CF836144

Overview
NameCF836144
Unique NameCF836144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1145 contig Csv1_Contig1145:15..741. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16
Identity = 59/171 (34.50%), Postives = 77/171 (45.03%), Query Frame = -1
Query:  210 ADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 722
            A+  LP PF  L +   +F + G N   ++V L+GAHT G ++C        N N   +                CP   N + L  LD S P  FD  YF  L    GLL SDQEL  +    T+  V  +     AF   FA +M++M NL    G Q EIR+ C RVN
Sbjct:  193 ANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHTVGFSRCAVLCTST-NLNQNRSAT----------LQCTCPASANDTGLVGLDPS-PGTFDKKYFEELVKGQGLLFSDQELMQSNA--TVTAVRRYRDATGAFLTDFAAAMVKMSNLPPSAGVQLEIRNVCSRVN 348          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.430e-16
Identity = 58/173 (33.53%), Postives = 82/173 (47.40%), Query Frame = -1
Query:  213 SLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGN-GSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRV 728
            ++  + LP P   +  L+  F   GL+ + DLVALSG HT G A C  F  RL  FN     DP            +CP      +  +N+D  T   FDN Y+  L     L  SD+ L + P   T  +V  ++++   F  +F  SMI+M ++S   G   E+R NCRRV
Sbjct:  151 AIETRQLPAPTFNISQLRQNFGQRGLSMH-DLVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEGVCPAHNTVKNAGSNMD-GTVTSFDNIYYKMLIQGKSLFSSDESLLAVP--STKKLVAKYANSNEEFERAFVKSMIKMSSIS---GNGNEVRLNCRRV 316          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 60/174 (34.48%), Postives = 83/174 (47.70%), Query Frame = -1
Query:  210 QNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGN-----GSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 716
            +NLP P   +  L   F   GL+   D+V LSG HT G + C  F  RL NF+   + DP             CP+  N     G+VL     ST   FDN Y+  + +  G+  SDQ L     + T  IV  F+ ++ AFF  FA SM+++GN  +     G++R N R VN
Sbjct:  158 RNLPPPTFNVSQLIQSFAARGLSVK-DMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLD----STSSVFDNVYYKQILSGKGVFGSDQALLG--DSRTKWIVETFAQDQKAFFREFAASMVKLGNFGV--KETGQVRVNTRFVN 322          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 62/177 (35.03%), Postives = 84/177 (47.46%), Query Frame = -1
Query:  192 ADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLST 722
            A   LP P   L +   +F++       ++VAL+GAHT G A+C            +GN +P             C      S L  LD +TP  FD  Y+ NL  N G++ SDQ L  T    T   V  +S+N T F E FA +MI+MGNL    G Q EIR  C RVN  ++++
Sbjct:  203 AINQLPAPSDNLTVQIQKFSDKNFTVR-EMVALAGAHTVGFARCSTVCT-------SGNVNPAAQLQCN------CSATLTDSDLQQLD-TTPAVFDKVYYDNLNNNQGIMFSDQVL--TGNTTTAGFVTTYSNNVTVFLEDFAAAMIKMGNLPPSAGAQLEIRDVCSRVNPTSVAS 362          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.580e-15
Identity = 58/172 (33.72%), Postives = 82/172 (47.67%), Query Frame = -1
Query:  210 QNLPTPFQTLDLLKGRFTNVGLNDNTDLVALS-GAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTI--PIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 716
            +NLP    +++ LK +F   GL+D  DLV LS GAHT G   C F   RL   + T NP+              CPQGG+ +V   LD  +   FDN  F N++   G++ SD  L+       I    +    S++  F   F  +MI+MG + +  G +GEIR  C   N
Sbjct:  155 KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRLDAQDPTINPE------FFQILRSKCPQGGDVNVRIPLDWDSQFVFDNQIFQNIKNGRGVILSDSVLYQDNNMKKIIDSYLETNQSSKANFAADFTKAMIKMGAIGVKIGAEGEIRRLCSATN 319          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.695e-15
Identity = 53/167 (31.74%), Postives = 83/167 (49.70%), Query Frame = -1
Query:  210 LPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 710
            L  P  T+D +   F + GL    ++VAL GAHT G + C+ F+ R+FN +    P                    +  +    D+ TP  FDN Y+ NL+   GLLQSD  +       T  +V+ ++ +ETAFF++FA +M ++   ++ TG  GE+R  C + N
Sbjct:  159 LARPNMTMDHIISIFESSGLTVQ-EMVALVGAHTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAFNDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNR--TRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCDQYN 322          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.004e-15
Identity = 53/164 (32.32%), Postives = 80/164 (48.78%), Query Frame = -1
Query:  210 TLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGN---PDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 692
            TLD +   F++ GL+   DLV LSGAHT G + C  F+ R F  +  GN    D              C    + S+  + D  T   FDN Y+ NL+ + GL Q+D  L       T+  V   +S+E +FF+ ++ S +++  + +  G  GEIR +C  VN
Sbjct:  167 TLDQMIDAFSSKGLSIQ-DLVVLSGAHTIGASHCNAFNGR-FQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVSNDPETSAVFDNQYYRNLETHKGLFQTDSALMEDNRTRTM--VEELASDEESFFQRWSESFVKLSMVGVRVGEDGEIRRSCSSVN 326          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.004e-15
Identity = 60/177 (33.90%), Postives = 86/177 (48.59%), Query Frame = -1
Query:  192 ADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLST 722
            A   LP PF  L +   +F++       ++VAL+GAHT G A+C            +GN +P             C      S L  LD +TP  FD  Y+ NL +N G++ SDQ L  T  A T   V ++S++   F   FA +MI+MG+L    G Q EIR  C RVN  ++++
Sbjct:  204 AINQLPAPFDNLTVQIQKFSDKNFTLR-EMVALAGAHTVGFARCSTVCT-------SGNVNPAAQLQCN------CSATLTDSDLQQLD-TTPTMFDKVYYDNLNSNQGIMFSDQVL--TGDATTAGFVTDYSNDVNVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVNPTSVAS 363          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 57/173 (32.95%), Postives = 85/173 (49.13%), Query Frame = -1
Query:  210 SLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 728
            SL    LP P   +  +  +F + G     ++VALSGAH+ G + C+ F  R+   N   NP                P+    SV    D+ TP+ FDN Y+ NL+   GLL+SD  L+S P   T   V+ ++ N+  FF+ FA +M ++    + TG +GEIR  C  +N
Sbjct:  152 SLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHSIGFSHCKEFVGRVGRNNTGYNP---RFAVALKKACANYPKDPTISVFN--DIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDP--RTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of CF836144 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 59/173 (34.10%), Postives = 84/173 (48.55%), Query Frame = -1
Query:  192 LPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLST 710
            LP PF  L +   +F +       ++VAL+GAHT G A+C            +GN +P             C      S L  LD +TP  FD  Y+ NL  N G++ SDQ L  T  A T   V ++S++ + F   FA +MI+MG+L    G Q EIR  C RVN  ++++
Sbjct:  207 LPAPFDNLTVQIQKFNDKNFTLR-EMVALAGAHTVGFARCSTVCT-------SGNVNPAAQLQCN------CSATLTDSDLQQLD-TTPTMFDKVYYDNLNNNQGIMFSDQVL--TGDATTAGFVTDYSNDVSVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVNPTSVAS 362          
The following BLAST results are available for this feature:
BLAST of CF836144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PERN_IPOBA3.184e-1634.50Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER64_ARATH5.430e-1633.53Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER66_ARATH7.092e-1634.48Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER2_SOLLC9.263e-1635.03Suberization-associated anionic peroxidase 2 OS=So... [more]
PER13_ARATH1.580e-1533.72Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER6_ARATH2.695e-1531.74Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER46_ARATH6.004e-1532.32Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER1_SOLLC6.004e-1533.90Suberization-associated anionic peroxidase 1 OS=So... [more]
PER31_ARATH7.841e-1532.95Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PERX_SOLTU1.747e-1434.10Suberization-associated anionic peroxidase OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H20_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836144 ID=CF836144; Name=CF836144; organism=Citrus sinensis; type=EST; length=728bp
TTTTTTTTTTTTTTTTCCAACGGGCTCATAATTTTATTCAGATTCCGAAT
AATATTGTTAGGACAAACACGAGACAAGGTACATGAGTTTGTTACCCACA
AACTCTCAACAGCAAAACTACTTCACACAGTTTTATTTTATGCTTTCATG
ATTTAGATAGAGCTGACCAAACCGCCATCTGATGATGATCTGGTTGATAA
ATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATCTCTCCTTGAGTCC
CTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGAAACCGCAAAGCTT
TCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGACAATGGGAATGGT
ATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTCTGTAAAAGGCCAT
TGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAAACCATCCGGTGTT
GAGAGATCAAGATTCGTTAGGACGCTGCCATTGCCACCTTGCGGGCACAG
CTGCTGCAGTTGTGCTAAGAGAGTTGCGTTCAGCGTTGGGTCTGGATTGC
CAGTTCCATTGAAATTGAATAATCTTTGGCTGAAAAATTGACACTGTGCC
CTTCCAAAAGTGTGAGCGCCGGAGAGTGCAACCAGATCAGTATTGTCGTT
GAGACCGACATTTGTAAATCTGCCTTTGAGCAAATCAAGAGTCTGAAATG
GTGTTGGAAGATTCTGATCTGCAAGGCT
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