CF836145

Overview
NameCF836145
Unique NameCF836145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.633e-44
Identity = 88/169 (52.07%), Postives = 117/169 (69.23%), Query Frame = 2
Query:  122 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            FY+ +CP    I+   +  AF  D RI ASL+RLHFHDCFVNGCDGSILL++         EK +  N NS RGFEV++ +K+ +ES+CP  VSCADI+A+A+ ++V L+GGP W VPLGRRD  TA+   A+ NLP+PF+ L+ +  +F  +GL D  D+V LSGAHT
Sbjct:   52 FYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLND---SEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGL-DLKDVVVLSGAHT 216          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.639e-44
Identity = 92/177 (51.98%), Postives = 118/177 (66.67%), Query Frame = 2
Query:   98 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S   L P FY+ +CP A  I+  ++  AF  D R+ ASL+RLHFHDCFV GCD SILLD+     +I SEK S  N NSARGFE+++ +K ALE  CP  VSCADILA+A+  S  ++GGPSW VPLGRRD R A+ S ++ ++P P  T   +  +F   GL D  DLV+LSG+HT
Sbjct:   29 SGGYLFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSG---TIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGL-DLVDLVSLSGSHT 201          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.639e-44
Identity = 95/177 (53.67%), Postives = 125/177 (70.62%), Query Frame = 2
Query:   98 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            SQAQL+P FY+ TC NA + I   ++ A + + R+ ASLIRLHFHDCFVNGCD S++L  VA  T ++SE+ S+AN  SARGFEV+D  K+A+ES CPG+VSCADI+A+A+  +    GGP + V +GRRD   A R++AD++LP    +L+ L   F   GLN   DLVALSGAHT
Sbjct:   17 SQAQLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVML--VATPT-MESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLN-TRDLVALSGAHT 189          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 8.107e-44
Identity = 93/175 (53.14%), Postives = 117/175 (66.86%), Query Frame = 2
Query:  104 AQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            AQL+ +FY T CPNA + I   + +A   + R+ ASL+RLHFHDCFV GCD S+LLD+ +N T    EK +  N NS RGFEV+D +K+ +ES CPG+VSCADILA+A+  SV   GG SW V LGRRD  TA+ S A+ +LP PF  L  L   F+N G     +LV LSGAHT
Sbjct:   22 AQLSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTG---EKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFT-TKELVTLSGAHT 192          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.359e-43
Identity = 89/178 (50.00%), Postives = 123/178 (69.10%), Query Frame = 2
Query:   95 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            SS AQL+ +FY+ TCP   + +   +Q+A + + R+ ASL+RL FHDCFVNGCD S+LLD+ ++ T    E+ ++ N NS RG  V+D +K+ +ES CPG+VSCADI+AIA+  SV + GGP W V LGRRD +TA+ S A+ N+P P  +L  L  +F   GL+   D+VALSGAHT
Sbjct:   22 SSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTG---EQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLS-TRDMVALSGAHT 195          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.081e-43
Identity = 96/180 (53.33%), Postives = 119/180 (66.11%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQN-LPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S S+AQL  DFY  +CP+   ++  V++ A   + R+ ASL+RL FHDCFVNGCDGS+LLD+     S   EK S  +NNS RGFEV+D +K  +E  CPGIVSCADILAI +  SV L GGP W+V LGRRD  TAN + A+   +P P  TL  L  RF   GL+   D+VALSGAHT
Sbjct:   15 SQSEAQLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTP---SFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLS-TRDMVALSGAHT 190          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.997e-42
Identity = 94/179 (52.51%), Postives = 117/179 (65.36%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S++ AQL+  FY+T+CPNA + I   +  A NS+ R+ ASL+RLHFHDCFV GCD S+LL           E+ +  N  S RGF VVD +K  +E+ C   VSCADILA+A+  SV   GGPSWTV LGRRD  TAN S A+ +LP P  +L  L G F+  GL D TD+VALSGAHT
Sbjct:   19 SAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG--------QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHT 188          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 1.997e-42
Identity = 94/179 (52.51%), Postives = 117/179 (65.36%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S++ AQL+  FY+T+CPNA + I   +  A NS+ R+ ASL+RLHFHDCFV GCD S+LL           E+ +  N  S RGF VVD +K  +E+ C   VSCADILA+A+  SV   GGPSWTV LGRRD  TAN S A+ +LP P  +L  L G F+  GL D TD+VALSGAHT
Sbjct:   19 SAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG--------QEQNAGPNAGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHT 188          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.406e-42
Identity = 96/180 (53.33%), Postives = 118/180 (65.56%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQN-LPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S +QAQL  DFY+ +CP+    +  V+Q     + RI ASL+RL FHDCFVNGCD SILLD+     S   EK +  NNNS RG+EV+DA+K+ +E  CPG+VSCADILAI +  SV L GG  W+V LGRRD  TA+ S A+   LP P  TLD L   F   GL+   D+VALSGAHT
Sbjct:   24 SQAQAQLRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTR---SFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPR-DMVALSGAHT 199          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 5.810e-42
Identity = 85/168 (50.60%), Postives = 113/168 (67.26%), Query Frame = 2
Query:  125 YNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            Y  +CP A +I+   ++     D R+ ASL+RLHFHDCFVNGCD S+LLD+      +  EK +  N NS RGFEV+D++K+ +ES CP  VSCADILA+A+  SV +SGGP W V +GR+D RTA++  A   LP+P  T+  L   F N+GL+  TD+VALSG HT
Sbjct:   55 YRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEG---LVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLS-QTDMVALSGGHT 218          
The following BLAST results are available for this feature:
BLAST of CF836145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER10_ARATH1.633e-4452.07Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER72_ARATH3.639e-4451.98Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER4_ARATH3.639e-4453.67Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER1_ARAHY8.107e-4453.14Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER4_VITVI2.359e-4350.00Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER67_ARATH3.081e-4353.33Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER2_ORYSJ1.997e-4252.51Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI1.997e-4252.51Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER68_ARATH3.406e-4253.33Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER40_ARATH5.810e-4250.60Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836145 ID=CF836145; Name=CF836145; organism=Citrus sinensis; type=EST; length=632bp
CAACACTCACTACATTTCTCTTCAAAGGAAAATGTCTCCTCTTCGTTATC
TTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACGAATCATCATCT
CAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGCATC
AAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCCGAA
TCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAACGGC
TGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCATAGA
CAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCGAAG
TTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATTGTT
TCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTTGTC
AGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGACAG
CGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACTCTT
GATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATACTGA
TCTGGTTGCACTCTCCGGCGCTCACACTTTTG
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