CF836106

Overview
NameCF836106
Unique NameCF836106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: PEPS_ASPSA (Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpdS PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.527e-13
Identity = 36/99 (36.36%), Postives = 56/99 (56.57%), Query Frame = 1
Query:  199 FELETGYVGV---GESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYS 486
            F++   Y G+     +G++ LF++F  S+     D + +WL GGPGCS+  GL  E GP  +    Y   +P    NPYSWT   +++++D P GTG+S
Sbjct:   72 FDVGESYAGLLPNTPTGNSSLFFWFFPSQNPDASDEITIWLNGGPGCSSLDGLLQENGPFLWQPGTYK-PVP----NPYSWTNLTNVVYIDQPAGTGFS 165          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CPVL_HUMAN (Probable serine carboxypeptidase CPVL OS=Homo sapiens GN=CPVL PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.286e-12
Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 1
Query:  187 GPLP---FELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSY 489
            GP P    +   G++ V ++ ++ LF++F  ++  P + P++LWL GGPG S+  GL  E GP    VV  N    TL    + WT   S+L++D+PVGTG+S+
Sbjct:   64 GPFPGLNMKSYAGFLTVNKTYNSNLFFWFFPAQIQPEDAPVVLWLQGGPGGSSMFGLFVEHGPY---VVTSN---MTLRDRDFPWTTTLSMLYIDNPVGTGFSF 161          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SPCA_NANOT (Carboxypeptidase S1 homolog A OS=Nannizzia otae (strain CBS 113480) GN=SCPA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.899e-12
Identity = 37/110 (33.64%), Postives = 58/110 (52.73%), Query Frame = 1
Query:  160 TVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSY 489
            T + +  F G +         GV ++     F++F ++ ++P+  PL +WL GGPG S+  GL  E GP   N    N S  T + NPYSW  + ++L++D P   G+SY
Sbjct:   52 TTEGVRSFTGHVHLPPNNNDFGVNQNYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGPCMVN----NDSNSTTN-NPYSWNNKVNMLYIDQPNQVGFSY 156          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CPVL_PONAB (Probable serine carboxypeptidase CPVL OS=Pongo abelii GN=CPVL PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.899e-12
Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 1
Query:  214 GYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSY 489
            G++ V ++ ++ LF++F  ++  P + P++LWL GGPG S+  GL  E GP    VV  N    TL    + WT   S+L++D+PVGTG+S+
Sbjct:   76 GFLTVNKTYNSNLFFWFFPAQIQPEDAPVVLWLQGGPGFSSMFGLFVEHGPY---VVTSN---MTLRDRDFPWTTTLSMLYIDNPVGTGFSF 161          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CPVL_MOUSE (Probable serine carboxypeptidase CPVL OS=Mus musculus GN=Cpvl PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 5.092e-12
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 1
Query:  214 GYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSY 489
            GY+ V ++ ++ LF++F  +   P + P++LWL GGPG S+  GL  E GP          S  T+    + WT   S+L++D+PVGTG+S+
Sbjct:   78 GYITVNQTYNSNLFFWFFPARMQPEDAPVVLWLQGGPGGSSMFGLFVEHGPYIIT------SNMTVVARDFPWTFTLSMLYIDNPVGTGFSF 163          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP50_ARATH (Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.651e-12
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 1
Query:  208 ETGYVGVGESGDAQLFYYFVKSEK--NPRED-PLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYA 492
            ++GY+ V  +  + +FY F ++++   P  D PLL+WL GGPGCS+  G  YE+GP  + VV        L  NP +W +   +LFVD+P+G G+S A
Sbjct:   36 KSGYLPVKPAPGSSMFYAFYEAQEPTTPLPDTPLLVWLQGGPGCSSMIGNFYELGP--WRVV---SRATDLERNPGAWNRLFGLLFVDNPIGVGFSIA 128          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: CPVL_RAT (Probable serine carboxypeptidase CPVL OS=Rattus norvegicus GN=CPVL PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.651e-12
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 1
Query:  214 GYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSY 489
            GY+ V ++ ++ LF++F  +   P + P++LWL GGPG S+  GL  E GP          S  T+    + WT   S+L++D+PVGTG+S+
Sbjct:   78 GYITVNQTYNSNLFFWFFPARTQPADAPVVLWLQGGPGGSSMFGLFVEHGPYIIT------SNMTVLSRDFPWTFSLSMLYIDNPVGTGFSF 163          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: KEX1_YEAST (Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae GN=KEX1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.482e-11
Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 1
Query:  232 ESGDAQLFYY-FVKSEKNPRED-PLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYS 486
            +S D + F++ F  ++ N   D PL++WL GGPGCS+  G   E GP   N      S   L+LN  SW  +  +LF+D P GTG+S
Sbjct:   67 DSSDLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVN------SDGKLYLNEGSWISKGDLLFIDQPTGTGFS 147          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: VCP_AEDAE (Vitellogenic carboxypeptidase OS=Aedes aegypti GN=VCP PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 2.527e-11
Identity = 32/96 (33.33%), Postives = 58/96 (60.42%), Query Frame = 1
Query:  202 ELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSY 489
            E  +G++ V    ++ LF+++V ++ N  + P+L+WL GGPG S+  G+  E GP +   +  N S+       YSW +   ++++D+PVGTG+S+
Sbjct:   75 ESYSGFMTVDAKHNSNLFFWYVPAKNNREQAPILVWLQGGPGASSLFGMFEENGPFH---IHRNKSVKQ---REYSWHQNHHMIYIDNPVGTGFSF 164          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCPB_TRIRU (Carboxypeptidase S1 homolog B OS=Trichophyton rubrum GN=SCPB PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11
Identity = 32/89 (35.96%), Postives = 48/89 (53.93%), Query Frame = 1
Query:  223 GVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSY 489
            GV +      F++F ++ K+P   PL +W+ GGPG S+  G+  E GP        N    +  LNP+SW  E ++L++D PV  G SY
Sbjct:   75 GVEQDYPINTFFWFFEARKDPENAPLGIWMNGGPGSSSMFGMMTENGP-----CFVNADSNSTRLNPHSWNNEVNMLYIDQPVQVGLSY 158          
The following BLAST results are available for this feature:
BLAST of CF836106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
PEPS_ASPSA3.527e-1336.36Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpd... [more]
CPVL_HUMAN2.286e-1237.50Probable serine carboxypeptidase CPVL OS=Homo sapi... [more]
SPCA_NANOT3.899e-1233.64Carboxypeptidase S1 homolog A OS=Nannizzia otae (s... [more]
CPVL_PONAB3.899e-1239.13Probable serine carboxypeptidase CPVL OS=Pongo abe... [more]
CPVL_MOUSE5.092e-1236.96Probable serine carboxypeptidase CPVL OS=Mus muscu... [more]
SCP50_ARATH6.651e-1239.80Serine carboxypeptidase-like 50 OS=Arabidopsis tha... [more]
CPVL_RAT6.651e-1236.96Probable serine carboxypeptidase CPVL OS=Rattus no... [more]
KEX1_YEAST1.482e-1140.23Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae ... [more]
VCP_AEDAE2.527e-1133.33Vitellogenic carboxypeptidase OS=Aedes aegypti GN=... [more]
SCPB_TRIRU3.301e-1135.96Carboxypeptidase S1 homolog B OS=Trichophyton rubr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02G20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836106 ID=CF836106; Name=CF836106; organism=Citrus sinensis; type=EST; length=569bp
TGAAGATTGTTCCCTAGTTGTTTCTCAAAGAAACTGGTTGGTTAAGACTT
AACATGCTGGAAAAGCCGAAAACAAACGCCAATGGACAAGCTTTGTTTTC
CTCTTCTTCTTCTTCTTCTTCTTGTACAGCTTTGCATGCAGCTTGCAGCT
TCTTACTCAACTGTTAAATTTCTTCCGGGATTCCAGGGCCCCCTCCCCTT
TGAACTTGAAACTGGGTATGTAGGAGTAGGTGAGTCGGGGGACGCACAGC
TCTTCTATTACTTTGTGAAGTCGGAGAAAAATCCAAGAGAGGACCCTCTC
TTGCTTTGGCTTACTGGTGGCCCTGGCTGCTCTGCCTTCTCAGGTCTTGC
TTATGAAATTGGTCCAATAAATTTCAACGTAGTGGAGTACAACGGGAGCT
TGCCTACTTTGCACTTGAATCCCTACTCATGGACAAAGGAAGCCAGCATA
TTATTTGTGGATTCGCCTGTTGGCACTGGATATTCCTACGCAAAAACCCC
ACTTGCCTCTCAAGCCGGTGACTTCAAACAAGTTCAGCAGGTTGACCAAT
TTTCTTCGAAAGTGGCTAT
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