CF836145

Overview
NameCF836145
Unique NameCF836145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 9.910e-42
Identity = 91/180 (50.56%), Postives = 120/180 (66.67%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQ-NLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S  QAQL+P FY+ +C NA + I   ++ A   + R+ ASLIR+HFHDCFV+GCD SILL+  +   +I+SE+ ++ N  S RGFEV+D  K+ +E  CPGIVSCADI+A+A+  +    GGP W V +GRRD   A ++LA+   LP    TLD L G F+  GLN   DLVALSGAHT
Sbjct:   20 SICQAQLSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTS---TIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLN-TRDLVALSGAHT 195          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.294e-41
Identity = 92/177 (51.98%), Postives = 116/177 (65.54%), Query Frame = 2
Query:   98 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            + AQL+P FY+ +CP A   I   +  A   + R+ ASL+RLHFHDCFV GCDGS+LL++ A  T    E+ +  N  S RGF VVD +KA +E+ CPG+VSCADILA+A+  SV   GGPSW V LGRRD  TA+ +LA+ +LP P   L  L   F    L+  TDLVALSGAHT
Sbjct:   23 ASAQLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTG---EQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLS-RTDLVALSGAHT 195          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.294e-41
Identity = 85/176 (48.30%), Postives = 117/176 (66.48%), Query Frame = 2
Query:  101 QAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            QAQL  +FY  +CPNA  I+   + N  ++   + A+LIR+HFHDCFV GCDGS+L+++ + +   D+       N + RGF  +DA+K+ LE+ CPGIVSCADI+A+AS  +V  +GGP+W+VP GRRDGR +N + A  N+P P   +  L+  F N GL D  DLV LSGAHT
Sbjct:   23 QAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGNAERDATP-----NLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGL-DLKDLVLLSGAHT 192          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.918e-41
Identity = 88/177 (49.72%), Postives = 115/177 (64.97%), Query Frame = 2
Query:   98 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S+AQL   FY+ TCP A  I+  V+    N+   + A LIR+HFHDCFV GCDGSIL++  +++  +  EK +  N  + RGF+ +D +K+ALES CPGIVSCADI+ +A+  S+   GGP+W VP GRRDGR +N + A  N+P PF     L   F N GL D  DLV LSGAHT
Sbjct:   21 SEAQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQV--EKLAPPNL-TVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGL-DVKDLVLLSGAHT 193          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.431e-40
Identity = 88/177 (49.72%), Postives = 122/177 (68.93%), Query Frame = 2
Query:   98 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S A L   FY+ TCP A +I+  V+  A  SD  + A L+RLHFHDCFV GCDGSIL++N A      SEK +  +    RGFE+V+A+KA LE+ACPG+VSC+DI+A+A+  +++L+ GP++ VP GRRDGR +N SLA +++P    ++++LK +F   GLN   DLV LS AHT
Sbjct:   22 SLANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGAI-----SEKNAFGHEG-VRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLA-KDMPEVSDSIEILKAKFMQKGLNAK-DLVLLSAAHT 190          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.869e-40
Identity = 85/178 (47.75%), Postives = 114/178 (64.04%), Query Frame = 2
Query:   95 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            SS+AQL  +FY  +CPNA  II   +QN  ++   + A LIR+HFHDCFV GCDGS+L+++ + +   D+       N + RGF  V+ +KA LE  CP  VSCADI+A+ +  +V  +GGPSW+VP GRRDGR +N++ A  N+P P      L+  F N GLN   DLV LSGAHT
Sbjct:   24 SSEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGNAERDAPP-----NLTLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLN-LKDLVLLSGAHT 195          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.438e-40
Identity = 82/170 (48.24%), Postives = 106/170 (62.35%), Query Frame = 2
Query:  119 DFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            D+Y + CP A  I+ GV     +    + A L+R+HFHDCFV GCDGS+LL +  ND   D+       N + +G+EVVDA K ALE  CP ++SCAD+LA+ +  +V + GGP W VPLGRRDGR +  + A  NLP+PF  +  LK  F N GLN   DLV LSG HT
Sbjct:   29 DYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKNDAERDA-----VPNLTLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAK-DLVVLSGGHT 192          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.211e-39
Identity = 84/169 (49.70%), Postives = 112/169 (66.27%), Query Frame = 2
Query:  122 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            FY T+C  A  I+   ++  F  D  +   L+R+HFHDCFV GCDGS+L+D+  ++T+   EK S ANN S RGFEV+D+ KA LE+ C G+VSCADI+A A+  SV ++GG  + VP GRRDGR +  S A  NLP P  T+D L   F+N GL  + ++V LSGAHT
Sbjct:   65 FYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTA---EKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQD-EMVTLSGAHT 229          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.699e-39
Identity = 85/169 (50.30%), Postives = 110/169 (65.09%), Query Frame = 2
Query:  122 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            FY+ TCP A +I+   +++  NSD  + A ++R+HFHDCFV GCDGSIL+   A      +EK + AN    RG+E++D  K  LE+ACPG+VSCADILA+A+  SV LSGG SW VP GRRDGR +  S    NLP P  ++D+ K +F   GLN   DLV L G HT
Sbjct:   36 FYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPA------TEKTAFANLG-LRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDV-SNLPAPSDSVDVQKQKFAAKGLN-TQDLVTLVGGHT 195          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.699e-39
Identity = 82/181 (45.30%), Postives = 113/181 (62.43%), Query Frame = 2
Query:   86 DESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            D       LT D+Y +TCP   ++I   ++     D R  A +IRLHFHDCFV GCDGS+LLD      ++  EK +  N NS +G+++VD +K  +ES CPG+VSCAD+L I +  +  L GGP W VP+GR+D +TA+  LA  NLPTP + L  +  +F + GL+   D+VAL GAHT
Sbjct:   22 DTPGKDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETE---TLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVE-DMVALIGAHT 198          
The following BLAST results are available for this feature:
BLAST of CF836145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER5_ARATH9.910e-4250.56Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER70_MAIZE1.294e-4151.98Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER3_ARATH1.294e-4148.30Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER39_ARATH4.918e-4149.72Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER43_ARATH1.431e-4049.72Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER30_ARATH1.869e-4047.75Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER1_ARATH5.438e-4048.24Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER5_VITVI1.211e-3949.70Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER2_ARAHY2.699e-3950.30Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER11_ARATH2.699e-3945.30Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02H20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836145 ID=CF836145; Name=CF836145; organism=Citrus sinensis; type=EST; length=632bp
CAACACTCACTACATTTCTCTTCAAAGGAAAATGTCTCCTCTTCGTTATC
TTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACGAATCATCATCT
CAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGCATC
AAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCCGAA
TCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAACGGC
TGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCATAGA
CAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCGAAG
TTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATTGTT
TCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTTGTC
AGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGACAG
CGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACTCTT
GATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATACTGA
TCTGGTTGCACTCTCCGGCGCTCACACTTTTG
back to top