CF836120

Overview
NameCF836120
Unique NameCF836120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF836120 vs. ExPASy Swiss-Prot
Match: ANTA_GENTR (Anthocyanin 5-aromatic acyltransferase OS=Gentiana triflora PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.138e-11
Identity = 67/241 (27.80%), Postives = 99/241 (41.08%), Query Frame = 1 
Query:   49 DISSSPLMLTQVTHFKCGGACIGLRLNHTLVDGLSAYHFVNSWAEITRG------VPITIQPLFDRTILGVGVPNSPKFHHIEYDPPPTSLNTTISQTSGSICTVILKLSLDQINTLKAKSKNDR--EPTIKYSRMTTIAAHIWRCVCRARGLSDDQVSK-----------LHFPTDGRSRLNPPLPMGYFGNAIFTTALTASSGNIQSEP-LNYTIERIHKAI-KRMDEEYLKSALAYLK 708
            D    PL+  QVT F   G  + L  +H++ D  S   F+N+WA I +       +   + P FDR+I+         F +   D               +       LSL +I  LK K  N R  EPTI+ +  T    ++W C+ +++   DD VS+             F  D R  L PP P  YFGN + +    A+   +  +  L   +  I +AI KR+  E  K  LA  K
Sbjct:  147 DYKVIPLVAVQVTVFPNRGIAVALTAHHSIADAKSFVMFINAWAYINKFGKDADLLSANLLPSFDRSIIKDLYGLEETFWNEMQDVLEMFSRFGSKPPRFNKVRATYVLSLAEIQKLKNKVLNLRGSEPTIRVTTFTMTCGYVWTCMVKSK---DDVVSEESSNDENELEYFSFTADCRGLLTPPCPPNYFGNCLASCVAKATHKELVGDKGLLVAVAAIGEAIEKRLHNE--KGVLADAK 382
The following BLAST results are available for this feature:
BLAST of CF836120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ANTA_GENTR6.138e-1127.80Anthocyanin 5-aromatic acyltransferase OS=Gentiana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836120 ID=CF836120; Name=CF836120; organism=Citrus sinensis; type=EST; length=795bp
CAAGGCTCAACCCTTTAAGCGCTTGTTCCGTCTGTGGATCATGCCAATGA
TATATCCTCTTCCCCACTCATGCTGACACAGGTAACTCATTTCAAGTGTG
GAGGCGCATGTATTGGACTCAGATTGAATCATACATTGGTAGATGGTCTT
TCAGCATACCATTTCGTCAACTCTTGGGCTGAGATTACACGTGGTGTTCC
TATTACGATTCAACCATTATTTGATCGAACTATACTAGGTGTTGGGGTCC
CAAATTCTCCTAAATTCCATCACATTGAATATGACCCACCTCCAACTTCC
CTAAATACTACTATTTCTCAAACTTCTGGATCCATTTGTACCGTAATCCT
TAAACTATCACTTGATCAAATCAACACCCTTAAAGCAAAATCTAAGAATG
ATCGTGAACCCACTATCAAGTACAGTAGAATGACTACTATAGCAGCGCAT
ATCTGGCGTTGCGTGTGCAGGGCACGAGGATTGTCTGATGATCAAGTCAG
TAAGTTGCACTTTCCCACGGACGGACGGTCAAGATTGAATCCGCCACTCC
CAATGGGGTATTTTGGTAATGCAATCTTCACCACTGCTTTGACAGCTTCA
TCAGGTAATATCCAATCAGAGCCATTGAATTATACAATAGAGAGAATTCA
TAAAGCAATAAAACGGATGGACGAAGAATATTTGAAATCAGCTCTTGCTT
ATCTAAAGCAACAGCCTGATCTGACGGTGCTCAGGAAAGGAGCACACACT
TATAAGTGCCCTAACCTGAACATAGTCAATTTGGCAAGCATGCCT
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