CF836133

Overview
NameCF836133
Unique NameCF836133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.310e-58
Identity = 109/219 (49.77%), Postives = 146/219 (66.67%), Query Frame = 1
Query:   82 SKNFTLLISIAI-SSLM-------VASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASY 714
            SK F LL+  +I SSL+       V S+ +F +DF +TW        N+G+  +L LD+ SG+ F S   +LFG+IDM++KL+ G+S GTV AYY+ S     DEIDFEFLGN++G PY L TNV+  G  +RE++ HLWFDP  DFHTYS+LWN  +IVF VD  PIR ++N    GV +P+ QPM + +SLWN + WATRGG  K DW++ PF AS+
Sbjct:    7 SKPFVLLVGFSIISSLLLWVSQASVVSSGDFNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQPNRDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASF 225          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.242e-57
Identity = 104/193 (53.89%), Postives = 137/193 (70.98%), Query Frame = 1
Query:  139 ASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYK 717
            A +F  ++ +TWG      LN G+ + LS+D +SGSGF+SKS Y  G   M++KL P +SAG VTA+YL S G T DE+DFEFLGN  G P  + TNVF+NG+G REQ+F  WFDPT  FHTY +LWNP +IVFYVD  PIR FKN++ +GV +P ++PM++ +SLWN ++WAT GG  K +W  APF A Y+
Sbjct:   29 AIDFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGDTHDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYP-SKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQ 220          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.899e-54
Identity = 97/191 (50.79%), Postives = 137/191 (71.73%), Query Frame = 1
Query:  148 FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            F Q++ +TWG      L++G+ + L +D++SG GF+SK  Y  G  +M++K+  GN+ G VTA+YL S G   DEIDFEFLGN +G P TL TN+F NG+G+RE++F LWF+PT  +HTY +LWNP +IVFYVD  PIR +KN   NGV +P ++PM++ +SLWN DDWAT GG  K +W+ +PF A +++
Sbjct:   35 FGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGGGHDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKN--ENGVSYP-SKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRD 222          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.879e-53
Identity = 98/194 (50.52%), Postives = 137/194 (70.62%), Query Frame = 1
Query:  136 SASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYK 717
            S   F  ++ +TWG      LN G+ + LSLD +SGSGF+SK+ Y  G   +++K+ P +++G VTA+YL S G+T DE+DFEFLGN  G    + TNVFTNGKG+REQ+  LWFDP+ DFHTY++LWNP +IV YVD  P+R FKN  S G+ +P ++PM++  SLWN ++WAT GG  K +W+ APF A+++
Sbjct:   35 SKVGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKGNTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYP-SKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQ 226          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 5.130e-43
Identity = 93/202 (46.04%), Postives = 120/202 (59.41%), Query Frame = 1
Query:  142 SNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKS----PGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDR-----EQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            S F ++F   WG    +      +++L LDK++GSGF+S   Y  G     +KL PG +AG  T+ YL +    PG   DE+D EFLG   G PY+L TNVF  G GDR     E +F LWFDPT DFH Y++LWNP +IVF+VD  PIR +     N  +FP  +PM +Y S+W+A DWAT  G IK D+   PF A YKN
Sbjct:   37 SPFDREFRTLWGSQHQR--REQDVVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDH-DEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYN--RKNEAIFP-TRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKN 232          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.271e-41
Identity = 89/201 (44.28%), Postives = 118/201 (58.71%), Query Frame = 1
Query:  145 NFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKS----PGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGD-----REQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            NFY+ F   WG    ++  N   L++ LD+ SGSGF+S   +  G     +KL PG +AG +T+ YL +    PG   DE+D EFLG   G PYTL TNV+  G GD     RE +F LWFDPT DFH Y++LW+P+ I+F VD  PIR +   + +   FP  +PM +Y S+W+A  WAT  G  K D+   PFTA Y N
Sbjct:   42 NFYKGFRNLWGPQHQRMDQNA--LTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFH-DEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYP--KKSASTFPL-RPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTN 236          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.446e-37
Identity = 86/220 (39.09%), Postives = 126/220 (57.27%), Query Frame = 1
Query:   73 MAYSKNFTLLIS-IAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPG---STWDEIDFEFLGNLSGDPYTLHTNVFTNGKGD--REQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASY 714
            + +   FT L+S  A+  L +     F + +   +GD    +  +G+ + L+LD+ +GSGF S   YL G     +KL    SAG V A+YL +        DEIDFEFLGN+ G  + + TN++ NG     RE++++LWFDPT DFH YS+LW+   I+FYVD  PIRE K   S G  FP  +PM +YS++W+   WAT GG    ++  AP+ + +
Sbjct:    8 LVFMSLFTSLVSGFALQKLPLIQ---FDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPA-KPMSLYSTIWDGSKWATDGGKYGVNYKYAPYVSQF 223          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 9.370e-37
Identity = 79/213 (37.09%), Postives = 123/213 (57.75%), Query Frame = 1
Query:   97 LLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPG---STWDEIDFEFLGNLSGDPYTLHTNVFTNGK--GDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            L+   A+ +L + S   F + +   +GD    +  +G+ + L+LD+ +GSGF S   YL G     +KL    +AG V A+Y+ +        DEIDFEFLGN+    + + TN++ NG     RE++++LWFDPT DFH YS+LW+   I+F+VD  PIRE K     G  FP ++PM +Y+++W+   WAT GG    ++  AP+ A + +
Sbjct:   17 LVSGFALQNLPITS---FEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFP-SKPMSLYTTIWDGSKWATNGGKYGVNYKYAPYIARFSD 225          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.224e-36
Identity = 82/226 (36.28%), Postives = 127/226 (56.19%), Query Frame = 1
Query:   67 STMAYSKNFTLLISIAISSLMVASASN---FYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPG---STWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDR--EQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            S  +Y+  F L++ + + S    +  N   F +     +GD       +   + L LD+ +GSGF S + Y  G     +KL    +AG V A+Y  +      T DE+D EFLGN+ G P+   TN++ NG   R  E+++ LWFDP+ +FH YS+LW P +I+F+VD  PIRE    ++ G  +P  +PM +Y+++W+A DWAT GG  K ++  APF A +K+
Sbjct:    2 SKSSYNHIFILILCLCLRSSSAFTNLNTLSFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPA-KPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKS 226          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.014e-35
Identity = 74/182 (40.66%), Postives = 111/182 (60.99%), Query Frame = 1
Query:  181 GRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGS---TWDEIDFEFLGNLSGDPYTLHTNVFTNG--KGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTAS 711
            G   I  NG L  L+LDK+SG+G  SK++Y +G    +LKL  G ++G V A+YL +  +   + DEID E LG    D +T+ TNV+ NG  +  RE++F+ WFDPT  FH Y+++WN    VF VD  P+R+F N  +    +P ++PM +Y ++W+  +WAT+GG    ++  APF  S
Sbjct:   52 GAHNIQVNGSLAKLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVS 232          
The following BLAST results are available for this feature:
BLAST of CF836133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
XTH10_ARATH3.310e-5849.77Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH2_ARATH6.242e-5753.89Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH3_ARATH2.899e-5450.79Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_ARATH1.879e-5350.52Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH5.130e-4346.04Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH6.271e-4144.28Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH1.446e-3739.09Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH9.370e-3737.09Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH1.224e-3636.28Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH3.014e-3540.66Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836133 ID=CF836133; Name=CF836133; organism=Citrus sinensis; type=EST; length=722bp
GAGAGAGAGCCCTTAAATACCAACCCTTATAAGCTGCTTTCTGAAAACTC
CCTCTTTATTGATTGCAGTACTATGGCTTACTCGAAAAATTTTACCCTGC
TCATCTCTATAGCAATCAGCTCTTTGATGGTTGCTTCTGCTAGTAATTTC
TACCAAGACTTTGATATCACTTGGGGAGATGGCCGTGGTAAGATACTCAA
CAACGGCCAGCTTCTCTCCCTCTCCCTTGACAAAGCCTCAGGCTCAGGCT
TCCAGTCCAAGAGCGAGTACCTTTTTGGCAAAATCGACATGCAACTCAAG
CTTGTCCCTGGCAATTCTGCCGGCACAGTCACCGCCTACTACTTAAAATC
ACCAGGATCAACATGGGATGAGATAGACTTCGAATTCTTGGGGAATTTAA
GTGGTGATCCTTATACTCTTCATACTAATGTGTTCACAAATGGCAAAGGT
GACAGAGAGCAACAATTCCACCTCTGGTTTGACCCCACTGCTGACTTTCA
CACCTATTCCGTTCTCTGGAATCCCCAACGTATTGTCTTCTATGTTGATG
GCTCGCCAATTAGAGAGTTCAAGAACTTGGAATCAAACGGCGTACTCTTT
CCCAAAAACCAGCCGATGAGGATTTACTCGAGTCTCTGGAACGCCGATGA
CTGGGCCACGAGAGGTGGCCTTATCAAAACTGACTGGACCCAAGCTCCCT
TCACTGCTTCTTACAAAAACTT
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