CF836142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836142 vs. ExPASy Swiss-Prot
Match: RS19_EMENI (40S ribosomal protein S19 OS=Emericella nidulans GN=rps19 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.426e-34 Identity = 69/131 (52.67%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 179 VKDVSPHEFVKAYAAHFKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELD-SKGGRRITSSGQRDLDQVA 568 V+DV +F+ AYAA KR GK+ +P W D VKT EL P D DWYY+RAA++AR IYLR +GVG R+++G K GSRP H +SG+V R +L L+ ++E D KGGRRIT SGQRDLD++A Sbjct: 6 VRDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYLRKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRDLDRIA 136
BLAST of CF836142 vs. ExPASy Swiss-Prot
Match: RS19S_ASCSU (40S ribosomal protein S19S OS=Ascaris suum GN=RPS19S PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.231e-33 Identity = 66/135 (48.89%), Postives = 93/135 (68.89%), Query Frame = -3 Query: 170 NVKDVSPHEFVKAYAAHFKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG-GRRITSSGQRDLDQVAGRI 571 +VKDV HE V+ A K+SGK+++P W+D+VK G KELAP D DWYY+R AS+AR++Y+R GVG+ RR+YGG KR G P HF+++SGSV R L L+ +E G GR +T G++DLD++A ++ Sbjct: 6 SVKDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDGNGRILTKQGRKDLDRIASQM 140
BLAST of CF836142 vs. ExPASy Swiss-Prot
Match: RS19A_DROME (40S ribosomal protein S19a OS=Drosophila melanogaster GN=RpS19a PE=2 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 3.582e-33 Identity = 65/133 (48.87%), Postives = 88/133 (66.17%), Query Frame = -3 Query: 170 VKDVSPHEFVKAYAAHFKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRI 568 VKD+ H KA A K++GK+++P DIVKT KELAPYDPDW+Y+R AS+ R +Y R GVGS +IYGG KRNG P HF +++ AR L L+ ++E GGR+++S GQRDLD++A +I Sbjct: 6 VKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRIANQI 138
BLAST of CF836142 vs. ExPASy Swiss-Prot
Match: RS19_ENTHI (40S ribosomal protein S19 OS=Entamoeba histolytica GN=RPS19 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.505e-31 Identity = 66/138 (47.83%), Postives = 90/138 (65.22%), Query Frame = -3 Query: 173 METAKNVKDVSPHEFVKAYAAHFKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGR 586 M N+KDV +F+KAYA H K+SGK+E+P W D VKTG KELAP +PDW YIRAA++ARK+YL G+GV + RR YG P H + SG V R+IL QL+ I+ + GR +T G++D+D++A + Sbjct: 1 MHHFSNIKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVG-KIQSGRSLTKEGRKDMDKIASK 137
BLAST of CF836142 vs. ExPASy Swiss-Prot
Match: RS19G_ASCSU (40S ribosomal protein S19G OS=Ascaris suum GN=RPS19G PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.719e-31 Identity = 64/140 (45.71%), Postives = 92/140 (65.71%), Query Frame = -3 Query: 170 METAKNVKDVSPHEFVKAYAAHFKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG-GRRITSSGQRDLDQVAGRI 586 M A +VKDV HE V+ A K+SGK+++P W+D+ K G KELAP + DWYY+R AS+AR++Y+R GV + R +YGG KR G P HF+K+SGSV R L L+ ++ G GR +T G++DLD++A ++ Sbjct: 1 MVKATSVKDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYVRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLTKQGRKDLDRIASQM 140
BLAST of CF836142 vs. ExPASy Swiss-Prot
Match: RS19_CAEEL (40S ribosomal protein S19 OS=Caenorhabditis elegans GN=rps-19 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.469e-31 Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = -3 Query: 179 METAKNVKDVSPHEFVKAYAAHFKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG-GRRITSSGQRDLDQVA 586 M A ++KDV HE K+ A K+SGK+++P W+D+VK G KELAP DPDW+Y RAAS+AR +Y R G+G+F+++YGG KR G P HF S+G+ R + QL+ +E G GR ++ G++DLD++A Sbjct: 1 MTRATSIKDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYFRPA-GIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRIA 136
BLAST of CF836142 vs. ExPASy Swiss-Prot
Match: RS19B_YEAST (40S ribosomal protein S19-B OS=Saccharomyces cerevisiae GN=RPS19B PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 6.323e-30 Identity = 62/134 (46.27%), Postives = 92/134 (68.66%), Query Frame = -3 Query: 173 NVKDVSPHEFVKAYAAHFKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGR 571 +V+DV+ +F+ AYA+ +R GK+E+P + DIVKT + E+ P D + W+Y RAAS+AR IY+R +GVG ++YGG K G RP +SGS+ R +L L+ I+E+ KGGRRI+ +GQRDLD++A + Sbjct: 5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIAAQ 138
BLAST of CF836142 vs. ExPASy Swiss-Prot
Match: RS19A_YEAST (40S ribosomal protein S19-A OS=Saccharomyces cerevisiae GN=RPS19A PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 6.323e-30 Identity = 62/134 (46.27%), Postives = 92/134 (68.66%), Query Frame = -3 Query: 173 NVKDVSPHEFVKAYAAHFKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGR 571 +V+DV+ +F+ AYA+ +R GK+E+P + DIVKT + E+ P D + W+Y RAAS+AR IY+R +GVG ++YGG K G RP +SGS+ R +L L+ I+E+ KGGRRI+ +GQRDLD++A + Sbjct: 5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIAAQ 138
BLAST of CF836142 vs. ExPASy Swiss-Prot
Match: RS19B_DROME (40S ribosomal protein S19b OS=Drosophila melanogaster GN=RpS19b PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 1.722e-27 Identity = 60/133 (45.11%), Postives = 81/133 (60.90%), Query Frame = -3 Query: 170 VKDVSPHEFVKAYAAHFKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRI 568 VK++ H K AA K+SGKI +P +KTG KE AP D DW+Y R AS+ R +YLR GVG+F ++Y G KRNG RP +SS R L L+ N++E GGR++T GQR+LD++A +I Sbjct: 6 VKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRIANKI 138
BLAST of CF836142 vs. ExPASy Swiss-Prot
Match: RS19E_METTH (30S ribosomal protein S19e OS=Methanobacterium thermoautotrophicum GN=rps19e PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.573e-23 Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = -3 Query: 170 VKDVSPHEFVKAYAAHFKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRI 568 V DV + A K K++ P W + VKTG KE P +PDW+Y+RAA++ R++Y+ G +GV S R YGG K GSRP F + SG++ R L QL+++ +I+ + + GR IT G+ LD+ A + Sbjct: 4 VYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKRE-ENGRVITPEGRSFLDKAAAEV 135 The following BLAST results are available for this feature:
BLAST of CF836142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836142 ID=CF836142; Name=CF836142; organism=Citrus sinensis; type=EST; length=618bpback to top |