CF836145

Overview
NameCF836145
Unique NameCF836145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.101e-30
Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = 2
Query:  167 VLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            ++  A  ++ R+ ASLIRLHFHDCFV+GCDG ILL++ AN T    E+ + AN+NS RGF V+D  K   ++ C    VSCAD+LAIA+  +       ++ + LGR+D RTAN + A+  LP PF  L +   +F + G N   ++V L+GAHT
Sbjct:   79 IVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFT---GEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHT 229          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.101e-30
Identity = 74/175 (42.29%), Postives = 102/175 (58.29%), Query Frame = 2
Query:  104 AQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            AQL   FY  TCP A +I+  V+ N ++ +  +TA+L+R+ FHDC V GCD S+L+D     T   SEK S+  N   RGFE++D  K  LE  CP  VSCADI+ IA+  S+ L+GGP + V  GRRDG  +N S  D  L  P  ++      F ++G N +T +  + G HT
Sbjct:   20 AQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPT---TERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPS--DVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHT 188          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.101e-30
Identity = 76/180 (42.22%), Postives = 103/180 (57.22%), Query Frame = 2
Query:   98 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSA-RGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S AQL  DFY  TCPN   I+   +Q           + +RL+FHDCFVNGCD S++   +A+  +  +EK    N + A  GF+ V   K A+++   C   VSCADIL +A+   VNL+GGP + V LGRRDG +++ S     LP P   L+ L   F   GL+ N D++ALSGAHT
Sbjct:   23 SSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVM---IASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPN-DMIALSGAHT 198          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.101e-30
Identity = 76/187 (40.64%), Postives = 106/187 (56.68%), Query Frame = 2
Query:   86 DESSSQAQLTP----DFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPG-IVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRT-ANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            D ++ Q  L P    DFY  +CP A +I+   +Q+A   D+ + A L+RLHFHDCFV GCD S+LLD  A          ++    +A  F+ ++ +   L   C G +VSC+D+LA+A+  SV +SGGPS+ VPLGRRD  + A +      LP P   +  L    + + L D TDLVALSG HT
Sbjct:   29 DGNARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTA--FKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINL-DATDLVALSGGHT 212          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.663e-30
Identity = 73/180 (40.56%), Postives = 104/180 (57.78%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSE-KFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            + S AQL+ ++Y +TCP+   I+   +   F   +    + +R+ FHDCFV GCD S+ + +   D   D++   S+A +    GF+ V   K A+ES CPG+VSCADILA+A+   V L GGP + V LGRRDG  +  S     LP P   +  L   F + GL+  TD++ALSGAHT
Sbjct:   26 AESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENEDAEKDADDNKSLAGD----GFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLS-LTDMIALSGAHT 200          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.702e-30
Identity = 75/181 (41.44%), Postives = 103/181 (56.91%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S   AQL   FY  +CPN   I+   ++  F        + +RL FHDCFV GCD SI++ + +     D    S+A +    GF+ V   K A++S   C   VSCADILA+A+ + V L+GGPS+ V LGRRDGR + ++     LP P   L+ L G F+  GL+  TD++ALSGAHT
Sbjct:   21 SCVSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSERDHPDD--MSLAGD----GFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLS-QTDMIALSGAHT 194          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.939e-29
Identity = 71/178 (39.89%), Postives = 104/178 (58.43%), Query Frame = 2
Query:   95 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            ++++ LT DFY+ +CP   +II   + N   S     A+ +RL FHDCF NGCD S+L+ + A +T+      +++      GF+VV   K ALE ACP  VSC+DI+A+A    +   GGP + + LGRRD RT+  SL    LP P   +  L  +F++ G +   ++VALSGAHT
Sbjct:   27 AAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGD--GFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVALSGAHT 201          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.939e-29
Identity = 72/178 (40.45%), Postives = 105/178 (58.99%), Query Frame = 2
Query:   95 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            +S A L+ +FY ++C  A  ++   +++A +SD  I   L+RL FHDCFV GCD S+L+         +S + S   N S  GF V+D  K A+E+ CP  VSCADI+A+A+  +V  +GGP   +P GRRDG+ +  +    N+     TLD +   F++ GL+   DLV LSGAHT
Sbjct:   24 TSSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQG-------NSTEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQ-DLVVLSGAHT 193          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.532e-29
Identity = 80/182 (43.96%), Postives = 107/182 (58.79%), Query Frame = 2
Query:   89 ESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIAS-EQSVNLSGGP-SWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            ++S    L   +Y  TCP A  I+   ++ A   +    A++IR+ FHDCFV GCD S+LLD      S   EK +  NN S RGFE++DA+K ALE+ACPG+VSCADI+A A+ + S  LS G  S+ +P GR DG  +N S + + L  P   L  L   F   G++   DLV LSGAHT
Sbjct:   28 QASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD--PTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMS-LEDLVVLSGAHT 206          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.307e-29
Identity = 77/181 (42.54%), Postives = 102/181 (56.35%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            SS  AQL  +FY  +CPN   I+   ++  F        + +RL FHDCFV GCD SILL + +     D +  S+A +    GF+ V   K AL+    C   VSCADILA+A+   V L+GGP++ V LGRRDGR +  +    +LP P   LD L   F   GL+  TD++ALSGAHT
Sbjct:   19 SSVFAQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPSEKDHPDDK--SLAGD----GFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLS-QTDMIALSGAHT 192          
The following BLAST results are available for this feature:
BLAST of CF836145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PERN_IPOBA5.101e-3044.52Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER8_ARATH5.101e-3042.29Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER51_ARATH5.101e-3042.22Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER1_SORBI5.101e-3040.64Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER55_ARATH6.663e-3040.56Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER45_ARATH8.702e-3041.44Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER63_ARATH1.939e-2939.89Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER46_ARATH1.939e-2940.45Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER2_MAIZE2.532e-2943.96Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER16_ARATH3.307e-2942.54Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836145 ID=CF836145; Name=CF836145; organism=Citrus sinensis; type=EST; length=632bp
CAACACTCACTACATTTCTCTTCAAAGGAAAATGTCTCCTCTTCGTTATC
TTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACGAATCATCATCT
CAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGCATC
AAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCCGAA
TCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAACGGC
TGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCATAGA
CAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCGAAG
TTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATTGTT
TCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTTGTC
AGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGACAG
CGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACTCTT
GATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATACTGA
TCTGGTTGCACTCTCCGGCGCTCACACTTTTG
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