CF836106

Overview
NameCF836106
Unique NameCF836106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.867e-17
Identity = 46/108 (42.59%), Postives = 65/108 (60.19%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYA 492
            LPG Q  + F+  +GYV V +     LFYYF ++E NP   PL+LWL GGPGCS+   G   E GP       +    P L  N +SW +EA++L++++PVG G+SY+
Sbjct:   35 LPG-QPRVGFQQYSGYVTVDDKKQRALFYYFAEAETNPSSKPLVLWLNGGPGCSSLGVGAFSENGP-------FRPKGPILVKNQHSWNQEANMLYLETPVGVGFSYS 134          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.867e-17
Identity = 46/98 (46.94%), Postives = 66/98 (67.35%), Query Frame = 1
Query:  211 TGYVGVGESGDAQLFYYFVKS-EKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKT 498
            +GYV V +     LF++F ++  ++P   PL+LWL GGPGCS+   G A E+GP  F VVE NG+  +L  N YSW +EA++LF++SPVG G+SY  +
Sbjct:   49 SGYVNVNQENTRSLFFWFFEALSESPSTRPLVLWLNGGPGCSSIGYGAASELGP--FRVVE-NGT--SLSFNQYSWVQEANMLFLESPVGVGFSYTNS 141          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.968e-17
Identity = 49/118 (41.53%), Postives = 63/118 (53.39%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAY-EIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGD 522
            LPG Q  + F+   GYV V       LFYY+V++ K P   PL LWL GGPGCS+  G A+ E+GP         G    L +N  SW K + +LFV+SP G G+SY+        GD
Sbjct:   36 LPG-QPTVGFKQYAGYVDVDVKAGRSLFYYYVEAVKQPDSKPLTLWLNGGPGCSSIGGGAFTELGPF-----YPTGDGRGLRVNSMSWNKASHLLFVESPAGVGWSYSNKSSDYNTGD 147          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CBPY_YEAST (Carboxypeptidase Y OS=Saccharomyces cerevisiae GN=PRC1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.408e-16
Identity = 40/96 (41.67%), Postives = 59/96 (61.46%), Query Frame = 1
Query:  211 TGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHL--NPYSWTKEASILFVDSPVGTGYSYA 492
            TGY+ V E  D   F++  +S  +P +DP++LWL GGPGCS+ +GL +E+GP +          P L    NPYSW   A+++F+D PV  G+SY+
Sbjct:  129 TGYLDV-EDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPSSIG--------PDLKPIGNPYSWNSNATVIFLDQPVNVGFSYS 215          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CBP3_HORVU (Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CBP3 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.295e-15
Identity = 47/131 (35.88%), Postives = 73/131 (55.73%), Query Frame = 1
Query:  172 LPGF-QGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYA---------KTPLASQAGDFKQV 534
            LPG  +G        GY  +  + DA++FY+F +S +  +EDP+++WLTGGPGCS+   + YE GP          +  +L  N + W K ++I+FVD P GTG+SY+         +T +++   DF QV
Sbjct:   81 LPGLPEGVADLGHHAGYYRLPNTHDARMFYFFFES-RGKKEDPVVIWLTGGPGCSSELAVFYENGPFTI------ANNMSLVWNKFGWDKISNIIFVDQPTGTGFSYSSDDRDTRHDETGVSNDLYDFLQV 204          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.295e-15
Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKT 498
            LPG Q  + F++ +GY+ V E+    LFY   ++ +  +  PL+LWL GGPGCS+ + G + E+G   F V+     L    LN Y W K A++LF+DSP G G+SY  T
Sbjct:   46 LPG-QPEVDFDMYSGYITVDEAAGRSLFYLLQEAPEEAQPAPLVLWLNGGPGCSSVAYGASEELGA--FRVMPRGAGLV---LNEYRWNKVANVLFLDSPAGVGFSYTNT 149          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CBPX_ORYSJ (Serine carboxypeptidase-like OS=Oryza sativa subsp. japonica GN=CBP31 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.691e-15
Identity = 40/97 (41.24%), Postives = 63/97 (64.95%), Query Frame = 1
Query:  214 GYVGVGESGDAQLFYYFVKSEKNPRED-PLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTP 501
            GY  +  + DA+LFY+F +S  +  ED P+++WLTGGPGCS+   L YE GP  F++ +      +L  N + W +E+++++VD P GTG+SY+  P
Sbjct:   19 GYYRLPNTHDARLFYFFFESRGSKGEDDPVVIWLTGGPGCSSELALFYENGP--FHIADN----MSLVWNDFGWDQESNLIYVDQPTGTGFSYSSNP 109          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.209e-15
Identity = 45/110 (40.91%), Postives = 66/110 (60.00%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKT 498
            LPG Q  + F++ +GY+ V E     LFY   ++ ++ +  PL+LWL GGPGCS+ + G + E+G      V+  G+   L LN Y W K A++LF+DSP G G+SY  T
Sbjct:   14 LPG-QPAVDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFR---VKPRGA--GLVLNEYRWNKVANVLFLDSPAGVGFSYTNT 117          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP48_ARATH (Serine carboxypeptidase-like 48 OS=Arabidopsis thaliana GN=SCPL48 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.885e-15
Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 1
Query:  199 FELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSY 489
            F    GY  +  S  A++FY+F +S  N + DP+++WLTGGPGCS+   L YE GP     V  N S   L  N + W K +++++VD PVGTG+SY
Sbjct:   99 FGHHAGYYKLPNSKAARMFYFFFESRTN-KADPVVIWLTGGPGCSSELALFYENGPF---TVSNNSS---LSWNEFGWDKASNLIYVDQPVGTGFSY 188          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.885e-15
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 1
Query:  172 LPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYA 492
            LPG Q  + F+  +GYV + E     LFYY  ++E  P   PL+LWL GGPGCS+   G   E GP         GS+  L  N +SW +EA++L++++PVG G+SYA
Sbjct:   37 LPG-QPRVGFQQYSGYVTIDEKKQRALFYYLAEAETKPISKPLVLWLNGGPGCSSLGVGAFSENGPF-----RPKGSI--LVRNQHSWNQEANMLYLETPVGVGFSYA 136          
The following BLAST results are available for this feature:
BLAST of CF836106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
SCP45_ARATH6.867e-1742.59Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
SCP33_ARATH6.867e-1746.94Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
SCP42_ARATH8.968e-1741.53Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
CBPY_YEAST3.408e-1641.67Carboxypeptidase Y OS=Saccharomyces cerevisiae GN=... [more]
CBP3_HORVU1.295e-1535.88Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CB... [more]
CBP2_HORVU1.295e-1540.91Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
CBPX_ORYSJ1.691e-1541.24Serine carboxypeptidase-like OS=Oryza sativa subsp... [more]
CBP2_WHEAT2.209e-1540.91Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SCP48_ARATH2.885e-1543.30Serine carboxypeptidase-like 48 OS=Arabidopsis tha... [more]
SCP46_ARATH2.885e-1542.59Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02G20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836106 ID=CF836106; Name=CF836106; organism=Citrus sinensis; type=EST; length=569bp
TGAAGATTGTTCCCTAGTTGTTTCTCAAAGAAACTGGTTGGTTAAGACTT
AACATGCTGGAAAAGCCGAAAACAAACGCCAATGGACAAGCTTTGTTTTC
CTCTTCTTCTTCTTCTTCTTCTTGTACAGCTTTGCATGCAGCTTGCAGCT
TCTTACTCAACTGTTAAATTTCTTCCGGGATTCCAGGGCCCCCTCCCCTT
TGAACTTGAAACTGGGTATGTAGGAGTAGGTGAGTCGGGGGACGCACAGC
TCTTCTATTACTTTGTGAAGTCGGAGAAAAATCCAAGAGAGGACCCTCTC
TTGCTTTGGCTTACTGGTGGCCCTGGCTGCTCTGCCTTCTCAGGTCTTGC
TTATGAAATTGGTCCAATAAATTTCAACGTAGTGGAGTACAACGGGAGCT
TGCCTACTTTGCACTTGAATCCCTACTCATGGACAAAGGAAGCCAGCATA
TTATTTGTGGATTCGCCTGTTGGCACTGGATATTCCTACGCAAAAACCCC
ACTTGCCTCTCAAGCCGGTGACTTCAAACAAGTTCAGCAGGTTGACCAAT
TTTCTTCGAAAGTGGCTAT
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