CF836145

Overview
NameCF836145
Unique NameCF836145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.933e-34
Identity = 78/169 (46.15%), Postives = 104/169 (61.54%), Query Frame = 2
Query:  122 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            FY+  CP A  I+   +  A  +D  I A L+R+ FHDCFV GC+GS+LL+      +   EK S+ N  + RGFE++D +KAALE  CPGIVSC+D+LA+ +  ++    GPSW V  GRRDG   N + A  NLP+PF  +  L  +F + GL D  DLV LSG HT
Sbjct:   36 FYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLEL----KNKKDEKNSIPNL-TLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGL-DKKDLVVLSGGHT 198          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.297e-33
Identity = 73/180 (40.56%), Postives = 112/180 (62.22%), Query Frame = 2
Query:   89 ESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            E   ++ L  D+Y  +CP A  II   +++ +N    +   +IRL FHDCF+ GCD S+LLD    D +  SEK   + N S +GF+V+DA+K+ LE+ CPG+VSCAD+L +A+ ++V ++GGP + +  GR+D   A R  A+  LP P  TL ++  RF+  G N+  + V+L GAH+
Sbjct:   61 EDIDRSYLHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDA---DEAHTSEK-DASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNER-ETVSLFGAHS 235          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.450e-32
Identity = 76/173 (43.93%), Postives = 108/173 (62.43%), Query Frame = 2
Query:  110 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            L+  +Y  +CP A  I+   + NA  +D  + A LIR+ FHDCF+ GCD SILLD+  ++T+   EK S AN  S RG+E++D  K  +E+ CPG+VSCADI+A+A+  +V  +GGP + +P GR DG+  ++    +NLP+PF     L   F   G     D+VALSGAHT
Sbjct:   26 LSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTA---EKDSPANL-SLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQ-DVVALSGAHT 192          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.118e-32
Identity = 78/175 (44.57%), Postives = 104/175 (59.43%), Query Frame = 2
Query:  110 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMAN-NNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRT-ANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            L+ +FY   CP   NII   L+  F  DI + A+++R+HFHDCFV GC+ S+LL   A   S   E+ S+ N     + F V++ ++A ++  C  +VSC+DILA+A+  SV LSGGP + VPLGRRD    A++     NLP PF     L   F N  LN  TDLVALSG HT
Sbjct:   44 LSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLL---AGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLN-ITDLVALSGGHT 214          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.297e-32
Identity = 79/177 (44.63%), Postives = 107/177 (60.45%), Query Frame = 2
Query:   98 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S+A L   +Y+ +CP A  IIL  ++NA   D ++ A L+R+ FHDCF+ GCD SILLD+  ++    +EK    N  S R F V++  K  LE ACP  VSCAD++AIA+   V LSGGP W+V  GR+DG T +R+   +NLP P   +  L   F   GL+   D+V LSG HT
Sbjct:   22 SEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSN---QAEKDGPPNI-SVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDG-TISRANETRNLPPPTFNVSQLIQSFAARGLSVK-DMVTLSGGHT 192          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.297e-32
Identity = 76/158 (48.10%), Postives = 104/158 (65.82%), Query Frame = 2
Query:  158 ILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            + GV+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  NNNS RGFEV+   K ++  +CP I VSCADILAIA+  S+   GG ++TV LGR D  TAN S A   LP P   L +   +F++       ++VAL+GAHT
Sbjct:   85 VKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVR-EMVALAGAHT 239          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.214e-31
Identity = 80/175 (45.71%), Postives = 112/175 (64.00%), Query Frame = 2
Query:  107 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            QLTP+     C    + +  V+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  N NSARG+EV+   K ++ + CP + VSCADILAIA+  SV   GG +++V LGR D RTAN S A   LP PF  L +   +F++       ++VAL+GAHT
Sbjct:   75 QLTPE----AC--VFSAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFT-LREMVALAGAHT 240          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.586e-31
Identity = 81/175 (46.29%), Postives = 110/175 (62.86%), Query Frame = 2
Query:  107 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            QLTP+     C    + + GV+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  N NSARG+EV+   K ++   CP I VSCADILAIA+  SV   GG ++ V LGR D RTAN + A   LP PF  L +   +F +       ++VAL+GAHT
Sbjct:   74 QLTPE----AC--VFSAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFT-LREMVALAGAHT 239          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.705e-31
Identity = 78/169 (46.15%), Postives = 99/169 (58.58%), Query Frame = 2
Query:  122 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            FY   C N  +I+  V+Q+   S       ++R+HFHDCFV+GCDGS+LL   A +TS    + +   N S RGFEV++  KA LE ACP  VSCADIL +A+  +V L+GG  W VPLGR DGR +  S  D NLP P  ++   K  F    LN   DLV L G HT
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL---AGNTS----ERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQAS--DVNLPGPSDSVAKQKQDFAAKTLN-TLDLVTLVGGHT 199          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.290e-30
Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            SSS A+L+ +FY  +CP A  I+   +++A +SD  +   L+RL FHDCFV GCDGS+L+     + S          N S  GF V++++K  LE  CPG VSCADIL +A+  +V   GGP   +P GRRDGR +  +    N+     T+D +   F++ GL+ + DLV LSGAHT
Sbjct:   25 SSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSDPG-------NASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVH-DLVVLSGAHT 195          
The following BLAST results are available for this feature:
BLAST of CF836145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER56_ARATH9.933e-3446.15Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER48_ARATH1.297e-3340.56Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER47_ARATH5.450e-3243.93Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER12_ARATH7.118e-3244.57Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER66_ARATH9.297e-3244.63Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER2_SOLLC9.297e-3248.10Suberization-associated anionic peroxidase 2 OS=So... [more]
PER1_SOLLC1.214e-3145.71Suberization-associated anionic peroxidase 1 OS=So... [more]
PERX_SOLTU1.586e-3146.29Suberization-associated anionic peroxidase OS=Sola... [more]
PER69_ARATH2.705e-3146.15Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER18_ARATH2.290e-3041.90Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836145 ID=CF836145; Name=CF836145; organism=Citrus sinensis; type=EST; length=632bp
CAACACTCACTACATTTCTCTTCAAAGGAAAATGTCTCCTCTTCGTTATC
TTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACGAATCATCATCT
CAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGCATC
AAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCCGAA
TCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAACGGC
TGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCATAGA
CAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCGAAG
TTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATTGTT
TCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTTGTC
AGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGACAG
CGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACTCTT
GATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATACTGA
TCTGGTTGCACTCTCCGGCGCTCACACTTTTG
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