CF836118

Overview
NameCF836118
Unique NameCF836118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836118 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = -1
Query:  459 VYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 725
            V  +F +TD +R  +  H      L IGF+V + HL  I  TG  +NPARS   A++  K   +DD W+FW+GP +GA VA+  + Y+L
Sbjct:  142 VLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
BLAST of CF836118 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = -1
Query:  459 VYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 725
            V  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARSFG+AV+    + + + WIFWVGPFIG+ +A   + +IL
Sbjct:  150 VLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGSALAVLIYDFIL 231          
BLAST of CF836118 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 43/89 (48.31%), Postives = 54/89 (60.67%), Query Frame = -1
Query:  459 VYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 725
            V  V + TD +R  RD  +    PL IG +V + HL  I  TG GINPARSFG++VI +  K   D WIFWVGPFIG  +A   + +IL
Sbjct:  152 VLCVLATTDRRR--RD--LGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFK---DHWIFWVGPFIGGALAVLIYDFIL 233          
BLAST of CF836118 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = -1
Query:  459 VFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 716
            +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N+       W+FWVGP +GA VAA  + Y+L
Sbjct:  146 IFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAAVAAILYFYLL 225          
BLAST of CF836118 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = -1
Query:  462 VYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 725
            V+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARSFG AVI      W + WI+WVGP +GA +A   ++Y+
Sbjct:  171 VFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLAGALYEYV 251          
BLAST of CF836118 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = -1
Query:  462 VYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 725
            V+T+F++ D KR+     +     L IG +V + HL  I  TG  +NPARSFG AVI      W++ WI+WVGP IGA +A   ++Y+
Sbjct:  171 VFTIFASCDSKRTDVTGSIA----LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of CF836118 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = -1
Query:  459 VYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 725
            V  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARSFG+AV+    + + + WIFWVGPFIG  +A   + +IL
Sbjct:  150 VLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of CF836118 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = -1
Query:  459 VFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 716
            +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N+       W+FWVGP +GA +AA  + Y+L
Sbjct:  146 IFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAMLAAILYFYLL 225          
BLAST of CF836118 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = -1
Query:  459 VFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 716
            +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSFG AV+ N+       W+FWVGP +GA +AA  + Y+L
Sbjct:  146 IFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAVLAAILYFYLL 225          
BLAST of CF836118 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.165e-12
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = -1
Query:  459 VYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 725
            VY V+S A DPKR +    + ++APL IG  V    L   P  G  +NPAR+FG A++  +   W + WI+WVGPFIG  +AA  ++Y++
Sbjct:  164 VYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWR---WSNHWIYWVGPFIGGALAALIYEYMI 246          
The following BLAST results are available for this feature:
BLAST of CF836118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
AQP2_SHEEP1.622e-1240.45Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP1_RAT1.622e-1247.19Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_CANFA1.622e-1248.31Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP5_PIG2.119e-1245.98Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP4_MOUSE2.119e-1242.05Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_BOVIN2.119e-1242.05Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP1_MOUSE2.119e-1247.19Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP5_RAT2.767e-1244.83Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_MOUSE3.614e-1244.83Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
TIP32_ARATH6.165e-1242.22Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H04_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836118 ID=CF836118; Name=CF836118; organism=Citrus sinensis; type=EST; length=725bp
TTTTTTTTTTTTTTAGCAACTAAAAAAGGGCATAGTTTTATTCACTATAG
TTGGGGATTAATTAACATTAACAACATAAATACACCACTTGAAATAAAGA
AAAAGGAAAGGATAAGAAAAATATAGAGAAATAGGATATATAAAAAACAC
CACCACCACTTATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCA
AAATCCACCCTTACACATAGATAAAGCATAGGCATAAAATGCATAATGTT
CAAATATCTACAATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCC
CTCTAAAGAGCTTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTT
GCACTCCTGATCATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCA
TATTTAAAGCTTAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCT
GCTGCCCTGAGAATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAAT
GAATGGTCCAACCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGT
TGTAGATCACAGCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCG
GTGATGGGGATGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGG
GAGTGGTGCCAAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGAT
CAGTGGCAGAGAAAACAGTGTAGAC
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