CF836144

Overview
NameCF836144
Unique NameCF836144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1145 contig Csv1_Contig1145:15..741. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.018e-19
Identity = 65/186 (34.95%), Postives = 95/186 (51.08%), Query Frame = -1
Query:  171 NLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFN---GTGNPDPXXXXXXXXXXXXLCPQGGNGS--VLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRSSSDGG 713
            +LP P  T   L   F    L+   D+V LSGAHT GR+ C  F +R++N +    T   D             LCP     +  + T +D  TP+  DN+Y+  L    GL  SD +L   P      +V++F+SNET + E FA +M++MG + + TGT GE+R NC  VN +  S+ S+ + G
Sbjct:  170 DLPPPTSTAQSLTDLFKAKELSVE-DMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPITTAMDPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNP--QMAALVSSFASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNCGVVNPSLYSSSSAVELG 352          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.169e-18
Identity = 60/170 (35.29%), Postives = 80/170 (47.06%), Query Frame = -1
Query:  222 NLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNE------TAFFESFAVSMIRMGNLSLLTGTQGEIRSNC 713
            NLP+PF  +  LK  F N GLN   DLV LSG HT G + C   + RL+NF G G+ DP             CP     + L N+D  +   FD  YF  +    GL  SD  L      D I   N   +        ++F + F+ SM+++G + +LTG  GEIR  C
Sbjct:  159 NLPSPFADIKTLKKNFANKGLNAK-DLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCPPTDFRTSL-NMDPGSALTFDTHYFKVVAQKKGLFTSDSTLL-----DDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEIRKRC 321          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.994e-18
Identity = 62/175 (35.43%), Postives = 90/175 (51.43%), Query Frame = -1
Query:  210 SLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTG-NPDPXXXXXXXXXXXXLCPQGGNGSVLTNL-DLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 728
            SL    LP P   +  L  +F++ G +   ++VALSGAHT G + C+ F+ R+   N TG NP               C    N   ++   D+ TP+ FDN YF N+    GLL+SD  LFS P   T P V  ++ +++ FF  FA +M ++    +LTG +GEIR  C  +N
Sbjct:  163 SLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNP------RFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDP--RTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.604e-18
Identity = 58/169 (34.32%), Postives = 84/169 (49.70%), Query Frame = -1
Query:  222 ADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDP-XXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNF-SSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNC 722
            A  N+P P      L+  F N GLN   DLV LSGAHT G + C   + RL+NF+ T   DP              C    + S +  +D  +   FD  Y+  +    GL QSD  L  T  + T+ ++N+  + +E  FF++FA SM +MG + + TG+ G IR+ C
Sbjct:  159 ATNNIPPPTSNFTTLQRLFKNQGLNLK-DLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTILEMDPGSSRSFDLSYYRLVLKRRGLFQSDSAL--TTNSATLKVINDLVNGSEKKFFKAFAKSMEKMGRVKVKTGSAGVIRTRC 324          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17
Identity = 60/174 (34.48%), Postives = 78/174 (44.83%), Query Frame = -1
Query:  210 ADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVN---NFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 722
            +D NLP P  ++   K  F    LN   DLV L G HT G A C     R  NFNGTG PDP             CPQ  NG     LD  + D FD  +   + ++  +LQSD  L+  P  +T  I+            F   F  SM++M  + + TG+ GEIR  C  +N
Sbjct:  163 SDVNLPGPSDSVAKQKQDFAAKTLN-TLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQ--NGGTRVELDEGSVDKFDTSFLRKVTSSRVVLQSDLVLWKDP--ETRAIIERLLGLRRPSLRFGTEFGKSMVKMSLIEVKTGSDGEIRRVCSAIN 331          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17
Identity = 63/173 (36.42%), Postives = 84/173 (48.55%), Query Frame = -1
Query:  198 NLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQ-GGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNL 713
            NLP   Q++  +   F   G     +LVALSG HT G + C+ FS R+F        DP            LC     N ++   LD  TP  FDN YF NL+   GLL SD  LF  P   T P V  +++N+TAFFE FA +M ++G + +     GE+R  C   N  N+
Sbjct:  162 NLPLANQSVPDMLSIFKKNGFTLK-ELVALSGGHTIGFSHCKEFSNRIFP-----KVDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNLKRGLGLLASDHILFKDPS--TRPFVELYANNQTAFFEDFARAMEKLGRVGVKGEKDGEVRRRCDHFNKLNV 326          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17
Identity = 58/209 (27.75%), Postives = 90/209 (43.06%), Query Frame = -1
Query:  201 ADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCP--------------------------------QGGNGSVLTNLDLSTPDG---FDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANN 722
            A+  LP P  TL ++  RF+  G N+  + V+L GAH+ G   C FF  RL+NF+ TG PDP             CP                                 G     + +L  +   G   F   YF  L  N GL+ SDQ+L  +   +    V  ++S+   F   FA+SM+++ + ++LTG  G++R++C +    N
Sbjct:  199 AEHELPAPDATLSVILQRFSFRGFNER-ETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGSEVTEM--WVRAYASDPLLFRREFAMSMMKLSSYNVLTGPLGQVRTSCSKALPRN 404          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17
Identity = 58/170 (34.12%), Postives = 74/170 (43.53%), Query Frame = -1
Query:  210 LPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNP---DPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 710
            LP P      L   F    L D  DLV LS  HT G + C  F+ RL+NF G  N    DP             C    + + L  +D  +   FD  YF N+    GL  SD EL +          +     +  FF  FA SM++MG + +LTG+QGEIR  C  VN
Sbjct:  158 LPPPTANFTELTQMFAAKNL-DLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEMDPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKCNVVN 326          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 54/174 (31.03%), Postives = 85/174 (48.85%), Query Frame = -1
Query:  210 QNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFF-----ESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 716
            +++P    ++++LK +F   GLN   DLV LS AHT G   C F S+RL++F   G PDP             CPQ G+ +V   +D  +   FD     N++    +LQ+D  L+      T  +V+++      FF       F  ++++MG + + TG +GEIR  C   N
Sbjct:  156 KDMPEVSDSIEILKAKFMQKGLNAK-DLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQNGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLYE--DVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKIGVKTGFKGEIRRVCSAFN 326          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16
Identity = 58/172 (33.72%), Postives = 84/172 (48.84%), Query Frame = -1
Query:  198 NLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNL 713
            N+P   QT+  + G F   G +   ++VALSGAHT G + C+ FS RL+        +P                  + ++    D+ TP  FDN YF NL+   GLL SD  L       T P V+ +++NETAFFE FA +M ++G + +     GE+R  C   N  N+
Sbjct:  169 NVPMANQTVPDIHGIFKKNGFSLR-EMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTV---DDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNS--TKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDHFNNLNV 334          
The following BLAST results are available for this feature:
BLAST of CF836144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER1_MAIZE4.018e-1934.95Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER1_ARATH1.169e-1835.29Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER63_ARATH1.994e-1835.43Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER30_ARATH2.604e-1834.32Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER69_ARATH1.293e-1734.48Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER41_ARATH1.688e-1736.42Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER48_ARATH2.205e-1727.75Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER1_ORYSJ2.205e-1734.12Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER43_ARATH3.761e-1731.03Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER65_ARATH1.094e-1633.72Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H20_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836144 ID=CF836144; Name=CF836144; organism=Citrus sinensis; type=EST; length=728bp
TTTTTTTTTTTTTTTTCCAACGGGCTCATAATTTTATTCAGATTCCGAAT
AATATTGTTAGGACAAACACGAGACAAGGTACATGAGTTTGTTACCCACA
AACTCTCAACAGCAAAACTACTTCACACAGTTTTATTTTATGCTTTCATG
ATTTAGATAGAGCTGACCAAACCGCCATCTGATGATGATCTGGTTGATAA
ATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATCTCTCCTTGAGTCC
CTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGAAACCGCAAAGCTT
TCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGACAATGGGAATGGT
ATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTCTGTAAAAGGCCAT
TGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAAACCATCCGGTGTT
GAGAGATCAAGATTCGTTAGGACGCTGCCATTGCCACCTTGCGGGCACAG
CTGCTGCAGTTGTGCTAAGAGAGTTGCGTTCAGCGTTGGGTCTGGATTGC
CAGTTCCATTGAAATTGAATAATCTTTGGCTGAAAAATTGACACTGTGCC
CTTCCAAAAGTGTGAGCGCCGGAGAGTGCAACCAGATCAGTATTGTCGTT
GAGACCGACATTTGTAAATCTGCCTTTGAGCAAATCAAGAGTCTGAAATG
GTGTTGGAAGATTCTGATCTGCAAGGCT
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