSFSYHVSLSTKGYRSLIYSGDHDMMVPFLGTEAWIKSLNYSIADDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHTAPEYRPAECYAMFQRWINHDPL*LPTIS 520
            T  Y   YY  N   V+KA R  + G    W  C+  L   +     S    +  L   G R  ++SGD D +VP   T   I +L      +W PW    +VAG+ + Y   +T  T++G GH  P +RP +   +F+ ++   P+  P  S
Sbjct:  171 TEQYSTKYY--NLPEVQKAFRANVTGIPYSWTACSDVLSDHWKDSPRSMLPIYRELIAAGIRIWVFSGDADSVVPLTATRYSIDALYLPTVTNWYPWYDEEEVAGWCQVYKG-LTLVTIRGAGHEVPLHRPQQALKLFEHFLQDKPMPRPAHS 320          
The following BLAST results are available for this feature:
BLAST of CF836105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
SCP24_ARATH1.339e-1128.87Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP31_ARATH1.748e-1131.11Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
SCP29_ARATH1.748e-1131.06Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
SCP27_ARATH2.284e-1127.94Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
CBP21_HORVU2.982e-1129.41Serine carboxypeptidase II-1 (Fragment) OS=Hordeum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02G20_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836105 ID=CF836105; Name=CF836105; organism=Citrus sinensis; type=EST; length=620bp
GAAGAAGCATAACATACTTACTGATACCCTTTACTTACTGATACAGAGTA
CTTTAGACCAGATAATAGCTAGAAATTGTAGGCAACTACAACGGATCATG
ATTTATCCATCTTTGAAACATAGCATAACATTCTGCAGGCCTGTACTCGG
GAGCAGTGTGCCCTCCTCCCTTTACGGTGGCATATGTCATTCGGTTGGAG
TAAGTCCTCGTATATCCTGCTACTTGGCTGTGGAGGATCCATGGCCTCCA
GTCATCAGCAATGGAGTAATTGAGGGATTTTATCCAAGCTTCTGTTCCTA
GGAATGGTACCATCATGTCATGATCGCCGCTATAAATCAAAGAGCGGTAG
CCTTTAGTACTGAGGCTTACATGATATGAAAAACTGCTGTGAATTTCACG
TGCATAAGGCAAACCAAAATTGCACCGCTGCCATTCCCCTTTGCTTCCCA
GTCTTATACGAAGTGCTTTACGAACATTATAGTCATTATTCCAATAGTAA
GAGAGCAAATATCCGTAAGTCTGCAGGAGAAAAAATAGTTTCCATAACAC
AGTTTCAGTAGAATCTAATCCATTTGTTGTGCTATTCAAGAGCATTTACA
GTATATAGAGTGCTTTTGAT
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