CF836154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836154 vs. ExPASy Swiss-Prot
Match: RAEP_CANAL (Rab proteins geranylgeranyltransferase component A OS=Candida albicans GN=MRS6 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12 Identity = 51/161 (31.68%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 87 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWK-----------RFR-------GNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVY-NKGKVHKVPA-TDMEALKSPLMGIFEKRRARKFFIYV 509 DV+++GTGL+E IL+ LS G +VLH+D N YYG S+L + QL K +F+ G +Q + +S+DY +D+ PK + L+ +LI + V +YL F+++ V+ N KV A T + + + KR KF ++ Sbjct: 5 DVLIIGTGLQESILAAALSWQGTQVLHIDSNTYYGDSCSTLTIEQLKKWCGDVNSGKIHQFQDAQIYIPGGKQSNQY--TSKDYGIDLTPKIMFCQSDLLSLLIKSRVYRYLEFQSLSNFHVFENDDFQQKVNATTKQDIFTDKSLSLMTKRYLMKFLKFL 163
BLAST of CF836154 vs. ExPASy Swiss-Prot
Match: RAE2_HUMAN (Rab proteins geranylgeranyltransferase component A 2 OS=Homo sapiens GN=CHML PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12 Identity = 41/160 (25.62%), Postives = 83/160 (51.88%), Query Frame = 3 Query: 276 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPL 755 R +N+D++ K + + G L+ +LI +DV++Y+ FK V + +GKV +VP + + S + + EKR KF + +Y+++ E + + E + L N F+ H++A+ + + +D + K + + + RF G +P+++PL Sbjct: 227 RRFNIDLVSKLLYSQGLLIDLLIKSDVSRYVEFKNVTRILAFREGKVEQVPCSRADVFNSKELTMVEKRMLMKFLTFCLEYEQH---PDEYQAFRQCSFSEYLKTKKLTPNLQHFVLHSIAMTSES---SCTTIDGLNATKNFLQCLGRF-GNTPFLFPL 379
BLAST of CF836154 vs. ExPASy Swiss-Prot
Match: RAE1_MOUSE (Rab proteins geranylgeranyltransferase component A 1 OS=Mus musculus GN=Chm PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12 Identity = 41/160 (25.62%), Postives = 83/160 (51.88%), Query Frame = 3 Query: 276 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPL 755 R +N+D++ K + + G L+ +LI ++V++Y FK + + +G V +VP + + S + + EKR KF + +Y E+ P ++ + T T E + L N F+ H++A+ + +D +K K + + + R+ G +P+++PL Sbjct: 237 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEY-EDHPDEYKAYEET--TFSEYLKTQKLTPNLQYFVLHSIAMTSE---TTSSTVDGLKATKKFLQCLGRY-GNTPFLFPL 389
BLAST of CF836154 vs. ExPASy Swiss-Prot
Match: RAE1_HUMAN (Rab proteins geranylgeranyltransferase component A 1 OS=Homo sapiens GN=CHM PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12 Identity = 40/160 (25.00%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 276 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPL 755 R +N+D++ K + + G L+ +LI ++V++Y FK + + +G+V +VP + + S + + EKR KF + +Y E P ++G + +T E + L N + H++A+ + +D +K K + + R+ G +P+++PL Sbjct: 225 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCMEY-EKYPDEYKGYE--EITFYEYLKTQKLTPNLQYIVMHSIAMTSETA---SSTIDGLKATKNFLHCLGRY-GNTPFLFPL 377
BLAST of CF836154 vs. ExPASy Swiss-Prot
Match: RAE1_RAT (Rab proteins geranylgeranyltransferase component A 1 OS=Rattus norvegicus GN=Chm PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11 Identity = 40/162 (24.69%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 276 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDE--NDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPL 755 R +N+D++ + + + G L+ +LI ++V++Y FK + + +G V +VP + + S + + EKR KF + +Y+E ++ + +EG T E + L N F+ H++A+ + +D +K K + + + R+ G +P+++PL Sbjct: 222 RRFNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEG-----TTFSEYLKTQKLTPNLQYFVLHSIAMTSE---TTSCTVDGLKATKKFLQCLGRY-GNTPFLFPL 374 The following BLAST results are available for this feature:
BLAST of CF836154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836154 ID=CF836154; Name=CF836154; organism=Citrus sinensis; type=EST; length=755bpback to top |