CF836145

Overview
NameCF836145
Unique NameCF836145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.698e-25
Identity = 68/176 (38.64%), Postives = 99/176 (56.25%), Query Frame = 2
Query:  110 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVAND--TSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDG-RTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            L+  +Y  TCP    I+   L + F  D    A+L+RL FHDC V GCD SILL+ + +   T +DS K     N   R  ++V ++K +LE  CP  VSC+D++ +A+  +V L+GGP  +VPLGR+D   T ++ +AD  LP     +D     F N G+    + VA+ GAHT
Sbjct:   38 LSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAK-----NFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIE-ESVAIMGAHT 207          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.218e-25
Identity = 71/182 (39.01%), Postives = 98/182 (53.85%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILL-DNVANDTSIDSEKFSMANNNSARG--FEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S+  A L  D+Y  TCP+   I+   +           A  +RL FHDCF+ GCD S+L+  N  N    D +      N+S  G  F++V  +K ALE +CPG+VSCADILA A+   V + GGP + V LGR+DG  +       N+P   QT+  + G F   G +   ++VALSGAHT
Sbjct:   27 SADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDL-----NDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFS-LREMVALSGAHT 202          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.941e-25
Identity = 70/182 (38.46%), Postives = 95/182 (52.20%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILL-DNVANDTSIDSEKFSMANNNSARG--FEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S+    LT D+Y  TCP+ + I+   +           A  +RL FHDCF+ GCD S+L+  N  N    D +      N S  G  F++V  +K ALE +CPG+VSCADILA A+   V + GGP + V LGR+DG  +       NLP   Q++  +   F   G     +LVALSG HT
Sbjct:   20 SAPPPNLTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDDDL-----NESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFT-LKELVALSGGHT 195          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.438e-24
Identity = 69/182 (37.91%), Postives = 98/182 (53.85%), Query Frame = 2
Query:   95 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNV-ANDTSID-SEKFSMANNNSARGFEVVDAMKAALES--ACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            ++ AQL  +FY  +CPN   I+  V+Q           + +RL FHDCFVNGCD S+++ +   N    D  +  S+A +    GF+VV   K AL++  +C   VSCADILA+A+   V  + GPS+ V LGR DG  +  +  + NLP P   +  L   F    L    D++ALS AHT
Sbjct:   22 TTTAQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGD----GFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQE-DMIALSAAHT 198          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.463e-24
Identity = 65/173 (37.57%), Postives = 97/173 (56.07%), Query Frame = 2
Query:  110 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            L+ ++Y+  CP+   I++  ++    SD  +  +L+RL FHDC V GCD S+LLD    +    + K       + RGFE++D +K+ +E +CPG VSCADIL  AS  +    GGP W    GRRD + +     ++ +P+  + +  L   F + GLN   DLV LSGAHT
Sbjct:   51 LSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEGTERRSPASK-------TLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEK-VPSGRRDVTALLETFQSYGLN-VLDLVVLSGAHT 214          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.030e-22
Identity = 60/176 (34.09%), Postives = 93/176 (52.84%), Query Frame = 2
Query:  101 QAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            QA L+ D+Y  TCP     ++ ++ +   +        +RL FHDC V+GCD SIL+ +    TS      + +    A  F+V+  +K A+E  CP IVSC+DIL  A+   +++ GGP   V  GR+D   ++ +  +  L  P  T+D +   F + GL    ++VAL GAHT
Sbjct:   19 QANLSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDA--FDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQ-EMVALVGAHT 191          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.030e-22
Identity = 56/179 (31.28%), Postives = 94/179 (52.51%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            + ++  L  +FY  TCP A +I+   ++  +        S +R  FHDC V  CD S+LLD+   +        S       R F  ++ +K ALE  CPG+VSC+DIL +++ + +   GGP   +  GRRDG  +   + +  LP   +++ ++  +F ++G+ D   LVAL G+H+
Sbjct:   25 TEAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFG----LRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGI-DTPGLVALLGSHS 198          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.223e-17
Identity = 56/175 (32.00%), Postives = 84/175 (48.00%), Query Frame = 2
Query:  107 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPS-WTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            +L  ++Y  +CP A  II   ++  +        S +R  FHDC V  CD S+LL+      S    K S       R F+ V  +K ALE  CP  VSCADI+A+++   + +  GP    +  GRRD R +     +  +P    +L  +   F ++G+ D    VAL GAH+
Sbjct:   29 ELEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSF----GMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGI-DVEATVALLGAHS 198          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PERX_WHEAT (Peroxidase (Fragment) OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.142e-13
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 2
Query:  338 RGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLP 532
            RGF V+D++K  +E+ C   VSCADIL +A+  SV   GGPSWTVPLGRRD   AN + A+ +LP
Sbjct:    3 RGFGVIDSIKTQIEAICNQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANEAEANSDLP 67          
The following BLAST results are available for this feature:
BLAST of CF836145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER29_ARATH1.698e-2538.64Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER65_ARATH2.218e-2539.01Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER41_ARATH4.941e-2538.46Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER73_ARATH1.438e-2437.91Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER7_ARATH5.463e-2437.57Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER6_ARATH1.030e-2234.09Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER42_ARATH1.030e-2231.28Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH2.223e-1732.00Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PERX_WHEAT1.142e-1355.38Peroxidase (Fragment) OS=Triticum aestivum PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836145 ID=CF836145; Name=CF836145; organism=Citrus sinensis; type=EST; length=632bp
CAACACTCACTACATTTCTCTTCAAAGGAAAATGTCTCCTCTTCGTTATC
TTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACGAATCATCATCT
CAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGCATC
AAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCCGAA
TCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAACGGC
TGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCATAGA
CAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCGAAG
TTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATTGTT
TCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTTGTC
AGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGACAG
CGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACTCTT
GATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATACTGA
TCTGGTTGCACTCTCCGGCGCTCACACTTTTG
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