CF836145

Overview
NameCF836145
Unique NameCF836145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.621e-29
Identity = 69/178 (38.76%), Postives = 106/178 (59.55%), Query Frame = 2
Query:   95 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            ++Q++LT +FY+ TCP   +II   + N   ++    A++IRL FHDCF NGCD S+L+ + A +T+      +++      GF+V+   K ALE ACP  VSC+DI+++A+   +   GGP + V LGRRD RT+  SL    LP P   +  +  +F + G     ++VALSGAH+
Sbjct:   16 TAQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGD--GFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHS 190          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.641e-28
Identity = 71/169 (42.01%), Postives = 101/169 (59.76%), Query Frame = 2
Query:  122 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            +Y + C N  +I+  V+++ + ++      ++R+HFHDCFV GCD S+LL         +SE+ ++ N  S RGF V++  K  LE ACP  VSCADILA+A+   V+L+GGP W VPLGR DGR +  S  +  LP P  ++ + K RF    LN   DLV L+  HT
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLL------AGPNSERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLN-TQDLVVLAAGHT 196          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.641e-28
Identity = 70/177 (39.55%), Postives = 101/177 (57.06%), Query Frame = 2
Query:  101 QAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLS-GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            + +L  +FY+ +CP A +I+  ++     ++  +   L+R+H+HDCFV GCD S+LLD+VA     + E      N S  GFE++D +K  LE  CP  VSCADIL +A+  +V+     P W V  GR DGR +  + A ++LP+       L+  F    L D  DLVALSGAHT
Sbjct:   43 EGKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKE---ARPNLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVALSGAHT 215          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.656e-28
Identity = 74/176 (42.05%), Postives = 103/176 (58.52%), Query Frame = 2
Query:  107 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGG--PSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            QL   FY+  C N  NI+  V+  AF  D  I  ++IRL+FHDCF NGCD S+LLD        +SEK   + N S RG+EV+D +K+A+E  C  +VSCADI+A+A+   V L+ G    + +P GR DG+ ++  L D  LP+P  T+     +F    L+ N D+V L G HT
Sbjct:   27 QLRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLD------GSNSEK-KASPNLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVD--LPSPKMTVAETAAKFDQRKLSLN-DMVLLLGGHT 192          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.144e-28
Identity = 71/181 (39.23%), Postives = 101/181 (55.80%), Query Frame = 2
Query:   98 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTS--IDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S AQL  +FY  +CPN   I+   +Q           + +RL+FHDCFVNGCD S+++ +  N+ +     E  S+A +    GF+ V   K AL++   C   VSCADIL +A+   VNL+GGP + V LGR DG ++  +     LP P   ++ L   F   GL+ N D++ALSGAHT
Sbjct:   23 SSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGD----GFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLN-DMIALSGAHT 198          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.144e-28
Identity = 71/182 (39.01%), Postives = 100/182 (54.95%), Query Frame = 2
Query:   95 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDS--EKFSMANNNSARGFEVVDAMKAALES--ACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            ++ AQL+  FY+ TCPN   I+   +Q           + +RL FHDCFVNGCD S+++ +   + +     +  S+A +    GF+VV   K AL+S  +C   VSCADIL +A+   V  +GGPS+ V LGR DG  +  S  + NLP P   +D L   FT   L    D++ALS AHT
Sbjct:   22 TTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGD----GFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQE-DMIALSAAHT 198          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.536e-26
Identity = 69/155 (44.52%), Postives = 97/155 (62.58%), Query Frame = 2
Query:  167 VLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            V+  A N++ R+ ASLIRL FHDCFV+GCD  +LL++ A  T    E+ +  NNNS RGF V++  K  +++  P + VSCADIL+IA+  S     G ++TV LGR+D RTAN + A+  L  P + L     +F   G N  T++VAL G+HT
Sbjct:   78 VVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFT---GEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFN-GTEMVALLGSHT 228          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.006e-26
Identity = 70/179 (39.11%), Postives = 103/179 (57.54%), Query Frame = 2
Query:   98 SQAQLTPDFYNT--TCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            S  +LT  +Y    TC NA N +   ++  + +D  I   L+RL + DCFV+GCD S+LL+        +SEK +   N    GF ++D +K  LE  CPG+VSCADIL +A+  +V+L+G PS+ V  GRRDG T+++   D  LP+P  + D     F + GLN   D+  L G+H+
Sbjct:   31 SMQKLTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGP------NSEKMA-PQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLN-VLDMATLLGSHS 199          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.006e-26
Identity = 64/174 (36.78%), Postives = 92/174 (52.87%), Query Frame = 2
Query:  107 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            +L+ D+Y+  CP    ++  V    F        + IRL FHDCFV GCDGSIL++       +   +          GF+ +   KA +ES CP +VSC+DILAIA+   ++L+GGP + V  GR DG+ +       N+P    T+D L   F + GL    +LV LSG+HT
Sbjct:   41 ELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVE-ELVVLSGSHT 213          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.623e-26
Identity = 68/165 (41.21%), Postives = 95/165 (57.58%), Query Frame = 2
Query:  134 TCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 628
            TC +A   I   ++  + +D  I   L+RL + DC VNGCDGSILL         +SE+ +   N    GF ++D +K  LES CPG+VSCADIL +A+  +V+++G PS+ V  GRRDG T N    D  LP+P  ++D     F + GL D  D+  L GAH+
Sbjct:   45 TCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGP------NSER-TAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGL-DVLDMTTLLGAHS 199          
The following BLAST results are available for this feature:
BLAST of CF836145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER31_ARATH9.621e-2938.76Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER70_ARATH1.641e-2842.01Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER24_ARATH1.641e-2839.55Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER60_ARATH3.656e-2842.05Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER50_ARATH8.144e-2839.23Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER35_ARATH8.144e-2839.01Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PERA_IPOBA1.536e-2644.52Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER26_ARATH2.006e-2639.11Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER19_ARATH2.006e-2636.78Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER61_ARATH7.623e-2641.21Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836145 ID=CF836145; Name=CF836145; organism=Citrus sinensis; type=EST; length=632bp
CAACACTCACTACATTTCTCTTCAAAGGAAAATGTCTCCTCTTCGTTATC
TTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACGAATCATCATCT
CAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGCATC
AAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCCGAA
TCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAACGGC
TGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCATAGA
CAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCGAAG
TTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATTGTT
TCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTTGTC
AGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGACAG
CGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACTCTT
GATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATACTGA
TCTGGTTGCACTCTCCGGCGCTCACACTTTTG
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